FFCP PHASE1:Hg19::chr5:134375415..134375475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000511256_5end | |association_with_transcript=-29bp_to_ENST00000511256_5end | ||
|cluster_id=chr5:134375415..134375475,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_ENST00000511256_5end | |description=CAGE_peak_1_at_ENST00000511256_5end | ||
|id=chr5:134375415..134375475,- | |id=chr5:134375415..134375475,- | ||
|ontology_enrichment_celltype=CL:0002076!1.62e-10!43;CL:0002251!4.34e-10!21;CL:0000153!4.33e-08!9;CL:0000447!4.33e-08!9;CL:0000223!1.96e-07!59;CL:0000499!2.15e-07!27;CL:0000667!8.78e-07!6;CL:0000058!8.78e-07!6;CL:0000138!8.78e-07!6 | |ontology_enrichment_celltype=CL:0002076!1.62e-10!43;CL:0002251!4.34e-10!21;CL:0000153!4.33e-08!9;CL:0000447!4.33e-08!9;CL:0000223!1.96e-07!59;CL:0000499!2.15e-07!27;CL:0000667!8.78e-07!6;CL:0000058!8.78e-07!6;CL:0000138!8.78e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.18e-14;9!CL:0000447;2.18e-14;9!CL:0000138;1.18e-11;6!CL:0002623;2.02e-09;3!CL:0002504;5.65e-09;3!CL:1000279;5.65e-09;3!CL:1000280;5.65e-09;3!CL:0000327;3.43e-08;15!CL:0000499;5.81e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.03e-14,9;CL:0000447,2.03e-14,9;CL:0000058,1.13e-11,6;CL:0000138,1.13e-11,6;CL:0002623,1.93e-09,3;CL:0002504,6.40e-09,3;CL:1000279,6.40e-09,3;CL:1000280,6.40e-09,3;CL:0000327,3.30e-08,15;CL:0000499,5.67e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!7.19e-24!155;UBERON:0001555!7.19e-24!155;UBERON:0007026!7.19e-24!155;UBERON:0004119!1.25e-22!169;UBERON:0000925!1.25e-22!169;UBERON:0006595!1.25e-22!169;UBERON:0000161!1.34e-22!35;UBERON:0004921!7.67e-21!129;UBERON:0004185!7.67e-21!129;UBERON:0001046!1.16e-16!19;UBERON:0000077!2.06e-14!130;UBERON:0000162!5.50e-13!14;UBERON:0001353!5.50e-13!14;UBERON:0000163!5.50e-13!14;UBERON:0006866!5.50e-13!14;UBERON:0000164!5.50e-13!14;UBERON:0000931!5.50e-13!14;UBERON:0000059!1.04e-12!11;UBERON:0000160!1.89e-12!27;UBERON:0004122!6.85e-12!15;UBERON:0002367!1.45e-11!11;UBERON:0010147!1.45e-11!11;UBERON:0009846!1.45e-11!11;UBERON:0003353!1.45e-11!11;UBERON:0004902!1.45e-11!11;UBERON:0003820!1.45e-11!11;UBERON:0009847!1.45e-11!11;UBERON:0000166!2.04e-11!21;UBERON:0000165!2.07e-11!28;UBERON:0000930!2.07e-11!28;UBERON:0005409!7.16e-11!35;UBERON:0003937!2.20e-10!12;UBERON:0005399!2.20e-10!12;UBERON:0001155!2.45e-10!9;UBERON:0001044!2.58e-10!6;UBERON:0003293!2.58e-10!6;UBERON:0003294!2.58e-10!6;UBERON:0010047!2.58e-10!6;UBERON:0000167!2.58e-10!6;UBERON:0000078!4.09e-10!18;UBERON:0003101!3.11e-09!22;UBERON:0000079!3.11e-09!22;UBERON:0000481!4.13e-09!347;UBERON:0001004!4.30e-08!72;UBERON:0003102!4.44e-08!95;UBERON:0005153!4.83e-08!37;UBERON:0001444!7.23e-08!48;UBERON:0003104!6.52e-07!238;UBERON:0009142!6.52e-07!238 | |ontology_enrichment_uberon=UBERON:0001007!7.19e-24!155;UBERON:0001555!7.19e-24!155;UBERON:0007026!7.19e-24!155;UBERON:0004119!1.25e-22!169;UBERON:0000925!1.25e-22!169;UBERON:0006595!1.25e-22!169;UBERON:0000161!1.34e-22!35;UBERON:0004921!7.67e-21!129;UBERON:0004185!7.67e-21!129;UBERON:0001046!1.16e-16!19;UBERON:0000077!2.06e-14!130;UBERON:0000162!5.50e-13!14;UBERON:0001353!5.50e-13!14;UBERON:0000163!5.50e-13!14;UBERON:0006866!5.50e-13!14;UBERON:0000164!5.50e-13!14;UBERON:0000931!5.50e-13!14;UBERON:0000059!1.04e-12!11;UBERON:0000160!1.89e-12!27;UBERON:0004122!6.85e-12!15;UBERON:0002367!1.45e-11!11;UBERON:0010147!1.45e-11!11;UBERON:0009846!1.45e-11!11;UBERON:0003353!1.45e-11!11;UBERON:0004902!1.45e-11!11;UBERON:0003820!1.45e-11!11;UBERON:0009847!1.45e-11!11;UBERON:0000166!2.04e-11!21;UBERON:0000165!2.07e-11!28;UBERON:0000930!2.07e-11!28;UBERON:0005409!7.16e-11!35;UBERON:0003937!2.20e-10!12;UBERON:0005399!2.20e-10!12;UBERON:0001155!2.45e-10!9;UBERON:0001044!2.58e-10!6;UBERON:0003293!2.58e-10!6;UBERON:0003294!2.58e-10!6;UBERON:0010047!2.58e-10!6;UBERON:0000167!2.58e-10!6;UBERON:0000078!4.09e-10!18;UBERON:0003101!3.11e-09!22;UBERON:0000079!3.11e-09!22;UBERON:0000481!4.13e-09!347;UBERON:0001004!4.30e-08!72;UBERON:0003102!4.44e-08!95;UBERON:0005153!4.83e-08!37;UBERON:0001444!7.23e-08!48;UBERON:0003104!6.52e-07!238;UBERON:0009142!6.52e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.41e-36;33!UBERON:0000160;7.78e-26;17!UBERON:0000059;7.96e-23;11!UBERON:0005409;1.49e-22;22!UBERON:0001155;2.57e-18;9!UBERON:0001044;8.03e-18;6!UBERON:0003293;8.03e-18;6!UBERON:0003294;8.03e-18;6!UBERON:0010047;8.03e-18;6!UBERON:0003408;8.03e-18;6!UBERON:0000167;8.03e-18;6!UBERON:0001555;9.75e-18;54!UBERON:0001041;1.22e-15;14!UBERON:0000165;1.65e-10;28!UBERON:0001007;5.03e-09;81!UBERON:0004907;6.60e-09;5!UBERON:0000161;1.13e-08;19!UBERON:0000166;1.13e-08;19!UBERON:0002367;1.92e-08;11!UBERON:0010147;1.92e-08;11!UBERON:0003937;1.11e-07;12!UBERON:0005399;1.11e-07;12!UBERON:0001829;2.92e-07;2!UBERON:0000007;3.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.81e-26,17;UBERON:0004921,3.44e-25,118;UBERON:0000059,1.03e-22,11;UBERON:0001007,1.99e-22,145;UBERON:0001555,1.99e-22,145;UBERON:0007026,1.99e-22,145;UBERON:0000161,2.25e-21,36;UBERON:0005409,1.63e-19,25;UBERON:0004119,2.58e-19,160;UBERON:0000925,2.58e-19,160;UBERON:0006595,2.58e-19,160;UBERON:0001155,2.74e-18,9;UBERON:0001046,3.55e-18,19;UBERON:0001044,7.71e-18,6;UBERON:0003293,7.71e-18,6;UBERON:0003294,7.71e-18,6;UBERON:0010047,7.71e-18,6;UBERON:0000167,7.71e-18,6;UBERON:0011216,3.91e-13,223;UBERON:0000166,1.41e-11,22;UBERON:0000162,1.93e-11,14;UBERON:0001353,1.93e-11,14;UBERON:0000163,1.93e-11,14;UBERON:0006866,1.93e-11,14;UBERON:0000164,1.93e-11,14;UBERON:0000931,1.93e-11,14;UBERON:0004122,1.40e-10,15;UBERON:0003408,2.30e-10,10;UBERON:0000165,4.84e-10,29;UBERON:0000930,4.84e-10,29;UBERON:0004907,7.90e-09,5;UBERON:0002367,2.20e-08,11;UBERON:0010147,2.20e-08,11;UBERON:0009846,2.20e-08,11;UBERON:0003353,2.20e-08,11;UBERON:0004902,2.20e-08,11;UBERON:0003820,2.20e-08,11;UBERON:0009847,2.20e-08,11;UBERON:0003102,3.74e-08,99;UBERON:0000153,6.95e-08,62;UBERON:0007811,6.95e-08,62;UBERON:0003937,1.26e-07,12;UBERON:0005399,1.26e-07,12;UBERON:0001829,2.93e-07,2;UBERON:0000007,3.11e-07,2;UBERON:0000033,9.37e-07,56 | |||
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|short_description=p1@ENST00000511256 | |short_description=p1@ENST00000511256 | ||
}} | }} |
Latest revision as of 09:56, 30 July 2015
Short description: | p1@ENST00000511256 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000511256_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -29bp_to_ENST00000511256_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.03e-14 | 9 |
carbohydrate secreting cell | 2.03e-14 | 9 |
chondroblast | 1.13e-11 | 6 |
chondrocyte | 1.13e-11 | 6 |
acinar cell of salivary gland | 1.93e-09 | 3 |
enteric smooth muscle cell | 6.40e-09 | 3 |
smooth muscle cell of large intestine | 6.40e-09 | 3 |
smooth muscle cell of colon | 6.40e-09 | 3 |
extracellular matrix secreting cell | 3.30e-08 | 15 |
stromal cell | 5.67e-08 | 28 |