FFCP PHASE1:Hg19::chr5:138751193..138751196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:138751193..138751196,- | |||
|coexpression_cluster_id=C513 | |coexpression_cluster_id=C513 | ||
|description=CAGE_peak_at_chr5:138751193..138751196,- | |description=CAGE_peak_at_chr5:138751193..138751196,- | ||
|id=chr5:138751193..138751196,- | |id=chr5:138751193..138751196,- | ||
|ontology_enrichment_celltype=CL:0000307;2.40e-66;3!CL:0002202;5.13e-23;9!CL:0002632;5.13e-23;9!CL:0002368;2.63e-16;13 | |ontology_enrichment_celltype=CL:0000068!2.00e-15!3;CL:0000069!2.00e-15!3;CL:0000307!2.00e-15!3;CL:0000377!2.00e-15!3;CL:0002202!1.18e-13!9;CL:0002632!1.18e-13!9;CL:0002368!4.05e-13!13;CL:0002328!1.11e-07!3;CL:0002076!1.64e-07!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0000307;2.40e-66;3!CL:0002202;5.13e-23;9!CL:0002632;5.13e-23;9!CL:0002368;2.63e-16;13 | ||
|ontology_enrichment_disease=DOID:2355;3.99e-50;1!DOID:74;7.14e-26;2!DOID:1287;1.13e-13;4 | |ontology_enrichment_celltype_v019_2=CL:0000068,1.71e-66,3;CL:0000069,1.71e-66,3;CL:0000307,1.71e-66,3;CL:0000377,1.71e-66,3;CL:0002202,4.59e-23,9;CL:0002632,4.59e-23,9;CL:0002368,2.43e-16,13 | ||
|ontology_enrichment_uberon=UBERON:0003126;3.16e-29;7!UBERON:0001005;3.16e-29;7!UBERON:0007196;2.75e-14;15!UBERON:0001558;2.75e-14;15!UBERON:0000072;3.47e-07;37!UBERON:0005178;3.48e-07;34!UBERON:0002224;3.48e-07;34 | |ontology_enrichment_development_v019=CL:0000377;2.40e-66;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;3.99e-50;1!DOID:74;7.14e-26;2!DOID:1287;1.13e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.99e-50,1;DOID:74,7.14e-26,2;DOID:1287,1.13e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007196!1.15e-08!14;UBERON:0001558!1.15e-08!14;UBERON:0004815!1.11e-07!3;UBERON:0002031!1.11e-07!3;UBERON:0003126!7.47e-07!7;UBERON:0001005!7.47e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;3.16e-29;7!UBERON:0001005;3.16e-29;7!UBERON:0007196;2.75e-14;15!UBERON:0001558;2.75e-14;15!UBERON:0000072;3.47e-07;37!UBERON:0005178;3.48e-07;34!UBERON:0002224;3.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.74e-29,7;UBERON:0001005,2.74e-29,7;UBERON:0007196,2.58e-14,15;UBERON:0001558,2.58e-14,15;UBERON:0005178,6.75e-07,34;UBERON:0002224,6.75e-07,34;UBERON:0005181,9.98e-07,35 | |||
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|short_description=p@chr5:138751193..138751196,- | |short_description=p@chr5:138751193..138751196,- | ||
}} | }} |
Latest revision as of 10:22, 30 July 2015
Short description: | p@chr5:138751193..138751196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:138751193..138751196, - |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.71e-66 | 3 |
branched duct epithelial cell | 1.71e-66 | 3 |
tracheal epithelial cell | 1.71e-66 | 3 |
tracheoblast | 1.71e-66 | 3 |
epithelial cell of tracheobronchial tree | 4.59e-23 | 9 |
epithelial cell of lower respiratory tract | 4.59e-23 | 9 |
respiratory epithelial cell | 2.43e-16 | 13 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.74e-29 | 7 |
respiratory airway | 2.74e-29 | 7 |
tracheobronchial tree | 2.58e-14 | 15 |
lower respiratory tract | 2.58e-14 | 15 |
thoracic cavity element | 6.75e-07 | 34 |
thoracic cavity | 6.75e-07 | 34 |
thoracic segment organ | 9.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.99e-50 | 1 |
hematopoietic system disease | 7.14e-26 | 2 |
cardiovascular system disease | 1.13e-13 | 4 |