FFCP PHASE1:Hg19::chr5:147618109..147618126,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000513133_5end | |association_with_transcript=-6bp_to_ENST00000513133_5end | ||
|cluster_id=chr5:147618109..147618126,+ | |||
|coexpression_cluster_id=C1583 | |coexpression_cluster_id=C1583 | ||
|description=CAGE_peak_3_at_ENST00000513133_5end | |description=CAGE_peak_3_at_ENST00000513133_5end | ||
|id=chr5:147618109..147618126,+ | |id=chr5:147618109..147618126,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.29e-08,2;CL:0000066,8.97e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.05e-38;29 | |||
|ontology_enrichment_disease=DOID:305!1.75e-12!106;DOID:0050687!4.99e-10!143;DOID:162!6.74e-08!235;DOID:14566!1.15e-07!239;DOID:4362!1.41e-07!5 | |ontology_enrichment_disease=DOID:305!1.75e-12!106;DOID:0050687!4.99e-10!143;DOID:162!6.74e-08!235;DOID:14566!1.15e-07!239;DOID:4362!1.41e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.89e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.07e-18,106;DOID:0050687,4.86e-13,143;DOID:4362,1.79e-12,5;DOID:162,1.82e-10,235;DOID:14566,3.21e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.75e-72!9;UBERON:0001557!5.97e-41!19;UBERON:0008947!4.73e-16!38;UBERON:0003258!4.73e-16!38;UBERON:0000072!5.25e-16!46;UBERON:0000065!1.11e-13!53;UBERON:0000002!9.16e-13!6;UBERON:0001560!9.16e-13!6;UBERON:0001004!1.19e-09!72;UBERON:0000077!1.29e-09!130;UBERON:0001301!2.55e-09!1;UBERON:0004921!3.97e-08!129;UBERON:0004185!3.97e-08!129;UBERON:0001041!4.02e-08!98;UBERON:0001007!1.35e-07!155;UBERON:0001555!1.35e-07!155;UBERON:0007026!1.35e-07!155;UBERON:0004119!9.13e-07!169;UBERON:0000925!9.13e-07!169;UBERON:0006595!9.13e-07!169;UBERON:0000063!9.40e-07!97 | |ontology_enrichment_uberon=UBERON:0001737!7.75e-72!9;UBERON:0001557!5.97e-41!19;UBERON:0008947!4.73e-16!38;UBERON:0003258!4.73e-16!38;UBERON:0000072!5.25e-16!46;UBERON:0000065!1.11e-13!53;UBERON:0000002!9.16e-13!6;UBERON:0001560!9.16e-13!6;UBERON:0001004!1.19e-09!72;UBERON:0000077!1.29e-09!130;UBERON:0001301!2.55e-09!1;UBERON:0004921!3.97e-08!129;UBERON:0004185!3.97e-08!129;UBERON:0001041!4.02e-08!98;UBERON:0001007!1.35e-07!155;UBERON:0001555!1.35e-07!155;UBERON:0007026!1.35e-07!155;UBERON:0004119!9.13e-07!169;UBERON:0000925!9.13e-07!169;UBERON:0006595!9.13e-07!169;UBERON:0000063!9.40e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.33e-125;9!UBERON:0001557;5.33e-125;9!UBERON:0000072;7.19e-28;37!UBERON:0000065;1.56e-23;44!UBERON:0001004;2.31e-12;65!UBERON:0000002;1.57e-10;6!UBERON:0001560;1.57e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.36e-125,9;UBERON:0001557,5.95e-59,19;UBERON:0008947,3.73e-29,38;UBERON:0003258,3.73e-29,38;UBERON:0000072,1.97e-23,47;UBERON:0000065,2.71e-20,54;UBERON:0001004,1.38e-14,74;UBERON:0001041,2.81e-12,87;UBERON:0000002,1.50e-10,6;UBERON:0001560,1.50e-10,6;UBERON:0004921,9.94e-09,118;UBERON:0001007,1.17e-08,145;UBERON:0001555,1.17e-08,145;UBERON:0007026,1.17e-08,145;UBERON:0001048,8.38e-08,160;UBERON:0004119,9.53e-08,160;UBERON:0000925,9.53e-08,160;UBERON:0006595,9.53e-08,160 | |||
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|short_description=p3@ENST00000513133 | |short_description=p3@ENST00000513133 | ||
}} | }} |
Latest revision as of 11:17, 30 July 2015
Short description: | p3@ENST00000513133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000513133_5end |
Coexpression cluster: | C1583_gall_Hep2_lung_cervical_mesothelioma_glassy_amniotic |
Association with transcript: | -6bp_to_ENST00000513133_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.29e-08 | 2 |
epithelial cell | 8.97e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.36e-125 | 9 |
upper respiratory tract | 5.95e-59 | 19 |
respiratory primordium | 3.73e-29 | 38 |
endoderm of foregut | 3.73e-29 | 38 |
segment of respiratory tract | 1.97e-23 | 47 |
respiratory tract | 2.71e-20 | 54 |
respiratory system | 1.38e-14 | 74 |
foregut | 2.81e-12 | 87 |
uterine cervix | 1.50e-10 | 6 |
neck of organ | 1.50e-10 | 6 |
subdivision of digestive tract | 9.94e-09 | 118 |
digestive system | 1.17e-08 | 145 |
digestive tract | 1.17e-08 | 145 |
primitive gut | 1.17e-08 | 145 |
primordium | 8.38e-08 | 160 |
endoderm-derived structure | 9.53e-08 | 160 |
endoderm | 9.53e-08 | 160 |
presumptive endoderm | 9.53e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.07e-18 | 106 |
cell type cancer | 4.86e-13 | 143 |
cervical cancer | 1.79e-12 | 5 |
cancer | 1.82e-10 | 235 |
disease of cellular proliferation | 3.21e-10 | 239 |