FFCP PHASE1:Hg19::chr5:150503936..150503952,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:150503936..150503952,- | |||
|coexpression_cluster_id=C3436 | |||
|description=CAGE_peak_at_chr5:150503936..150503952,- | |description=CAGE_peak_at_chr5:150503936..150503952,- | ||
|id=chr5:150503936..150503952,- | |id=chr5:150503936..150503952,- | ||
|ontology_enrichment_celltype=CL:0000945!1.79e-32!24;CL:0000826!1.79e-32!24;CL:0000542!1.46e-27!53;CL:0000051!1.46e-27!53;CL:0000838!7.72e-25!52;CL:0002087!1.64e-11!119;CL:0000738!1.67e-10!140;CL:0002031!1.45e-09!124;CL:0000037!8.01e-08!172;CL:0000566!8.01e-08!172;CL:0000946!2.50e-07!1;CL:0000786!2.50e-07!1;CL:0000980!2.50e-07!1;CL:0002032!2.81e-07!165;CL:0000837!2.81e-07!165;CL:0000988!3.51e-07!182 | |ontology_enrichment_celltype=CL:0000945!1.79e-32!24;CL:0000826!1.79e-32!24;CL:0000542!1.46e-27!53;CL:0000051!1.46e-27!53;CL:0000838!7.72e-25!52;CL:0002087!1.64e-11!119;CL:0000738!1.67e-10!140;CL:0002031!1.45e-09!124;CL:0000037!8.01e-08!172;CL:0000566!8.01e-08!172;CL:0000946!2.50e-07!1;CL:0000786!2.50e-07!1;CL:0000980!2.50e-07!1;CL:0002032!2.81e-07!165;CL:0000837!2.81e-07!165;CL:0000988!3.51e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.31e-52;24!CL:0000946;4.67e-21;1!CL:0000786;4.67e-21;1!CL:0000542;9.22e-16;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.46e-52,24;CL:0000826,4.46e-52,24;CL:0000838,2.16e-30,52;CL:0000542,8.16e-30,53;CL:0000051,8.16e-30,53;CL:0000946,2.82e-21,1;CL:0000786,2.82e-21,1;CL:0000980,2.82e-21,1;CL:0002087,1.92e-13,115;CL:0002031,7.18e-13,120;CL:0000785,2.47e-11,2;CL:0000955,2.47e-11,2;CL:0000818,2.47e-11,2;CL:0000954,2.47e-11,2;CL:0000816,2.47e-11,2;CL:0000738,2.58e-11,136;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000037,4.45e-09,168;CL:0000988,1.36e-08,177;CL:0000817,5.54e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;9.22e-16;53!CL:0000954;3.18e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.70e-27!10;DOID:2531!2.52e-09!51;DOID:0060083!2.52e-09!51;DOID:630!2.22e-07!1;DOID:0050177!2.22e-07!1;DOID:0050427!2.22e-07!1;DOID:12603!7.57e-07!1;DOID:2355!8.02e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.88e-21;1!DOID:0050177;1.88e-21;1!DOID:0050427;1.88e-21;1!DOID:0060058;2.47e-18;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.88e-21,1;DOID:0050177,1.88e-21,1;DOID:0050427,1.88e-21,1;DOID:0060058,2.47e-18,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.06e-19!7;UBERON:0002106!3.95e-17!3;UBERON:0004854!3.95e-17!3;UBERON:0009034!3.95e-17!3;UBERON:0002095!3.95e-17!3;UBERON:0004782!3.95e-17!3;UBERON:0003281!3.95e-17!3;UBERON:0009664!3.95e-17!3;UBERON:0002296!3.95e-17!3;UBERON:0005602!3.95e-17!3;UBERON:0001179!3.95e-17!3;UBERON:0006293!3.95e-17!3;UBERON:0002372!5.69e-07!1;UBERON:0001961!5.69e-07!1;UBERON:0001744!5.69e-07!1;UBERON:0001735!5.69e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.34e-08,3;UBERON:0004854,6.34e-08,3;UBERON:0009034,6.34e-08,3;UBERON:0002095,6.34e-08,3;UBERON:0004782,6.34e-08,3;UBERON:0003281,6.34e-08,3;UBERON:0009664,6.34e-08,3;UBERON:0002296,6.34e-08,3;UBERON:0005602,6.34e-08,3;UBERON:0001179,6.34e-08,3;UBERON:0006293,6.34e-08,3 | |||
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|short_description=p@chr5:150503936..150503952,- | |short_description=p@chr5:150503936..150503952,- | ||
}} | }} |
Latest revision as of 11:51, 30 July 2015
Short description: | p@chr5:150503936..150503952, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150503936..150503952, - |
Coexpression cluster: | C3436_xeroderma_hairy_b_B_acute_plasma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.46e-52 | 24 |
pro-B cell | 4.46e-52 | 24 |
lymphoid lineage restricted progenitor cell | 2.16e-30 | 52 |
lymphocyte | 8.16e-30 | 53 |
common lymphoid progenitor | 8.16e-30 | 53 |
antibody secreting cell | 2.82e-21 | 1 |
plasma cell | 2.82e-21 | 1 |
plasmablast | 2.82e-21 | 1 |
nongranular leukocyte | 1.92e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.18e-13 | 120 |
mature B cell | 2.47e-11 | 2 |
pre-B-II cell | 2.47e-11 | 2 |
transitional stage B cell | 2.47e-11 | 2 |
small pre-B-II cell | 2.47e-11 | 2 |
immature B cell | 2.47e-11 | 2 |
leukocyte | 2.58e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 161 |
hematopoietic stem cell | 4.45e-09 | 168 |
hematopoietic cell | 1.36e-08 | 177 |
precursor B cell | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.34e-08 | 3 |
gastrointestinal system mesentery | 6.34e-08 | 3 |
stomach region | 6.34e-08 | 3 |
mesentery | 6.34e-08 | 3 |
gastrointestinal system serosa | 6.34e-08 | 3 |
mesentery of stomach | 6.34e-08 | 3 |
gut mesentery | 6.34e-08 | 3 |
dorsal mesentery | 6.34e-08 | 3 |
dorsal mesogastrium | 6.34e-08 | 3 |
peritoneal cavity | 6.34e-08 | 3 |
spleen primordium | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.88e-21 | 1 |
monogenic disease | 1.88e-21 | 1 |
xeroderma pigmentosum | 1.88e-21 | 1 |
lymphoma | 2.47e-18 | 10 |