FFCP PHASE1:Hg19::chr5:153858046..153858049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:153858046..153858049,+ | |||
|coexpression_cluster_id=C360 | |coexpression_cluster_id=C360 | ||
|description=CAGE_peak_at_chr5:153858046..153858049,+ | |description=CAGE_peak_at_chr5:153858046..153858049,+ | ||
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|ontology_enrichment_celltype=CL:0000349!4.05e-47!3;CL:0002577!4.05e-47!3;CL:0002536!5.08e-09!2 | |ontology_enrichment_celltype=CL:0000349!4.05e-47!3;CL:0002577!4.05e-47!3;CL:0002536!5.08e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002577;5.20e-118;3!CL:0000349;1.48e-19;19!CL:0000333;3.10e-09;5 | |ontology_enrichment_celltype_v019=CL:0002577;5.20e-118;3!CL:0000349;1.48e-19;19!CL:0000333;3.10e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.20e-118,3;CL:0000349,1.48e-19,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:178!1.65e-16!1;DOID:326!1.65e-16!1;DOID:3978!1.65e-16!1;DOID:3394!1.65e-16!1;DOID:5844!1.65e-16!1;DOID:3095!1.73e-11!22;DOID:2994!1.73e-11!22;DOID:169!2.76e-11!6;DOID:114!6.42e-09!2;DOID:171!4.01e-07!10 | |ontology_enrichment_disease=DOID:178!1.65e-16!1;DOID:326!1.65e-16!1;DOID:3978!1.65e-16!1;DOID:3394!1.65e-16!1;DOID:5844!1.65e-16!1;DOID:3095!1.73e-11!22;DOID:2994!1.73e-11!22;DOID:169!2.76e-11!6;DOID:114!6.42e-09!2;DOID:171!4.01e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.26e-08;22!DOID:2994;3.26e-08;22!DOID:169;6.55e-08;6 | |ontology_enrichment_disease_v019=DOID:3095;3.26e-08;22!DOID:2994;3.26e-08;22!DOID:169;6.55e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22;DOID:169,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001987!1.48e-35!4;UBERON:0004340!1.48e-35!4;UBERON:0005631!1.41e-27!14;UBERON:0000158!1.41e-27!14;UBERON:0003124!1.20e-20!7;UBERON:0000478!3.87e-16!24;UBERON:0000013!2.37e-13!5;UBERON:0002410!2.37e-13!5;UBERON:0000305!1.04e-09!7;UBERON:0004871!1.31e-08!8;UBERON:0000010!8.03e-08!8;UBERON:0000995!2.82e-07!21;UBERON:0005795!5.74e-07!22;UBERON:0003975!5.74e-07!22;UBERON:0004923!8.70e-07!57 | |ontology_enrichment_uberon=UBERON:0001987!1.48e-35!4;UBERON:0004340!1.48e-35!4;UBERON:0005631!1.41e-27!14;UBERON:0000158!1.41e-27!14;UBERON:0003124!1.20e-20!7;UBERON:0000478!3.87e-16!24;UBERON:0000013!2.37e-13!5;UBERON:0002410!2.37e-13!5;UBERON:0000305!1.04e-09!7;UBERON:0004871!1.31e-08!8;UBERON:0000010!8.03e-08!8;UBERON:0000995!2.82e-07!21;UBERON:0005795!5.74e-07!22;UBERON:0003975!5.74e-07!22;UBERON:0004923!8.70e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.72e-89;4!UBERON:0000478;1.13e-15;24!UBERON:0000077;4.96e-14;27!UBERON:0000013;3.10e-09;5!UBERON:0002410;3.10e-09;5!UBERON:0000474;1.78e-08;37!UBERON:0003100;2.72e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001987;7.72e-89;4!UBERON:0000478;1.13e-15;24!UBERON:0000077;4.96e-14;27!UBERON:0000013;3.10e-09;5!UBERON:0002410;3.10e-09;5!UBERON:0000474;1.78e-08;37!UBERON:0003100;2.72e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.73e-89,4;UBERON:0004340,7.73e-89,4;UBERON:0003124,2.73e-51,7;UBERON:0005631,3.45e-26,14;UBERON:0000158,3.45e-26,14;UBERON:0000995,8.78e-18,21;UBERON:0005795,5.13e-17,22;UBERON:0003975,5.13e-17,22;UBERON:0000478,1.13e-15,24;UBERON:0004175,4.40e-15,25;UBERON:0000077,4.01e-13,29;UBERON:0003134,1.83e-10,37;UBERON:0000474,1.83e-10,37;UBERON:0003100,1.60e-09,41;UBERON:0000013,2.74e-09,5;UBERON:0002410,2.74e-09,5;UBERON:0006554,2.10e-08,47;UBERON:0003133,3.04e-08,48;UBERON:0001008,3.04e-08,48;UBERON:0005156,7.68e-07,59;UBERON:0000990,7.68e-07,59 | |||
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|short_description=p@chr5:153858046..153858049,+ | |short_description=p@chr5:153858046..153858049,+ | ||
}} | }} |
Latest revision as of 12:09, 30 July 2015
Short description: | p@chr5:153858046..153858049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:153858046..153858049, + |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.20e-118 | 3 |
extraembryonic cell | 1.48e-19 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 7.73e-89 | 4 |
allantois | 7.73e-89 | 4 |
chorion | 2.73e-51 | 7 |
extraembryonic membrane | 3.45e-26 | 14 |
membranous layer | 3.45e-26 | 14 |
uterus | 8.78e-18 | 21 |
embryonic uterus | 5.13e-17 | 22 |
internal female genitalia | 5.13e-17 | 22 |
extraembryonic structure | 1.13e-15 | 24 |
internal genitalia | 4.40e-15 | 25 |
mixed endoderm/mesoderm-derived structure | 4.01e-13 | 29 |
female reproductive organ | 1.83e-10 | 37 |
female reproductive system | 1.83e-10 | 37 |
female organism | 1.60e-09 | 41 |
sympathetic nervous system | 2.74e-09 | 5 |
autonomic nervous system | 2.74e-09 | 5 |
urinary system structure | 2.10e-08 | 47 |
reproductive organ | 3.04e-08 | 48 |
renal system | 3.04e-08 | 48 |
reproductive structure | 7.68e-07 | 59 |
reproductive system | 7.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.27e-08 | 22 |
germ cell cancer | 3.27e-08 | 22 |
neuroendocrine tumor | 5.92e-08 | 6 |