FFCP PHASE1:Hg19::chr5:179233884..179233887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=11282 | |EntrezGene=entrezgene:11282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7048 | |HGNC=HGNC:7048 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9UQ53 | |UniProt=uniprot:Q9UQ53 | ||
|association_with_transcript=46bp_to_ENST00000292591_5end | |association_with_transcript=46bp_to_ENST00000292591_5end | ||
|cluster_id=chr5:179233884..179233887,- | |||
|description=CAGE_peak_9_at_MGAT4B_5end | |description=CAGE_peak_9_at_MGAT4B_5end | ||
|id=chr5:179233884..179233887,- | |id=chr5:179233884..179233887,- | ||
Revision as of 13:51, 30 July 2015
| Short description: | p9@MGAT4B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_MGAT4B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 46bp_to_ENST00000292591_5end |
| EntrezGene: | 11282 |
| HGNC: | 7048 |
| UniProt: | Q9UQ53 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@MGAT4B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 2.11e-19 | 121 |
| embryonic cell | 4.78e-18 | 250 |
| lining cell | 3.25e-12 | 58 |
| barrier cell | 3.25e-12 | 58 |
| kidney cell | 5.55e-11 | 17 |
| kidney epithelial cell | 5.55e-11 | 17 |
| epithelial cell | 5.97e-11 | 253 |
| epithelial cell of nephron | 3.44e-10 | 15 |
| meso-epithelial cell | 1.48e-09 | 45 |
| kidney tubule cell | 2.71e-08 | 10 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 1.83e-13 | 117 |
| vessel | 7.25e-12 | 68 |
| vasculature | 3.88e-11 | 78 |
| vascular system | 3.88e-11 | 78 |
| nephron epithelium | 3.44e-10 | 15 |
| renal tubule | 3.44e-10 | 15 |
| nephron tubule | 3.44e-10 | 15 |
| nephron | 3.44e-10 | 15 |
| uriniferous tubule | 3.44e-10 | 15 |
| nephrogenic mesenchyme | 3.44e-10 | 15 |
Showing 1 to 10 of 39 entries
