FFCP PHASE1:Hg19::chr5:179511281..179511283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:179511281..179511283,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_at_chr5:179511281..179511283,+ | |||
|id=chr5:179511281..179511283,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.53e-52!5;CL:0002274!8.97e-20!5;CL:0000457!8.97e-20!5;CL:0002191!8.97e-20!5;CL:0000097!8.97e-20!5;CL:0000831!8.97e-20!5;CL:0002028!8.97e-20!5;CL:0000163!2.99e-11!9;CL:0000148!4.81e-10!10;CL:0000541!4.81e-10!10;CL:0000147!2.57e-07!14;CL:0000039!6.02e-07!7;CL:0000586!6.02e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.55e-98;1!UBERON:0007297;4.52e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!7.58e-16!11;UBERON:0006947!1.58e-15!3;UBERON:0004054!1.58e-15!3;UBERON:0000473!1.38e-12!8;UBERON:0001000!2.63e-12!1;UBERON:0005352!2.63e-12!1;UBERON:0000998!2.93e-12!1;UBERON:0006868!2.93e-12!1;UBERON:0001154!4.06e-12!1;UBERON:0001153!4.06e-12!1;UBERON:0003101!5.62e-12!22;UBERON:0000079!5.62e-12!22;UBERON:0005904!6.98e-12!4;UBERON:0000991!3.02e-08!21;UBERON:0009196!3.02e-08!21;UBERON:0009117!3.02e-08!21;UBERON:0005564!3.02e-08!21;UBERON:0004176!7.04e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.98e-131;3!UBERON:0004054;8.98e-131;3!UBERON:0001000;9.37e-99;1!UBERON:0005352;9.37e-99;1!UBERON:0005904;1.55e-98;4!UBERON:0000998;2.55e-98;1!UBERON:0006868;2.55e-98;1!UBERON:0000058;2.00e-40;10!UBERON:0003135;6.80e-37;11!UBERON:0004175;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0000473;1.07e-13;8!UBERON:0003937;1.33e-09;12!UBERON:0005399;1.33e-09;12!UBERON:0005156;3.42e-07;59!UBERON:0000990;3.42e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.98e-131,3;UBERON:0004054,8.98e-131,3;UBERON:0001000,9.37e-99,1;UBERON:0005352,9.37e-99,1;UBERON:0005904,1.55e-98,4;UBERON:0000998,2.55e-98,1;UBERON:0006868,2.55e-98,1;UBERON:0003135,6.80e-37,11;UBERON:0000058,5.37e-22,19;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0004175,4.64e-17,25;UBERON:0000473,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0004876,2.37e-10,11;UBERON:0003937,1.33e-09,12;UBERON:0005399,1.33e-09,12;UBERON:0003887,1.33e-09,12;UBERON:0003133,1.62e-09,48;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p@chr5:179511281..179511283,+ | |||
}} | }} |
Latest revision as of 13:56, 30 July 2015
Short description: | p@chr5:179511281..179511283, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:179511281..179511283, + |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.98e-131 | 3 |
internal male genitalia | 8.98e-131 | 3 |
vas deferens | 9.37e-99 | 1 |
spermatic cord | 9.37e-99 | 1 |
duct of male reproductive system | 1.55e-98 | 4 |
seminal vesicle | 2.55e-98 | 1 |
seminal fluid secreting gland | 2.55e-98 | 1 |
male reproductive organ | 6.80e-37 | 11 |
duct | 5.37e-22 | 19 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
internal genitalia | 4.64e-17 | 25 |
testis | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
urogenital ridge | 2.37e-10 | 11 |
sex gland | 1.33e-09 | 12 |
male reproductive gland | 1.33e-09 | 12 |
intraembryonic coelom | 1.33e-09 | 12 |
reproductive organ | 1.62e-09 | 48 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |