FFCP PHASE1:Hg19::chr5:32586539..32586555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10923 | |EntrezGene=entrezgene:10923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=19985 | |HGNC=HGNC:19985 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=319bp_to_ENST00000511988_5end | |association_with_transcript=319bp_to_ENST00000511988_5end | ||
|cluster_id=chr5:32586539..32586555,+ | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_8_at_SUB1_5end | |description=CAGE_peak_8_at_SUB1_5end | ||
Revision as of 14:22, 30 July 2015
| Short description: | p8@SUB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_SUB1_5end |
| Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
| Association with transcript: | 319bp_to_ENST00000511988_5end |
| EntrezGene: | 10923 |
| HGNC: | 19985 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@SUB1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 2.45e-88 | 24 |
| pro-B cell | 2.45e-88 | 24 |
| B cell | 1.45e-62 | 14 |
| lymphocyte | 3.36e-51 | 53 |
| common lymphoid progenitor | 3.36e-51 | 53 |
| lymphoid lineage restricted progenitor cell | 8.17e-46 | 52 |
| nongranular leukocyte | 2.53e-22 | 115 |
| leukocyte | 3.65e-21 | 136 |
| hematopoietic lineage restricted progenitor cell | 1.38e-18 | 120 |
| hematopoietic stem cell | 9.50e-17 | 168 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow cancer | 7.03e-13 | 1 |
| myeloma | 7.03e-13 | 1 |
| acute leukemia | 3.45e-12 | 1 |
Showing 1 to 3 of 3 entries
