FFCP PHASE1:Hg19::chr5:33794904..33794916,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:33794904..33794916,- to FFCP PHASE1:Hg19::chr5:33794904..33794916,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:33794904..33794916,- | |||
|coexpression_cluster_id=C4494 | |||
|description=CAGE_peak_at_chr5:33794904..33794916,- | |||
|id=chr5:33794904..33794916,- | |||
|ontology_enrichment_celltype=CL:0002620!1.75e-32!23;CL:0000057!2.05e-26!75;CL:0000055!3.71e-21!180;CL:0002551!2.12e-15!6;CL:0002570!5.56e-14!8;CL:0000048!6.51e-09!430;CL:0000723!1.45e-08!436;CL:0000034!4.05e-08!444;CL:0000219!5.41e-08!390;CL:0002320!1.72e-07!365;CL:0000134!2.12e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002551;3.93e-33;6!CL:0002620;4.73e-16;23!CL:0002573;7.90e-12;2!CL:0000057;1.75e-10;73!CL:0002570;3.50e-09;8!CL:0002574;6.72e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,3.46e-33,6;CL:0002620,5.38e-16,23;CL:0000057,1.46e-12,76;CL:0002573,7.91e-12,2;CL:0002570,4.71e-09,8;CL:0002574,5.75e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.17e-08!5;DOID:450!9.17e-08!5;DOID:66!9.17e-08!5;DOID:423!9.17e-08!5;DOID:0080000!9.17e-08!5;DOID:11722!9.17e-08!5;DOID:2394!7.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;6.72e-09;1!DOID:3165;6.72e-09;1!DOID:0060121;6.72e-09;1!DOID:2438;6.72e-09;1!DOID:4418;6.72e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.54e-09,1;DOID:3165,4.54e-09,1;DOID:0060121,4.54e-09,1;DOID:2438,4.54e-09,1;DOID:4418,4.54e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.81e-26!45;UBERON:0002416!1.81e-26!45;UBERON:0002097!6.20e-23!40;UBERON:0003102!1.41e-16!95;UBERON:0001013!4.01e-12!14;UBERON:0002067!6.08e-10!9;UBERON:0004016!6.08e-10!9;UBERON:0010083!6.08e-10!9;UBERON:0002384!6.17e-08!375;UBERON:0002118!2.10e-07!5;UBERON:0004532!2.10e-07!5;UBERON:0000475!4.31e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;4.56e-22;9!UBERON:0003102;1.80e-13;50!UBERON:0002199;1.48e-11;46!UBERON:0002416;1.48e-11;46!UBERON:0001280;4.89e-11;3!UBERON:0004647;4.89e-11;3!UBERON:0002097;1.48e-10;41!UBERON:0001013;6.36e-09;14!UBERON:0001282;6.72e-09;1!UBERON:0009842;6.72e-09;1!UBERON:0003704;6.72e-09;1!UBERON:0001171;6.72e-09;1!UBERON:0001172;6.72e-09;1!UBERON:0002072;5.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,4.19e-22,9;UBERON:0004016,4.19e-22,9;UBERON:0010083,4.19e-22,9;UBERON:0002199,1.29e-18,46;UBERON:0002416,1.29e-18,46;UBERON:0002097,3.93e-14,41;UBERON:0003102,9.19e-13,99;UBERON:0001280,2.51e-11,3;UBERON:0004647,2.51e-11,3;UBERON:0005171,2.51e-11,3;UBERON:0001282,3.88e-09,1;UBERON:0009842,3.88e-09,1;UBERON:0003704,3.88e-09,1;UBERON:0001171,3.88e-09,1;UBERON:0001172,3.88e-09,1;UBERON:0001013,7.76e-09,14;UBERON:0002072,5.00e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0.624320153660641,3.4228309292667,2.69007624993242,4.81481444439436,5.01806127541208,6.17983549489893,0.408308342509787,0.122834317311768,0.413303124703062,0,0,0,0,1.17835279767846,0.375355559615893,1.10825646193673,0,0,0,0,0.89694817844431,0,0.423863802319124,0.600182192168805,0.824420233907511,0,0.18611685633159,0.675105328965065,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,2.13005755509969,0.906768884048762,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,1.30325421702124,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,1.3878872442239,0.710246901252508,1.31403449622095,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0.580024309752732,0,0,0.689182862422653,0.107420244868274,0,0.426133137080504,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0,0,0,1.24252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.467426619694449,1.10961172300523,0,0,0,0,0,0.15543720058278,0,0.63718706865481,0,0,0,0.53168342911599,0,0.150257608997218,0,0.813741466409323,0.545545977607678,0.214821114084977,0,0.398095888698616,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0,1.21023041222112,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57324804675618,8.01006004736082,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0.624320153660641,3.4228309292667,2.69007624993242,4.81481444439436,5.01806127541208,6.17983549489893,0.408308342509787,0.122834317311768,0.413303124703062,0,0,0,0,1.17835279767846,0.375355559615893,1.10825646193673,0,0,0,0,0.89694817844431,0,0.423863802319124,0.600182192168805,0.824420233907511,0,0.18611685633159,0.675105328965065,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,2.13005755509969,0.906768884048762,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,1.30325421702124,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,1.3878872442239,0.710246901252508,1.31403449622095,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0.580024309752732,0,0,0.689182862422653,0.107420244868274,0,0.426133137080504,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0,0,0,1.24252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74627401443437,0.467426619694449,1.10961172300523,0,0,0,0,0,0.15543720058278,0,0.63718706865481,0,0,0,0.53168342911599,0,0.150257608997218,0,0.813741466409323,0.545545977607678,0.214821114084977,0,0.398095888698616,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0,1.21023041222112,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57324804675618,8.01006004736082,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:33794904..33794916,- | |||
}} | }} |
Latest revision as of 14:25, 30 July 2015
Short description: | p@chr5:33794904..33794916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:33794904..33794916, - |
Coexpression cluster: | C4494_schwannoma_Fibroblast_Mesenchymal_giant_Keratocytes_Sebocyte_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 3.46e-33 | 6 |
skin fibroblast | 5.38e-16 | 23 |
fibroblast | 1.46e-12 | 76 |
Schwann cell | 7.91e-12 | 2 |
mesenchymal stem cell of adipose | 4.71e-09 | 8 |
stromal cell of pancreas | 5.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
dermis | 4.19e-22 | 9 |
dermatome | 4.19e-22 | 9 |
future dermis | 4.19e-22 | 9 |
integument | 1.29e-18 | 46 |
integumental system | 1.29e-18 | 46 |
skin of body | 3.93e-14 | 41 |
surface structure | 9.19e-13 | 99 |
liver parenchyma | 2.51e-11 | 3 |
liver lobule | 2.51e-11 | 3 |
hepatic duct | 2.51e-11 | 3 |
intralobular bile duct | 3.88e-09 | 1 |
acinus | 3.88e-09 | 1 |
intrahepatic bile duct | 3.88e-09 | 1 |
portal lobule | 3.88e-09 | 1 |
hepatic acinus | 3.88e-09 | 1 |
adipose tissue | 7.76e-09 | 14 |
hypodermis | 5.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.54e-09 | 1 |
skin benign neoplasm | 4.54e-09 | 1 |
integumentary system benign neoplasm | 4.54e-09 | 1 |
dermis tumor | 4.54e-09 | 1 |
cutaneous fibrous histiocytoma | 4.54e-09 | 1 |