FFCP PHASE1:Hg19::chr6:128969727..128969733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:128969727..128969733,+ | |||
|coexpression_cluster_id=C380 | |coexpression_cluster_id=C380 | ||
|description=CAGE_peak_at_chr6:128969727..128969733,+ | |description=CAGE_peak_at_chr6:128969727..128969733,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.81e-40;1!UBERON:0004140;1.81e-40;1!UBERON:0005062;2.01e-40;4!UBERON:0007284;2.01e-40;4!UBERON:0004872;5.86e-07;7 | |ontology_enrichment_development_v019=UBERON:0010227;1.81e-40;1!UBERON:0004140;1.81e-40;1!UBERON:0005062;2.01e-40;4!UBERON:0007284;2.01e-40;4!UBERON:0004872;5.86e-07;7 | ||
|ontology_enrichment_disease=DOID:114!1.91e-44!2;DOID:178!5.13e-23!1;DOID:326!5.13e-23!1;DOID:3978!5.13e-23!1;DOID:3394!5.13e-23!1;DOID:5844!5.13e-23!1;DOID:1287!8.02e-23!4 | |ontology_enrichment_disease=DOID:114!1.91e-44!2;DOID:178!5.13e-23!1;DOID:326!5.13e-23!1;DOID:3978!5.13e-23!1;DOID:3394!5.13e-23!1;DOID:5844!5.13e-23!1;DOID:1287!8.02e-23!4 | ||
|ontology_enrichment_disease_v019=DOID:114;5.15e-21;2!DOID:1287;3.26e-11;4 | |ontology_enrichment_disease_v019=DOID:114;5.15e-21;2!DOID:1287;3.26e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,6.96e-21,2;DOID:1287,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!9.19e-52!27;UBERON:0003978!1.09e-30!3;UBERON:0009751!1.09e-30!3;UBERON:0000946!1.09e-30!3;UBERON:0002523!1.09e-30!3;UBERON:0005983!1.09e-30!3;UBERON:0002165!1.09e-30!3;UBERON:0002062!1.09e-30!3;UBERON:0007280!1.09e-30!3;UBERON:0004151!3.10e-30!3;UBERON:0002146!1.07e-23!1;UBERON:0005623!1.07e-23!1;UBERON:0002135!1.34e-23!1;UBERON:0002079!2.10e-23!1;UBERON:0000948!2.88e-23!24;UBERON:0005498!2.88e-23!24;UBERON:0004140!2.88e-23!24;UBERON:0009881!2.88e-23!24;UBERON:0004141!2.88e-23!24;UBERON:0003084!2.88e-23!24;UBERON:0007005!2.88e-23!24;UBERON:0004139!2.88e-23!24;UBERON:0004291!2.88e-23!24;UBERON:0002084!3.28e-23!1;UBERON:0002082!3.28e-23!1;UBERON:0004706!3.28e-23!1;UBERON:0003103!2.92e-20!69;UBERON:0002133!1.65e-12!2;UBERON:0002081!2.07e-12!2;UBERON:0001009!2.60e-12!113;UBERON:0007023!2.84e-09!115;UBERON:0002300!1.21e-08!3;UBERON:0002342!2.36e-07!14;UBERON:0005062!2.36e-07!14;UBERON:0004872!9.12e-07!84 | |ontology_enrichment_uberon=UBERON:0007100!9.19e-52!27;UBERON:0003978!1.09e-30!3;UBERON:0009751!1.09e-30!3;UBERON:0000946!1.09e-30!3;UBERON:0002523!1.09e-30!3;UBERON:0005983!1.09e-30!3;UBERON:0002165!1.09e-30!3;UBERON:0002062!1.09e-30!3;UBERON:0007280!1.09e-30!3;UBERON:0004151!3.10e-30!3;UBERON:0002146!1.07e-23!1;UBERON:0005623!1.07e-23!1;UBERON:0002135!1.34e-23!1;UBERON:0002079!2.10e-23!1;UBERON:0000948!2.88e-23!24;UBERON:0005498!2.88e-23!24;UBERON:0004140!2.88e-23!24;UBERON:0009881!2.88e-23!24;UBERON:0004141!2.88e-23!24;UBERON:0003084!2.88e-23!24;UBERON:0007005!2.88e-23!24;UBERON:0004139!2.88e-23!24;UBERON:0004291!2.88e-23!24;UBERON:0002084!3.28e-23!1;UBERON:0002082!3.28e-23!1;UBERON:0004706!3.28e-23!1;UBERON:0003103!2.92e-20!69;UBERON:0002133!1.65e-12!2;UBERON:0002081!2.07e-12!2;UBERON:0001009!2.60e-12!113;UBERON:0007023!2.84e-09!115;UBERON:0002300!1.21e-08!3;UBERON:0002342!2.36e-07!14;UBERON:0005062!2.36e-07!14;UBERON:0004872!9.12e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.92e-53;3!UBERON:0000946;1.92e-53;3!UBERON:0002146;6.62e-41;1!UBERON:0005623;6.62e-41;1!UBERON:0002079;1.81e-40;1!UBERON:0002135;1.81e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0000948;2.45e-29;22!UBERON:0002081;5.15e-21;2!UBERON:0002133;5.15e-21;2!UBERON:0010313;6.65e-17;10!UBERON:0004151;1.71e-14;3!UBERON:0003103;6.12e-12;61!UBERON:0001009;2.93e-07;112 | |ontology_enrichment_uberon_v019=UBERON:0003978;1.92e-53;3!UBERON:0000946;1.92e-53;3!UBERON:0002146;6.62e-41;1!UBERON:0005623;6.62e-41;1!UBERON:0002079;1.81e-40;1!UBERON:0002135;1.81e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0000948;2.45e-29;22!UBERON:0002081;5.15e-21;2!UBERON:0002133;5.15e-21;2!UBERON:0010313;6.65e-17;10!UBERON:0004151;1.71e-14;3!UBERON:0003103;6.12e-12;61!UBERON:0001009;2.93e-07;112 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.28e-53,3;UBERON:0009751,1.28e-53,3;UBERON:0000946,1.28e-53,3;UBERON:0002523,1.28e-53,3;UBERON:0005983,1.28e-53,3;UBERON:0002165,1.28e-53,3;UBERON:0002062,1.28e-53,3;UBERON:0007280,1.28e-53,3;UBERON:0002146,6.62e-41,1;UBERON:0005623,6.62e-41,1;UBERON:0002135,9.91e-41,1;UBERON:0002079,2.21e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0000948,5.19e-27,24;UBERON:0005498,5.19e-27,24;UBERON:0004140,5.19e-27,24;UBERON:0009881,5.19e-27,24;UBERON:0004141,5.19e-27,24;UBERON:0003084,5.19e-27,24;UBERON:0007005,5.19e-27,24;UBERON:0004139,5.19e-27,24;UBERON:0004291,5.19e-27,24;UBERON:0004797,1.02e-23,7;UBERON:0002133,3.81e-21,2;UBERON:0002081,5.70e-21,2;UBERON:0010227,5.70e-21,2;UBERON:0010313,5.90e-17,10;UBERON:0002342,5.90e-17,10;UBERON:0005062,5.90e-17,10;UBERON:0003103,3.48e-15,68;UBERON:0004151,1.83e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0004872,2.54e-08,83 | |||
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|short_description=p@chr6:128969727..128969733,+ | |short_description=p@chr6:128969727..128969733,+ | ||
}} | }} |
Latest revision as of 19:17, 30 July 2015
Short description: | p@chr6:128969727..128969733, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:128969727..128969733, + |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.28e-53 | 3 |
cardiac mesenchyme | 1.28e-53 | 3 |
cardial valve | 1.28e-53 | 3 |
tunica intima | 1.28e-53 | 3 |
heart layer | 1.28e-53 | 3 |
endocardium | 1.28e-53 | 3 |
endocardial cushion | 1.28e-53 | 3 |
presumptive endocardium | 1.28e-53 | 3 |
pulmonary valve | 6.62e-41 | 1 |
semi-lunar valve | 6.62e-41 | 1 |
mitral valve | 9.91e-41 | 1 |
left cardiac atrium | 2.21e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
heart | 5.19e-27 | 24 |
primitive heart tube | 5.19e-27 | 24 |
primary heart field | 5.19e-27 | 24 |
anterior lateral plate mesoderm | 5.19e-27 | 24 |
heart tube | 5.19e-27 | 24 |
heart primordium | 5.19e-27 | 24 |
cardiac mesoderm | 5.19e-27 | 24 |
cardiogenic plate | 5.19e-27 | 24 |
heart rudiment | 5.19e-27 | 24 |
blood vessel layer | 1.02e-23 | 7 |
atrioventricular valve | 3.81e-21 | 2 |
cardiac atrium | 5.70e-21 | 2 |
future cardiac atrium | 5.70e-21 | 2 |
neural crest-derived structure | 5.90e-17 | 10 |
neural crest | 5.90e-17 | 10 |
neural fold | 5.90e-17 | 10 |
compound organ | 3.48e-15 | 68 |
cardiac chamber | 1.83e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 2.54e-08 | 83 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |