FFCP PHASE1:Hg19::chr6:132271128..132271174,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:132271128..132271174,+ to FFCP PHASE1:Hg19::chr6:132271128..132271174,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:132271128..132271174,+ | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_at_chr6:132271128..132271174,+ | |||
|id=chr6:132271128..132271174,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.30e-21!119;CL:0000055!2.04e-20!180;CL:0000220!2.74e-12!246;CL:0002321!4.08e-12!248;CL:0000057!5.27e-12!75;CL:0000213!7.22e-12!57;CL:0000215!7.22e-12!57;CL:0002078!2.99e-11!44;CL:0002139!4.14e-11!24;CL:0000192!1.39e-10!42;CL:0000514!1.39e-10!42;CL:0000115!3.07e-10!35;CL:0000393!3.73e-10!60;CL:0000211!3.73e-10!60;CL:0000183!7.49e-10!59;CL:0000680!7.87e-10!57;CL:0000056!7.87e-10!57;CL:0000355!7.87e-10!57;CL:0000187!2.48e-09!54;CL:0000359!5.48e-09!32;CL:0000071!1.10e-08!18;CL:0002546!1.10e-08!18;CL:0002334!1.13e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.67e-11;24!CL:0000115;2.45e-11;36!CL:0002334;2.66e-11;12!CL:0000071;2.47e-09;18!CL:0002078;1.99e-08;45!CL:0000359;4.06e-07;32!CL:1000413;7.74e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.34e-13,76;CL:0000115,8.15e-13,36;CL:0002078,4.05e-12,45;CL:0002139,1.13e-11,24;CL:0002334,2.69e-11,12;CL:0000222,9.91e-11,121;CL:0000071,1.69e-09,18;CL:0002546,1.69e-09,18;CL:0000213,8.32e-09,58;CL:0000215,8.32e-09,58;CL:0000359,1.51e-07,32;CL:1000413,4.96e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.47e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.14e-24!79;UBERON:0007798!1.14e-24!79;UBERON:0004872!8.12e-22!84;UBERON:0001009!4.93e-20!113;UBERON:0000055!5.01e-20!69;UBERON:0003914!1.54e-19!118;UBERON:0004535!1.66e-19!110;UBERON:0001981!1.28e-18!60;UBERON:0007500!1.28e-18!60;UBERON:0004537!1.28e-18!60;UBERON:0006965!1.28e-18!60;UBERON:0000490!1.37e-14!138;UBERON:0001637!5.05e-14!42;UBERON:0003509!5.05e-14!42;UBERON:0004572!5.05e-14!42;UBERON:0004573!2.49e-11!33;UBERON:0004571!2.49e-11!33;UBERON:0006914!3.37e-10!25;UBERON:0000487!7.05e-10!22;UBERON:0000477!1.09e-09!286;UBERON:0002385!1.48e-09!63;UBERON:0001015!1.48e-09!63;UBERON:0000383!1.48e-09!63;UBERON:0000119!2.77e-09!312;UBERON:0001134!3.29e-09!61;UBERON:0002036!3.29e-09!61;UBERON:0003082!3.29e-09!61;UBERON:0005256!6.04e-09!143;UBERON:0000483!7.02e-09!309;UBERON:0001986!1.10e-08!18;UBERON:0004638!1.10e-08!18;UBERON:0004852!1.10e-08!18;UBERON:0002100!1.35e-08!216;UBERON:0000468!1.80e-08!659;UBERON:0000914!4.69e-08!83;UBERON:0002329!4.69e-08!83;UBERON:0003077!4.69e-08!83;UBERON:0003059!4.69e-08!83;UBERON:0007282!4.69e-08!83;UBERON:0009618!4.69e-08!83;UBERON:0007285!4.69e-08!83;UBERON:0000947!4.90e-08!21;UBERON:0010191!4.90e-08!21;UBERON:0004290!9.36e-08!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.40e-14;42!UBERON:0003509;3.40e-14;42!UBERON:0004572;3.40e-14;42!UBERON:0004573;7.93e-13;33!UBERON:0004571;7.93e-13;33!UBERON:0000947;1.21e-10;21!UBERON:0010191;1.21e-10;21!UBERON:0006914;1.29e-09;25!UBERON:0004638;2.47e-09;18!UBERON:0001986;2.47e-09;18!UBERON:0004852;2.47e-09;18!UBERON:0007500;2.90e-09;56!UBERON:0001981;2.90e-09;56!UBERON:0004537;2.90e-09;56!UBERON:0002049;3.92e-09;75!UBERON:0007798;3.92e-09;75!UBERON:0004457;1.04e-08;9!UBERON:0000042;1.04e-08;9!UBERON:0000487;1.71e-08;22!UBERON:0003914;2.36e-08;74!UBERON:0000055;3.41e-08;65!UBERON:0003688;5.90e-08;6!UBERON:0002358;5.90e-08;6!UBERON:0003684;5.90e-08;6!UBERON:0001178;5.90e-08;6!UBERON:0003915;7.74e-07;9!UBERON:0004700;7.74e-07;9!UBERON:0001917;7.74e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.74e-21,78;UBERON:0007798,1.74e-21,78;UBERON:0004535,1.18e-18,109;UBERON:0000055,3.97e-18,68;UBERON:0004872,6.36e-18,83;UBERON:0001009,1.01e-17,112;UBERON:0007500,2.95e-17,59;UBERON:0001981,2.95e-17,59;UBERON:0004537,2.95e-17,59;UBERON:0006965,2.95e-17,59;UBERON:0001637,4.86e-16,42;UBERON:0003509,4.86e-16,42;UBERON:0004572,4.86e-16,42;UBERON:0003914,1.22e-15,117;UBERON:0004573,7.72e-14,33;UBERON:0004571,7.72e-14,33;UBERON:0000947,1.15e-10,21;UBERON:0010191,1.15e-10,21;UBERON:0006914,8.91e-10,25;UBERON:0004638,1.69e-09,18;UBERON:0001986,1.69e-09,18;UBERON:0004852,1.69e-09,18;UBERON:0000487,1.23e-08,22;UBERON:0003688,2.98e-08,6;UBERON:0002358,2.98e-08,6;UBERON:0003684,2.98e-08,6;UBERON:0001178,2.98e-08,6;UBERON:0003915,4.96e-07,9;UBERON:0004700,4.96e-07,9;UBERON:0001917,4.96e-07,9 | |||
|phase1_expression=3.63356758541113,5.35251309727458,1.83240725324762,15.0109947529696,4.91657203870017,13.9574163856059,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0.218441372130172,1.05506791291381,0.618831764800233,5.96515276310248,3.36162573225888,3.01347264011988,3.65155045193687,3.41552959153355,0,1.42800483870977,0,0,0.136874425072884,3.64073654824928,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19656404608826,2.89151321907653,2.00535164254356,2.17269778441236,0,4.86634870302636,0.472674085820339,1.55210578223795,2.0202000709419,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,4.16568601929113,1.69592382577203,4.61449379830897,5.22724279686128,1.67195973229448,0.516833518338658,0.35576626268671,1.00416183829401,2.81980521976403,0.760272105718513,3.66093086322254,3.67663080345869,15.3926970097534,0.714397826272638,1.34717623575702,1.0135033243499,1.53316637465883,0.949265659568129,2.19842092716489,0,0,0,6.95760732373446,1.51956613997496,0.926864265692532,3.44203944898576,1.06400514659507,2.24271040056923,2.1349799145941,6.166688710429,0.622422070799533,2.96363478553314,4.08654757783647,0.454072282934794,4.03323147135999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.61417158655884,0,1.18800285728205,1.48360157567134,0,0.718618141816238,0,0.250237039743928,0,0.877955241761676,6.74273150757843,2.25357088359895,4.76415169272088,1.4351170855109,1.06778694409284,0.423863802319124,3.60109315301283,0.309157587715317,1.8034837803194,1.48893485065272,1.35021065793013,0.779496041289589,0.757301322732344,0.276149695926898,0,2.13005755509969,0.403008392910561,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,5.57241513638375,1.44375896333917,0,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,1.20097467208968,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,5.77325368101093,0.231860809950154,3.28744343860301,1.87676382089396,7.87075371380238,6.84914948044554,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,0.4400297149257,2.19761916788222,0,0.845302752556,1.59562869950922,2.08014873822732,0,0,0,1.71573592389777,0,0,0.65147236858747,2.13235169245527,0,0.904318131178758,1.74306691720059,0.899756920638513,0,0,0,3.35474797688216,2.29723871668228,0,1.15825045334063,0.410952645100767,0.179060963239896,0,0,0,0,0,0,2.31986643833309,0,0.637938751653163,0,0,0,2.20844685094452,2.00068208423871,3.7977103317963,15.3898437532797,13.3821741597871,14.6663245981559,14.0569697991256,0,0,1.03473071292505,0,2.58116835958384,0,0.195801157462741,0,0,0,0,0.909382714338778,0,0.30239029332968,1.98486246255021,2.14846762603287,4.77122160536225,2.43464383585832,1.53512174720011,10.6163587954781,8.90508398669946,2.15893571323718,3.01854933032316,0.246381468041427,1.03850885836724,2.20799719073923,0,0.601519410909855,0,0.114814448164607,0.364182336013434,0.655622074797121,0,0.539107359730903,0,1.46139224653261,0.316654886678627,2.27466768141793,1.36074964221213,4.75015015424707,6.16909010761157,0.812839312631559,1.00337954770971,0,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.976135183992909,0.309123034943167,0,0,0.574265537996172,0,6.42735719376638,0,0.308097234229289,0.614014698904518,0.827019434907183,0.107420244868274,0.290033387828457,0,0.445160178233687,0,0.192190067365106,0,0,0.929691098594572,3.46293581513704,0,1.54016790088044,1.06461206063404,0,3.52116016297448,0.858749320451947,0.744316738719335,0.316379424718726,1.14378116354295,0.511795582622668,0,0,0,0.539617372749944,0.54907405947211,0.824686816419805,0.808729926293264,1.58510321173008,2.94880919367287,0.975267478179181,2.43713489631284,5.28250733783777,0.272999822815972,0.424216295861138,0,0.551365343546124,5.97095077717098,3.06915619677634,0.578775534266688,5.24715801637306,0.608731130888112,3.40805847909725,0.563391205064483,0.430234056612155,1.67023369722306,0.35667105148125,0,2.74439925886963,3.29294892959902,1.13841952129715,1.39973888097993,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.439524537815682,1.8204078262427,0,0.852408440419239,0.23874448473769,0,0,0,0.140669416410513,0.333926115068718,0,0,4.98119970627674,0,0,1.84083628503879,0,3.42143546427988,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0.15032341941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| ||
|short_description=p@chr6:132271128..132271174,+ | |||
}} | }} |
Latest revision as of 19:29, 30 July 2015
Short description: | p@chr6:132271128..132271174, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:132271128..132271174, + |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.34e-13 | 76 |
endothelial cell | 8.15e-13 | 36 |
meso-epithelial cell | 4.05e-12 | 45 |
endothelial cell of vascular tree | 1.13e-11 | 24 |
preadipocyte | 2.69e-11 | 12 |
mesodermal cell | 9.91e-11 | 121 |
blood vessel endothelial cell | 1.69e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.69e-09 | 18 |
lining cell | 8.32e-09 | 58 |
barrier cell | 8.32e-09 | 58 |
vascular associated smooth muscle cell | 1.51e-07 | 32 |
endothelial cell of artery | 4.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.74e-21 | 78 |
vascular system | 1.74e-21 | 78 |
cardiovascular system | 1.18e-18 | 109 |
vessel | 3.97e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 6.36e-18 | 83 |
circulatory system | 1.01e-17 | 112 |
epithelial tube open at both ends | 2.95e-17 | 59 |
blood vessel | 2.95e-17 | 59 |
blood vasculature | 2.95e-17 | 59 |
vascular cord | 2.95e-17 | 59 |
artery | 4.86e-16 | 42 |
arterial blood vessel | 4.86e-16 | 42 |
arterial system | 4.86e-16 | 42 |
epithelial tube | 1.22e-15 | 117 |
systemic artery | 7.72e-14 | 33 |
systemic arterial system | 7.72e-14 | 33 |
aorta | 1.15e-10 | 21 |
aortic system | 1.15e-10 | 21 |
squamous epithelium | 8.91e-10 | 25 |
blood vessel endothelium | 1.69e-09 | 18 |
endothelium | 1.69e-09 | 18 |
cardiovascular system endothelium | 1.69e-09 | 18 |
simple squamous epithelium | 1.23e-08 | 22 |
omentum | 2.98e-08 | 6 |
peritoneum | 2.98e-08 | 6 |
abdominal cavity | 2.98e-08 | 6 |
visceral peritoneum | 2.98e-08 | 6 |
endothelial tube | 4.96e-07 | 9 |
arterial system endothelium | 4.96e-07 | 9 |
endothelium of artery | 4.96e-07 | 9 |