FFCP PHASE1:Hg19::chr6:64043904..64043907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:64043904..64043907,- | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr6:64043904..64043907,- | |description=CAGE_peak_at_chr6:64043904..64043907,- | ||
|id=chr6:64043904..64043907,- | |id=chr6:64043904..64043907,- | ||
|ontology_enrichment_celltype=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2 | |ontology_enrichment_celltype=CL:0000159!8.04e-16!2;CL:0000242!9.32e-16!2;CL:0002231!1.16e-10!3;CL:0000313!5.59e-09!1;CL:0000319!1.48e-08!1;CL:0000312!8.17e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;1.23e-66;1!CL:0000159;3.61e-34;2 | ||
|ontology_enrichment_disease=DOID:2152;1.23e-66;1!DOID:4362;1.71e-14;5!DOID:120;6.40e-11;27!DOID:193;3.03e-10;29 | |ontology_enrichment_celltype_v019_2=CL:0000313,1.23e-66,1;CL:0000159,3.61e-34,2 | ||
|ontology_enrichment_uberon=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0000002;2.59e-12;6!UBERON:0001560;2.59e-12;6!UBERON:0005156;1.82e-09;59!UBERON:0000990;1.82e-09;59!UBERON:0000474;1.23e-08;37!UBERON:0003134;1.23e-08;33!UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0003100;7.79e-07;41!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |ontology_enrichment_development_v019=UBERON:0009847;3.66e-23;3!UBERON:0003353;3.66e-23;3!UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10!UBERON:0006603;1.08e-07;65 | ||
|ontology_enrichment_disease=DOID:0050687!8.65e-10!143;DOID:305!4.56e-09!106;DOID:2152!5.59e-09!1;DOID:3030!1.48e-08!1;DOID:162!2.11e-08!235;DOID:0050619!2.64e-08!1;DOID:1357!2.64e-08!1;DOID:14566!3.79e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.23e-66;1!DOID:4362;1.71e-14;5!DOID:120;6.40e-11;27!DOID:193;3.03e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.23e-66,1;DOID:4362,1.60e-14,5;DOID:120,6.25e-11,27;DOID:193,2.96e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0004911!5.59e-09!1;UBERON:0001764!2.64e-08!1;UBERON:0001825!2.64e-08!1;UBERON:0001282!3.06e-08!1;UBERON:0009842!3.06e-08!1;UBERON:0003704!3.06e-08!1;UBERON:0001171!3.06e-08!1;UBERON:0001172!3.06e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.23e-66;1!UBERON:0004909;3.61e-34;2!UBERON:0000002;2.59e-12;6!UBERON:0001560;2.59e-12;6!UBERON:0005156;1.82e-09;59!UBERON:0000990;1.82e-09;59!UBERON:0000474;1.23e-08;37!UBERON:0003134;1.23e-08;33!UBERON:0002367;2.55e-07;11!UBERON:0010147;2.55e-07;11!UBERON:0003100;7.79e-07;41!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.23e-66,1;UBERON:0004909,3.61e-34,2;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0003134,2.82e-08,37;UBERON:0000474,2.82e-08,37;UBERON:0003100,1.42e-07,41;UBERON:0002367,2.63e-07,11;UBERON:0010147,2.63e-07,11;UBERON:0009846,2.63e-07,11;UBERON:0003353,2.63e-07,11;UBERON:0004902,2.63e-07,11;UBERON:0003820,2.63e-07,11;UBERON:0009847,2.63e-07,11;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12 | |||
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|short_description=p@chr6:64043904..64043907,- | |short_description=p@chr6:64043904..64043907,- | ||
}} | }} |
Latest revision as of 02:40, 31 July 2015
Short description: | p@chr6:64043904..64043907, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64043904..64043907, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.23e-66 | 1 |
seromucus secreting cell | 3.61e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.23e-66 | 1 |
epithelium of gonad | 3.61e-34 | 2 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
female reproductive organ | 2.82e-08 | 37 |
female reproductive system | 2.82e-08 | 37 |
female organism | 1.42e-07 | 41 |
prostate gland | 2.63e-07 | 11 |
male accessory sex gland | 2.63e-07 | 11 |
embryonic cloacal epithelium | 2.63e-07 | 11 |
epithelium of hindgut | 2.63e-07 | 11 |
urogenital sinus epithelium | 2.63e-07 | 11 |
prostate bud | 2.63e-07 | 11 |
prostate field | 2.63e-07 | 11 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.23e-66 | 1 |
cervical cancer | 1.60e-14 | 5 |
female reproductive organ cancer | 6.25e-11 | 27 |
reproductive organ cancer | 2.96e-10 | 29 |