FFCP PHASE1:Hg19::chr6:66969192..66969207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:66969192..66969207,+ | |||
|coexpression_cluster_id=C4623 | |||
|description=CAGE_peak_at_chr6:66969192..66969207,+ | |description=CAGE_peak_at_chr6:66969192..66969207,+ | ||
|id=chr6:66969192..66969207,+ | |id=chr6:66969192..66969207,+ | ||
|ontology_enrichment_celltype=CL:0000062!5.11e-09!11;CL:0000375!5.11e-09!11;CL:0000335!5.11e-09!11;CL:0002379!3.41e-07!1 | |ontology_enrichment_celltype=CL:0000062!5.11e-09!11;CL:0000375!5.11e-09!11;CL:0000335!5.11e-09!11;CL:0002379!3.41e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.86e-09;2!CL:0000062;2.55e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.86e-09,2;CL:0000062,5.64e-07,11;CL:0000375,5.64e-07,11;CL:0000335,5.64e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.92e-07;10!CL:0000335;5.81e-07;11 | |||
|ontology_enrichment_disease=DOID:1749!1.86e-20!14;DOID:305!1.50e-12!106;DOID:0050687!2.14e-12!143;DOID:162!8.62e-12!235;DOID:14566!1.95e-11!239;DOID:7!7.76e-11!39;DOID:0060085!2.37e-07!1;DOID:3165!2.37e-07!1;DOID:0060121!2.37e-07!1;DOID:2438!2.37e-07!1;DOID:4418!2.37e-07!1;DOID:3620!3.41e-07!1;DOID:3565!3.41e-07!1 | |ontology_enrichment_disease=DOID:1749!1.86e-20!14;DOID:305!1.50e-12!106;DOID:0050687!2.14e-12!143;DOID:162!8.62e-12!235;DOID:14566!1.95e-11!239;DOID:7!7.76e-11!39;DOID:0060085!2.37e-07!1;DOID:3165!2.37e-07!1;DOID:0060121!2.37e-07!1;DOID:2438!2.37e-07!1;DOID:4418!2.37e-07!1;DOID:3620!3.41e-07!1;DOID:3565!3.41e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.96e-29;14!DOID:4231;1.51e-09;2!DOID:1907;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.84e-29,14;DOID:4231,1.57e-09,2;DOID:1907,1.57e-09,2;DOID:0050687,8.45e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.53e-13!4;UBERON:0003928!1.53e-13!4;UBERON:0002294!3.05e-13!7;UBERON:0001173!3.05e-13!7;UBERON:0004912!3.05e-13!7;UBERON:0001282!5.50e-07!1;UBERON:0009842!5.50e-07!1;UBERON:0003704!5.50e-07!1;UBERON:0001171!5.50e-07!1;UBERON:0001172!5.50e-07!1;UBERON:0003343!6.59e-07!4;UBERON:0004785!6.59e-07!4 | |ontology_enrichment_uberon=UBERON:0002394!1.53e-13!4;UBERON:0003928!1.53e-13!4;UBERON:0002294!3.05e-13!7;UBERON:0001173!3.05e-13!7;UBERON:0004912!3.05e-13!7;UBERON:0001282!5.50e-07!1;UBERON:0009842!5.50e-07!1;UBERON:0003704!5.50e-07!1;UBERON:0001171!5.50e-07!1;UBERON:0001172!5.50e-07!1;UBERON:0003343!6.59e-07!4;UBERON:0004785!6.59e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.86e-09;2!UBERON:0004801;1.86e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.86e-09,2;UBERON:0004801,1.86e-09,2 | |||
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|short_description=p@chr6:66969192..66969207,+ | |short_description=p@chr6:66969192..66969207,+ | ||
}} | }} |
Latest revision as of 02:45, 31 July 2015
Short description: | p@chr6:66969192..66969207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:66969192..66969207, + |
Coexpression cluster: | C4623_acantholytic_oral_bronchial_glioblastoma_renal_Saos2_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.86e-09 | 2 |
osteoblast | 5.64e-07 | 11 |
osteoprogenitor cell | 5.64e-07 | 11 |
mesenchyme condensation cell | 5.64e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.86e-09 | 2 |
cervix epithelium | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.84e-29 | 14 |
histiocytoma | 1.57e-09 | 2 |
malignant fibroxanthoma | 1.57e-09 | 2 |
cell type cancer | 8.45e-07 | 143 |