FFCP PHASE1:Hg19::chr6:75886286..75886300,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75886286..75886300,- | |||
|coexpression_cluster_id=C1747 | |||
|description=CAGE_peak_at_chr6:75886286..75886300,- | |description=CAGE_peak_at_chr6:75886286..75886300,- | ||
|id=chr6:75886286..75886300,- | |id=chr6:75886286..75886300,- | ||
|ontology_enrichment_celltype=CL:0002620!6.90e-12!23;CL:0000057!1.02e-10!75;CL:0002334!1.68e-07!12;CL:0000055!3.91e-07!180 | |ontology_enrichment_celltype=CL:0002620!6.90e-12!23;CL:0000057!1.02e-10!75;CL:0002334!1.68e-07!12;CL:0000055!3.91e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.56e-27;23!CL:0002334;8.99e-22;12!CL:0002580;1.47e-17;3!CL:0002579;6.17e-17;3!CL:0002617;3.35e-12;2!CL:0000057;1.57e-08;73!CL:0000135;2.59e-08;3!CL:0000388;2.59e-08;3!CL:0002581;6.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.34e-27,23;CL:0000057,8.40e-25,76;CL:0002334,9.03e-22,12;CL:0002580,1.43e-17,3;CL:0002579,7.50e-17,3;CL:0002617,3.75e-12,2;CL:0000135,1.97e-08,3;CL:0000388,1.97e-08,3;CL:0002581,5.26e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.23e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.43e-07!5;DOID:450!1.43e-07!5;DOID:66!1.43e-07!5;DOID:423!1.43e-07!5;DOID:0080000!1.43e-07!5;DOID:11722!1.43e-07!5 | |ontology_enrichment_disease=DOID:17!1.43e-07!5;DOID:450!1.43e-07!5;DOID:66!1.43e-07!5;DOID:423!1.43e-07!5;DOID:0080000!1.43e-07!5;DOID:11722!1.43e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;8.12e-18;5!DOID:450;8.12e-18;5!DOID:66;8.12e-18;5!DOID:423;8.12e-18;5!DOID:0080000;8.12e-18;5!DOID:11722;8.12e-18;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.78e-18,5;DOID:450,3.78e-18,5;DOID:66,3.78e-18,5;DOID:423,3.78e-18,5;DOID:0080000,3.78e-18,5;DOID:11722,3.78e-18,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.28e-08!6;UBERON:0002358!4.28e-08!6;UBERON:0003684!4.28e-08!6;UBERON:0001178!4.28e-08!6;UBERON:0002097!4.92e-08!40;UBERON:0003102!5.71e-08!95;UBERON:0002199!3.48e-07!45;UBERON:0002416!3.48e-07!45 | |ontology_enrichment_uberon=UBERON:0003688!4.28e-08!6;UBERON:0002358!4.28e-08!6;UBERON:0003684!4.28e-08!6;UBERON:0001178!4.28e-08!6;UBERON:0002097!4.92e-08!40;UBERON:0003102!5.71e-08!95;UBERON:0002199!3.48e-07!45;UBERON:0002416!3.48e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001443;7.20e-18;11!UBERON:0004457;6.04e-15;9!UBERON:0000042;6.04e-15;9!UBERON:0003688;7.89e-15;6!UBERON:0002358;7.89e-15;6!UBERON:0003684;7.89e-15;6!UBERON:0001178;7.89e-15;6!UBERON:0000310;6.79e-14;10!UBERON:0002097;4.84e-11;41!UBERON:0002199;8.95e-10;46!UBERON:0002416;8.95e-10;46!UBERON:0007846;2.59e-08;3!UBERON:0000043;2.59e-08;3!UBERON:0007845;2.59e-08;3!UBERON:0002426;6.23e-07;1!UBERON:0003831;6.23e-07;1!UBERON:0003898;6.23e-07;1!UBERON:0004830;6.23e-07;1!UBERON:0003830;6.23e-07;1!UBERON:0005175;6.23e-07;1!UBERON:0001774;6.23e-07;1!UBERON:0001103;6.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,7.12e-18,11;UBERON:0003688,1.04e-14,6;UBERON:0002358,1.04e-14,6;UBERON:0003684,1.04e-14,6;UBERON:0001178,1.04e-14,6;UBERON:0002097,2.56e-14,41;UBERON:0000310,7.09e-14,10;UBERON:0002199,1.57e-12,46;UBERON:0002416,1.57e-12,46;UBERON:0004457,4.39e-11,12;UBERON:0000042,4.39e-11,12;UBERON:0007846,1.97e-08,3;UBERON:0000043,1.97e-08,3;UBERON:0007845,1.97e-08,3;UBERON:0002426,5.57e-07,1;UBERON:0003831,5.57e-07,1;UBERON:0003898,5.57e-07,1;UBERON:0004830,5.57e-07,1;UBERON:0003830,5.57e-07,1;UBERON:0005175,5.57e-07,1;UBERON:0001774,5.57e-07,1;UBERON:0001103,5.57e-07,1;UBERON:0010084,5.57e-07,1 | |||
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| ||
|short_description=p@chr6:75886286..75886300,- | |short_description=p@chr6:75886286..75886300,- | ||
}} | }} |
Latest revision as of 03:14, 31 July 2015
Short description: | p@chr6:75886286..75886300, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75886286..75886300, - |
Coexpression cluster: | C1747_Preadipocyte_Fibroblast_Adipocyte_Chondrocyte_heart_Multipotent_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.34e-27 | 23 |
fibroblast | 8.40e-25 | 76 |
preadipocyte | 9.03e-22 | 12 |
preadipocyte of the breast | 1.43e-17 | 3 |
omentum preadipocyte | 7.50e-17 | 3 |
adipocyte of breast | 3.75e-12 | 2 |
fibrocyte | 1.97e-08 | 3 |
tendon cell | 1.97e-08 | 3 |
perirenal preadipocyte | 5.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chest | 7.12e-18 | 11 |
omentum | 1.04e-14 | 6 |
peritoneum | 1.04e-14 | 6 |
abdominal cavity | 1.04e-14 | 6 |
visceral peritoneum | 1.04e-14 | 6 |
skin of body | 2.56e-14 | 41 |
breast | 7.09e-14 | 10 |
integument | 1.57e-12 | 46 |
integumental system | 1.57e-12 | 46 |
cavity lining | 4.39e-11 | 12 |
serous membrane | 4.39e-11 | 12 |
dense regular connective tissue | 1.97e-08 | 3 |
tendon | 1.97e-08 | 3 |
regular connective tissue | 1.97e-08 | 3 |
chest muscle | 5.57e-07 | 1 |
respiratory system muscle | 5.57e-07 | 1 |
skeletal muscle of trunk | 5.57e-07 | 1 |
respiratory system skeletal muscle | 5.57e-07 | 1 |
thoracic segment muscle | 5.57e-07 | 1 |
chest organ | 5.57e-07 | 1 |
muscle of trunk | 5.57e-07 | 1 |
diaphragm | 5.57e-07 | 1 |
future diaphragm | 5.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.78e-18 | 5 |
myotonic disease | 3.78e-18 | 5 |
muscle tissue disease | 3.78e-18 | 5 |
myopathy | 3.78e-18 | 5 |
muscular disease | 3.78e-18 | 5 |
myotonic dystrophy | 3.78e-18 | 5 |