FFCP PHASE1:Hg19::chr7:154497207..154497243,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:154497207..154497243,- | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_at_chr7:154497207..154497243,- | |description=CAGE_peak_at_chr7:154497207..154497243,- | ||
|id=chr7:154497207..154497243,- | |id=chr7:154497207..154497243,- | ||
|ontology_enrichment_celltype=CL:0002541!3.10e-30!3;CL:0002149!6.71e-16!6;CL:0002255!6.71e-16!6;CL:0002178!1.12e-08!3 | |ontology_enrichment_celltype=CL:0002541!3.10e-30!3;CL:0002149!6.71e-16!6;CL:0002255!6.71e-16!6;CL:0002178!1.12e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002149;5.98e-34;6!CL:0002255;5.98e-34;6!CL:0002541;9.46e-18;3!CL:0000499;3.65e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.98e-34,6;CL:0002255,5.98e-34,6;CL:0002541,9.46e-18,3;CL:0000499,3.65e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.99e-21;10 | |||
|ontology_enrichment_disease=DOID:3001!6.71e-16!6;DOID:299!1.33e-14!25;DOID:4929!2.59e-12!2;DOID:3119!3.04e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3001;5.98e-34;6!DOID:299;5.06e-09;25!DOID:120;1.98e-08;27!DOID:193;6.44e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.98e-34,6;DOID:299,5.06e-09,25;DOID:120,1.98e-08,27;DOID:193,6.44e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.10e-30!3;UBERON:0000920!3.10e-30!3;UBERON:0000997!2.10e-23!1;UBERON:0005056!2.10e-23!1;UBERON:0004913!3.28e-23!1;UBERON:0003703!3.28e-23!1;UBERON:0001174!3.28e-23!1;UBERON:0004914!3.28e-23!1;UBERON:0003124!1.40e-13!7;UBERON:0005631!2.95e-07!14;UBERON:0000158!2.95e-07!14;UBERON:0002394!8.61e-07!4;UBERON:0003928!8.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;6.58e-50;1!UBERON:0005056;6.58e-50;1!UBERON:0004176;6.58e-50;1!UBERON:0003124;9.46e-18;3!UBERON:0000920;9.46e-18;3!UBERON:0003134;9.59e-16;33!UBERON:0000474;7.78e-13;37!UBERON:0000995;9.17e-13;17!UBERON:0003975;4.07e-12;18!UBERON:0004175;1.53e-10;21!UBERON:0003100;2.09e-10;41!UBERON:0003133;5.18e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.58e-50,1;UBERON:0005056,6.58e-50,1;UBERON:0000920,9.46e-18,3;UBERON:0003134,5.98e-13,37;UBERON:0000474,5.98e-13,37;UBERON:0003100,8.89e-12,41;UBERON:0000995,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0005795,4.14e-10,22;UBERON:0003975,4.14e-10,22;UBERON:0004175,5.06e-09,25;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0003124,2.18e-08,7 | |||
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|short_description=p@chr7:154497207..154497243,- | |short_description=p@chr7:154497207..154497243,- | ||
}} | }} |
Latest revision as of 07:51, 31 July 2015
Short description: | p@chr7:154497207..154497243, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:154497207..154497243, - |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.98e-34 | 6 |
stromal cell of endometrium | 5.98e-34 | 6 |
chorionic membrane mesenchymal stem cell | 9.46e-18 | 3 |
stromal cell | 3.65e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.58e-50 | 1 |
external female genitalia | 6.58e-50 | 1 |
egg chorion | 9.46e-18 | 3 |
female reproductive organ | 5.98e-13 | 37 |
female reproductive system | 5.98e-13 | 37 |
female organism | 8.89e-12 | 41 |
uterus | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
embryonic uterus | 4.14e-10 | 22 |
internal female genitalia | 4.14e-10 | 22 |
internal genitalia | 5.06e-09 | 25 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
chorion | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.98e-34 | 6 |
adenocarcinoma | 5.06e-09 | 25 |
female reproductive organ cancer | 1.98e-08 | 27 |
reproductive organ cancer | 6.44e-08 | 29 |