FFCP PHASE1:Hg19::chr7:15707836..15707857,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=264bp_to_ENST00000451240,uc003ste.2_5end | |association_with_transcript=264bp_to_ENST00000451240,uc003ste.2_5end | ||
|cluster_id=chr7:15707836..15707857,+ | |||
|coexpression_cluster_id=C794 | |coexpression_cluster_id=C794 | ||
|description=CAGE_peak_1_at_ENST00000451240_5end,CAGE_peak_1_at_uc003ste.2_5end | |description=CAGE_peak_1_at_ENST00000451240_5end,CAGE_peak_1_at_uc003ste.2_5end | ||
Latest revision as of 08:00, 31 July 2015
| Short description: | p1@ENST00000451240, p1@uc003ste.2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000451240_5end, CAGE_peak_1_at_uc003ste.2_5end |
| Coexpression cluster: | C794_small_signet_adenocarcinoma_colon_Hepatocyte_gall_liver |
| Association with transcript: | 264bp_to_ENST00000451240, uc003ste.2_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ENST00000451240p1@uc003ste.2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.01e-35 | 17 |
| small intestine | 2.00e-33 | 4 |
| gastrointestinal system | 9.50e-25 | 25 |
| colon | 7.75e-09 | 9 |
| large intestine | 2.16e-07 | 11 |
| duodenum | 2.32e-07 | 2 |
| gallbladder | 2.63e-07 | 3 |
| gall bladder primordium | 2.63e-07 | 3 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| signet ring cell adenocarcinoma | 1.89e-10 | 2 |
Showing 1 to 1 of 1 entries
