FFCP PHASE1:Hg19::chr7:16955957..16955989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:16955957..16955989,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr7:16955957..16955989,+ | |description=CAGE_peak_at_chr7:16955957..16955989,+ | ||
|id=chr7:16955957..16955989,+ | |id=chr7:16955957..16955989,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.70e-12!43;CL:0000066!3.95e-10!254;CL:0000223!8.02e-09!59;CL:0002251!1.83e-07!21 | |ontology_enrichment_celltype=CL:0002076!2.70e-12!43;CL:0000066!3.95e-10!254;CL:0000223!8.02e-09!59;CL:0002251!1.83e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002537;3.25e-10;5!CL:0000349;1.07e-08;19!CL:0002076;1.58e-08;42!CL:0002536;6.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.28e-10,5;CL:0002076,9.49e-09,42;CL:0000349,9.88e-09,19;CL:0000066,8.92e-08,253;CL:0000223,9.30e-08,58;CL:0002536,4.51e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.36e-07!106;DOID:1749!4.94e-07!14 | |ontology_enrichment_disease=DOID:305!1.36e-07!106;DOID:1749!4.94e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.22e-08,106;DOID:0050687,1.96e-07,143;DOID:1749,2.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.43e-15;7!UBERON:0000478;5.22e-15;24!UBERON:0005631;6.72e-14;10!UBERON:0000158;6.72e-14;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.54e-15,7;UBERON:0000478,3.91e-15,24;UBERON:0004871,2.62e-13,8;UBERON:0005631,2.30e-12,14;UBERON:0000158,2.30e-12,14 | |||
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| ||
|short_description=p@chr7:16955957..16955989,+ | |short_description=p@chr7:16955957..16955989,+ | ||
}} | }} |
Latest revision as of 08:10, 31 July 2015
Short description: | p@chr7:16955957..16955989, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:16955957..16955989, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.28e-10 | 5 |
endo-epithelial cell | 9.49e-09 | 42 |
extraembryonic cell | 9.88e-09 | 19 |
epithelial cell | 8.92e-08 | 253 |
endodermal cell | 9.30e-08 | 58 |
amniotic epithelial cell | 4.51e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.54e-15 | 7 |
extraembryonic structure | 3.91e-15 | 24 |
somatic layer of lateral plate mesoderm | 2.62e-13 | 8 |
extraembryonic membrane | 2.30e-12 | 14 |
membranous layer | 2.30e-12 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.22e-08 | 106 |
cell type cancer | 1.96e-07 | 143 |
squamous cell carcinoma | 2.73e-07 | 14 |