FFCP PHASE1:Hg19::chr7:2981171..2981174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:2981171..2981174,- | |||
|coexpression_cluster_id=C996 | |||
|description=CAGE_peak_at_chr7:2981171..2981174,- | |description=CAGE_peak_at_chr7:2981171..2981174,- | ||
|id=chr7:2981171..2981174,- | |id=chr7:2981171..2981174,- | ||
|ontology_enrichment_celltype=CL:0000542!6.19e-29!53;CL:0000051!6.19e-29!53;CL:0000838!5.11e-28!52;CL:0000945!6.86e-15!24;CL:0000826!6.86e-15!24;CL:0000791!1.54e-12!18;CL:0000789!1.54e-12!18;CL:0002420!1.54e-12!18;CL:0002419!1.54e-12!18;CL:0000790!1.54e-12!18;CL:0000738!8.58e-12!140;CL:0002087!1.26e-11!119;CL:0000084!2.63e-11!25;CL:0000827!2.63e-11!25;CL:0000236!6.11e-09!14;CL:0002031!2.15e-08!124;CL:0000624!6.82e-08!6;CL:0000988!2.13e-07!182;CL:0000037!2.18e-07!172;CL:0000566!2.18e-07!172 | |ontology_enrichment_celltype=CL:0000542!6.19e-29!53;CL:0000051!6.19e-29!53;CL:0000838!5.11e-28!52;CL:0000945!6.86e-15!24;CL:0000826!6.86e-15!24;CL:0000791!1.54e-12!18;CL:0000789!1.54e-12!18;CL:0002420!1.54e-12!18;CL:0002419!1.54e-12!18;CL:0000790!1.54e-12!18;CL:0000738!8.58e-12!140;CL:0002087!1.26e-11!119;CL:0000084!2.63e-11!25;CL:0000827!2.63e-11!25;CL:0000236!6.11e-09!14;CL:0002031!2.15e-08!124;CL:0000624!6.82e-08!6;CL:0000988!2.13e-07!182;CL:0000037!2.18e-07!172;CL:0000566!2.18e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.26e-19;18!CL:0000789;4.26e-19;18!CL:0002419;4.26e-19;18!CL:0000542;1.20e-18;53!CL:0000624;1.13e-15;6!CL:0000236;7.60e-14;13!CL:0000084;3.45e-13;25!CL:0000623;1.23e-12;3!CL:0000945;1.79e-11;24!CL:0000625;2.07e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.92e-30,52;CL:0000542,1.39e-29,53;CL:0000051,1.39e-29,53;CL:0000791,3.67e-19,18;CL:0000789,3.67e-19,18;CL:0002420,3.67e-19,18;CL:0002419,3.67e-19,18;CL:0000790,3.67e-19,18;CL:0000624,7.63e-16,6;CL:0002087,2.08e-14,115;CL:0000738,1.23e-13,136;CL:0000084,3.10e-13,25;CL:0000827,3.10e-13,25;CL:0000623,7.17e-13,3;CL:0000825,7.17e-13,3;CL:0000236,1.12e-12,14;CL:0000945,2.22e-11,24;CL:0000826,2.22e-11,24;CL:0002031,4.27e-11,120;CL:0000037,7.63e-10,168;CL:0000988,4.95e-09,177;CL:0000625,2.25e-08,11;CL:0002032,8.31e-08,161;CL:0000837,8.31e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.26e-19;18!CL:0000051;1.20e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.67e-14!15;UBERON:0000179!6.67e-14!15;UBERON:0000463!6.67e-14!15 | |ontology_enrichment_uberon=UBERON:0000178!6.67e-14!15;UBERON:0000179!6.67e-14!15;UBERON:0000463!6.67e-14!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.59e-19;15!UBERON:0000179;2.59e-19;15!UBERON:0000463;2.59e-19;15!UBERON:0002390;1.03e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.74e-19,15;UBERON:0000179,1.74e-19,15;UBERON:0000463,1.74e-19,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.656804715599566,0.787107813136792,0.393364276848904,2.30297638858328,0.928896739896456,0,0,0,2.09161441566814,1.42169232487422,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0.400395987036012,2.29900975981793,1.32208974556972,2.86216126360609,2.27685187643779,3.52342313622563,3.82273228125229,1.32171328579026,0,0,1.96709770113833,3.93010762749165,2.46721798799411,1.00311897234407,0.651844533267181,1.4203434172042,1.94826728407911,0.557052284425868,1.47302953737419,1.10766947291811,1.35401931882508,2.30564375506215,1.8208308658383,1.47994114143309,2.21080014228679,0.869409257205157,2.52087157375503,1.33770414044857,4.18142095219907,1.47302145506836,1.14966148080576,1.37450978193052,0.253019692019503,0.318565414324097,1.95325036156926,0,0.451725357233318,0.639933055772092,1.24930726552346,0,0,2.01606743224732,1.33720097891754,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,2.62339686735876,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.336255431980582,1.97030760201927,3.45004119775228,7.31555306794566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.50999940573032,0.74709290462411,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,0,0.229723400206959,2.02979043692868,0,1.70894156152249,1.90585420366231,3.29089818468955,0.648473311192717,2.16012574895246,3.17250070517708,0,0,0.245040215981032,0.929015875628594,0,0.355709216742071,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0,4.7896618469388,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.247127877893006,0.313265848516366,0.134802265961354,0,0,0.91227394607833,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0.627865836814451,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0.253243183823515,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0.745515213392595,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0.275078873194468,0,0,0,0.242998226632099,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,1.65695622138878,0.992332043623902,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0,0,0.179088841081487,1.23520578864389,0.657852148736121,0.176689145945881,0.771656153083659,0.337884881306145,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.203909198930495,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0.399764623699716,0,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.643264296743914,0.250707539292375,0,0,0,0.413731983447581,0.213233981900981,0,0.258355639344024,0.869046000142011,0,0.0636471582781649,0,0,0,1.34704106029175,0.286888821570705,0,0.407016343054873,0,0,0.359300808426348,0,0,0,0,0.805095174364105,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.656804715599566,0.787107813136792,0.393364276848904,2.30297638858328,0.928896739896456,0,0,0,2.09161441566814,1.42169232487422,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0.400395987036012,2.29900975981793,1.32208974556972,2.86216126360609,2.27685187643779,3.52342313622563,3.82273228125229,1.32171328579026,0,0,1.96709770113833,3.93010762749165,2.46721798799411,1.00311897234407,0.651844533267181,1.4203434172042,1.94826728407911,0.557052284425868,1.47302953737419,1.10766947291811,1.35401931882508,2.30564375506215,1.8208308658383,1.47994114143309,2.21080014228679,0.869409257205157,2.52087157375503,1.33770414044857,4.18142095219907,1.47302145506836,1.14966148080576,1.37450978193052,0.253019692019503,0.318565414324097,1.95325036156926,0,0.451725357233318,0.639933055772092,1.24930726552346,0,0,2.01606743224732,1.33720097891754,3.76543450095277,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,2.62339686735876,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.336255431980582,1.97030760201927,3.45004119775228,7.31555306794566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.50999940573032,0.74709290462411,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,1.68471475667626,0,0.229723400206959,2.02979043692868,0,1.70894156152249,1.90585420366231,3.29089818468955,0.648473311192717,2.16012574895246,3.17250070517708,0,0,0.245040215981032,0.929015875628594,0,0.355709216742071,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0,4.7896618469388,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.247127877893006,0.313265848516366,0.134802265961354,0,0,0.91227394607833,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0.627865836814451,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0.253243183823515,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0.745515213392595,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0.275078873194468,0,0,0,0.242998226632099,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,1.65695622138878,0.992332043623902,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0,0,0.179088841081487,1.23520578864389,0.657852148736121,0.176689145945881,0.771656153083659,0.337884881306145,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.203909198930495,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0.399764623699716,0,0,0.160482733378337,0,0.458729283404541,0.143339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.643264296743914,0.250707539292375,0,0,0,0.413731983447581,0.213233981900981,0,0.258355639344024,0.869046000142011,0,0.0636471582781649,0,0,0,1.34704106029175,0.286888821570705,0,0.407016343054873,0,0,0.359300808426348,0,0,0,0,0.805095174364105,0.641136984606466 | ||
|short_description=p@chr7:2981171..2981174,- | |short_description=p@chr7:2981171..2981174,- | ||
}} | }} |
Latest revision as of 09:16, 31 July 2015
Short description: | p@chr7:2981171..2981174, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:2981171..2981174, - |
Coexpression cluster: | C996_CD4_CD8_Natural_CD19_Whole_blood_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.92e-30 | 52 |
lymphocyte | 1.39e-29 | 53 |
common lymphoid progenitor | 1.39e-29 | 53 |
mature alpha-beta T cell | 3.67e-19 | 18 |
alpha-beta T cell | 3.67e-19 | 18 |
immature T cell | 3.67e-19 | 18 |
mature T cell | 3.67e-19 | 18 |
immature alpha-beta T cell | 3.67e-19 | 18 |
CD4-positive, alpha-beta T cell | 7.63e-16 | 6 |
nongranular leukocyte | 2.08e-14 | 115 |
leukocyte | 1.23e-13 | 136 |
T cell | 3.10e-13 | 25 |
pro-T cell | 3.10e-13 | 25 |
natural killer cell | 7.17e-13 | 3 |
pro-NK cell | 7.17e-13 | 3 |
B cell | 1.12e-12 | 14 |
lymphocyte of B lineage | 2.22e-11 | 24 |
pro-B cell | 2.22e-11 | 24 |
hematopoietic lineage restricted progenitor cell | 4.27e-11 | 120 |
hematopoietic stem cell | 7.63e-10 | 168 |
hematopoietic cell | 4.95e-09 | 177 |
CD8-positive, alpha-beta T cell | 2.25e-08 | 11 |
hematopoietic oligopotent progenitor cell | 8.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.31e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.74e-19 | 15 |
haemolymphatic fluid | 1.74e-19 | 15 |
organism substance | 1.74e-19 | 15 |