FFCP PHASE1:Hg19::chr7:91624917..91624985,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:91624917..91624985,+ | |||
|coexpression_cluster_id=C4706 | |||
|description=CAGE_peak_at_chr7:91624917..91624985,+ | |description=CAGE_peak_at_chr7:91624917..91624985,+ | ||
|id=chr7:91624917..91624985,+ | |id=chr7:91624917..91624985,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.15e-16!235;DOID:14566!3.88e-16!239;DOID:0050686!6.83e-10!137;DOID:0050687!2.80e-08!143 | |ontology_enrichment_disease=DOID:162!1.15e-16!235;DOID:14566!3.88e-16!239;DOID:0050686!6.83e-10!137;DOID:0050687!2.80e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.38e-11,235;DOID:14566,1.01e-10,239;DOID:0050686,4.90e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.45e-09!57;UBERON:0005068!3.45e-09!57;UBERON:0006241!3.45e-09!57;UBERON:0007135!3.45e-09!57;UBERON:0000073!5.64e-09!94;UBERON:0001016!5.64e-09!94;UBERON:0001017!7.61e-09!82;UBERON:0002780!3.69e-08!41;UBERON:0001890!3.69e-08!41;UBERON:0006240!3.69e-08!41;UBERON:0005743!4.92e-08!86;UBERON:0000955!9.92e-08!69;UBERON:0006238!9.92e-08!69;UBERON:0003080!1.57e-07!42;UBERON:0002616!1.85e-07!59;UBERON:0002020!6.00e-07!34;UBERON:0003528!6.00e-07!34 | |ontology_enrichment_uberon=UBERON:0001049!3.45e-09!57;UBERON:0005068!3.45e-09!57;UBERON:0006241!3.45e-09!57;UBERON:0007135!3.45e-09!57;UBERON:0000073!5.64e-09!94;UBERON:0001016!5.64e-09!94;UBERON:0001017!7.61e-09!82;UBERON:0002780!3.69e-08!41;UBERON:0001890!3.69e-08!41;UBERON:0006240!3.69e-08!41;UBERON:0005743!4.92e-08!86;UBERON:0000955!9.92e-08!69;UBERON:0006238!9.92e-08!69;UBERON:0003080!1.57e-07!42;UBERON:0002616!1.85e-07!59;UBERON:0002020!6.00e-07!34;UBERON:0003528!6.00e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.96e-08;41!UBERON:0001890;4.96e-08;41!UBERON:0000073;7.01e-08;53!UBERON:0002616;7.01e-08;53!UBERON:0000956;1.85e-07;25!UBERON:0000203;1.85e-07;25!UBERON:0002791;2.14e-07;32!UBERON:0002619;2.45e-07;22!UBERON:0003528;2.75e-07;34!UBERON:0002020;2.75e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.01e-13,56;UBERON:0005068,5.01e-13,56;UBERON:0006241,5.01e-13,56;UBERON:0007135,5.01e-13,56;UBERON:0000073,1.27e-12,53;UBERON:0002616,1.27e-12,53;UBERON:0001016,1.34e-12,89;UBERON:0001017,8.62e-12,81;UBERON:0000955,4.18e-11,68;UBERON:0006238,4.18e-11,68;UBERON:0002780,8.48e-11,41;UBERON:0001890,8.48e-11,41;UBERON:0003080,8.48e-11,41;UBERON:0006240,8.48e-11,41;UBERON:0002346,1.96e-10,86;UBERON:0003528,4.74e-09,34;UBERON:0002020,4.74e-09,34;UBERON:0003075,5.81e-09,82;UBERON:0007284,5.81e-09,82;UBERON:0002791,4.29e-08,32;UBERON:0000956,1.18e-07,25;UBERON:0000203,1.18e-07,25;UBERON:0002619,2.15e-07,22;UBERON:0001869,4.03e-07,32;UBERON:0001893,4.05e-07,34;UBERON:0003056,4.12e-07,61 | |||
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| ||
|short_description=p@chr7:91624917..91624985,+ | |short_description=p@chr7:91624917..91624985,+ | ||
}} | }} |
Latest revision as of 12:26, 31 July 2015
Short description: | p@chr7:91624917..91624985, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:91624917..91624985, + |
Coexpression cluster: | C4706_pineal_parietal_small_renal_Monocytederived_CD4_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.01e-13 | 56 |
neural rod | 5.01e-13 | 56 |
future spinal cord | 5.01e-13 | 56 |
neural keel | 5.01e-13 | 56 |
regional part of nervous system | 1.27e-12 | 53 |
regional part of brain | 1.27e-12 | 53 |
nervous system | 1.34e-12 | 89 |
central nervous system | 8.62e-12 | 81 |
brain | 4.18e-11 | 68 |
future brain | 4.18e-11 | 68 |
regional part of forebrain | 8.48e-11 | 41 |
forebrain | 8.48e-11 | 41 |
anterior neural tube | 8.48e-11 | 41 |
future forebrain | 8.48e-11 | 41 |
neurectoderm | 1.96e-10 | 86 |
brain grey matter | 4.74e-09 | 34 |
gray matter | 4.74e-09 | 34 |
neural plate | 5.81e-09 | 82 |
presumptive neural plate | 5.81e-09 | 82 |
regional part of telencephalon | 4.29e-08 | 32 |
cerebral cortex | 1.18e-07 | 25 |
pallium | 1.18e-07 | 25 |
regional part of cerebral cortex | 2.15e-07 | 22 |
cerebral hemisphere | 4.03e-07 | 32 |
telencephalon | 4.05e-07 | 34 |
pre-chordal neural plate | 4.12e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.38e-11 | 235 |
disease of cellular proliferation | 1.01e-10 | 239 |
organ system cancer | 4.90e-08 | 137 |