FFCP PHASE1:Hg19::chr8:11422197..11422208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK131319_5end | |association_with_transcript=0bp_to_AK131319_5end | ||
|cluster_id=chr8:11422197..11422208,- | |||
|description=CAGE_peak_1_at_AK131319_5end | |description=CAGE_peak_1_at_AK131319_5end | ||
|id=chr8:11422197..11422208,- | |id=chr8:11422197..11422208,- | ||
|ontology_enrichment_celltype=CL:0000784!5.06e-07!3 | |ontology_enrichment_celltype=CL:0000784!5.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.42e-30;3!CL:0002573;3.61e-14;2!CL:0002032;2.96e-11;1!CL:0000557;2.96e-11;1!CL:0000333;2.94e-09;5!CL:0000451;9.00e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.01e-31,3;CL:0002573,3.62e-14,2;CL:0000451,6.44e-09,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.96e-11;1!DOID:0060061;2.96e-11;1!DOID:3347;2.96e-11;1!DOID:4235;2.96e-11;1!DOID:8691;2.96e-11;1!DOID:169;7.43e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.42e-11,1;DOID:0060060,3.63e-11,1;DOID:0060061,3.63e-11,1;DOID:8691,3.63e-11,1;DOID:4235,4.91e-11,1;DOID:169,7.32e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;2.93e-18;8!UBERON:0000013;2.94e-09;5!UBERON:0002410;2.94e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.87e-18,8;UBERON:0000013,2.88e-09,5;UBERON:0002410,2.88e-09,5 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0.179389635688862,0,0,1.20036438433761,0,0.772921620136887,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,1.04171104434093,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,3.29658538429552,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0.664653872707185,0.661983911750998,0.313932918407225,1.19472429772959,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,1.35974509824151,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0,0.883445729729405,0.38582807654183,0,0,0,0,0.138258436151731,0,0,0,0,0,0,1.19992437512958,0.106691729694141,0,0.567515953566836,0,0,0,0,3.77386839888386,0,7.863093949825,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,1.3807198521202,0,0,0.20170506870352,0,0,0.818859587550484,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883606528698812,0.0657727735628491,0.354581522651905,0,0,0,0,0,0,0,0.0714765441766563,0.790068058663633,0.23248285073625,0,0,0,0,0,0,1.41998400876678,1.19298766662821,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,2.38740930193642,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0,0,1.18948980281472,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0.186224142887574,1.00918676322552,0.0636471582781649,0,0,0,0.875576689189638,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p1@AK131319 | |short_description=p1@AK131319 | ||
}} | }} | ||
Latest revision as of 14:07, 31 July 2015
| Short description: | p1@AK131319 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_AK131319_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_AK131319_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| plasmacytoid dendritic cell | 4.01e-31 | 3 |
| Schwann cell | 3.62e-14 | 2 |
| dendritic cell | 6.44e-09 | 10 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 2.87e-18 | 8 |
| sympathetic nervous system | 2.88e-09 | 5 |
| autonomic nervous system | 2.88e-09 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| osteosarcoma | 2.42e-11 | 1 |
| non-Hodgkin lymphoma | 3.63e-11 | 1 |
| cutaneous T cell lymphoma | 3.63e-11 | 1 |
| mycosis fungoides | 3.63e-11 | 1 |
| spindle cell sarcoma | 4.91e-11 | 1 |
| neuroendocrine tumor | 7.32e-08 | 6 |