FFCP PHASE1:Hg19::chr8:15364131..15364145,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:15364131..15364145,- to FFCP PHASE1:Hg19::chr8:15364131..15364145,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:15364131..15364145,- | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr8:15364131..15364145,- | |||
|id=chr8:15364131..15364145,- | |||
|ontology_enrichment_celltype=CL:0002590!1.31e-10!3;CL:0000066!1.52e-10!254;CL:0002159!7.96e-08!13;CL:0000575!2.68e-07!2;CL:0002536!4.56e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.17e-09;2!CL:0000322;5.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.22e-09,2;CL:0000322,5.80e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.44e-18;1 | |||
|ontology_enrichment_disease=DOID:305!6.20e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1325;1.43e-10;7!DOID:3904;1.43e-10;7!DOID:3910;7.98e-10;2!DOID:4468;9.06e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.39e-10,7;DOID:3904,1.39e-10,7;DOID:3910,7.98e-10,2;DOID:4468,9.46e-10,2;DOID:305,2.67e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.19e-07!4;UBERON:0003928!1.19e-07!4;UBERON:0005631!1.21e-07!14;UBERON:0000158!1.21e-07!14;UBERON:0002294!1.48e-07!7;UBERON:0001173!1.48e-07!7;UBERON:0004912!1.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;2.13e-10;7!UBERON:0001173;2.13e-10;7!UBERON:0004903;7.98e-10;2!UBERON:0002173;7.98e-10;2!UBERON:0002186;7.98e-10;2!UBERON:0000058;1.31e-07;10!UBERON:0004821;5.80e-07;3!UBERON:0007499;5.80e-07;3!UBERON:0003215;5.80e-07;3!UBERON:0010368;5.80e-07;3!UBERON:0009911;5.80e-07;3!UBERON:0002299;5.80e-07;3!UBERON:0006524;5.80e-07;3!UBERON:0008874;5.80e-07;3!UBERON:0002169;5.80e-07;3!UBERON:0004894;5.80e-07;3!UBERON:0002110;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.98e-10,2;UBERON:0002173,7.98e-10,2;UBERON:0002186,7.98e-10,2;UBERON:0002294,2.85e-08,9;UBERON:0001173,2.85e-08,9;UBERON:0004912,2.85e-08,9;UBERON:0005911,4.54e-07,82;UBERON:0004821,5.80e-07,3;UBERON:0003215,5.80e-07,3;UBERON:0010368,5.80e-07,3;UBERON:0009911,5.80e-07,3;UBERON:0002299,5.80e-07,3;UBERON:0006524,5.80e-07,3;UBERON:0008874,5.80e-07,3;UBERON:0002169,5.80e-07,3;UBERON:0004894,5.80e-07,3;UBERON:0002110,7.70e-07,3;UBERON:0006242,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0.100528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.95339771567235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.00119938235739,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.953150969619124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,1.25815691606258,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,12.7126825146383,2.6002644994473,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,4.40728582029699,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,2.00397050628834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0,0,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63679717666819,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6819779387092,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0.100528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.95339771567235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,1.00119938235739,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.953150969619124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,1.25815691606258,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,12.7126825146383,2.6002644994473,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,4.40728582029699,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,2.00397050628834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0,0,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63679717666819,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6819779387092,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:15364131..15364145,- | |||
}} | }} |
Latest revision as of 16:18, 31 July 2015
Short description: | p@chr8:15364131..15364145, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:15364131..15364145, - |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.22e-09 | 2 |
pneumocyte | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.98e-10 | 2 |
alveolar duct | 7.98e-10 | 2 |
bronchiole | 7.98e-10 | 2 |
biliary system | 2.85e-08 | 9 |
biliary tree | 2.85e-08 | 9 |
biliary bud | 2.85e-08 | 9 |
endo-epithelium | 4.54e-07 | 82 |
pulmonary alveolus epithelium | 5.80e-07 | 3 |
alveolus | 5.80e-07 | 3 |
pulmonary lobule | 5.80e-07 | 3 |
lobule | 5.80e-07 | 3 |
alveolus of lung | 5.80e-07 | 3 |
alveolar system | 5.80e-07 | 3 |
pulmonary acinus | 5.80e-07 | 3 |
alveolar sac | 5.80e-07 | 3 |
alveolar wall | 5.80e-07 | 3 |
gallbladder | 7.70e-07 | 3 |
gall bladder primordium | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.39e-10 | 7 |
bronchogenic carcinoma | 1.39e-10 | 7 |
lung adenocarcinoma | 7.98e-10 | 2 |
clear cell adenocarcinoma | 9.46e-10 | 2 |
carcinoma | 2.67e-07 | 106 |