FFCP PHASE1:Hg19::chr8:96701429..96701463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:96701429..96701463,- | |||
|coexpression_cluster_id=C1896 | |coexpression_cluster_id=C1896 | ||
|description=CAGE_peak_at_chr8:96701429..96701463,- | |description=CAGE_peak_at_chr8:96701429..96701463,- | ||
|id=chr8:96701429..96701463,- | |id=chr8:96701429..96701463,- | ||
|ontology_enrichment_celltype=CL:0002589!6.61e-50!2;CL:0002595!6.65e-21!5;CL:0000359!1.17e-19!32;CL:0000192!4.67e-15!42;CL:0000514!4.67e-15!42;CL:0000187!9.00e-12!54;CL:0000680!3.64e-11!57;CL:0000056!3.64e-11!57;CL:0000355!3.64e-11!57;CL:0000183!8.54e-11!59;CL:0000393!1.28e-10!60;CL:0000211!1.28e-10!60;CL:0002592!1.01e-09!3;CL:0000068!1.81e-09!3;CL:0000069!1.81e-09!3;CL:0000307!1.81e-09!3;CL:0000377!1.81e-09!3 | |ontology_enrichment_celltype=CL:0002589!6.61e-50!2;CL:0002595!6.65e-21!5;CL:0000359!1.17e-19!32;CL:0000192!4.67e-15!42;CL:0000514!4.67e-15!42;CL:0000187!9.00e-12!54;CL:0000680!3.64e-11!57;CL:0000056!3.64e-11!57;CL:0000355!3.64e-11!57;CL:0000183!8.54e-11!59;CL:0000393!1.28e-10!60;CL:0000211!1.28e-10!60;CL:0002592!1.01e-09!3;CL:0000068!1.81e-09!3;CL:0000069!1.81e-09!3;CL:0000307!1.81e-09!3;CL:0000377!1.81e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002592;2.39e-66;3!CL:0002494;8.02e-14;16!CL:0000359;4.53e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.39e-66,3;CL:0002494,8.02e-14,16;CL:0000359,1.18e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003498;2.39e-66;3!UBERON:0005985;2.39e-66;3!UBERON:0001621;2.39e-66;3!UBERON:0000948;1.80e-10;22!UBERON:0007100;2.15e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,2.39e-66,3;UBERON:0003498,1.48e-40,5;UBERON:0005985,1.48e-40,5;UBERON:0000948,1.01e-09,24;UBERON:0005498,1.01e-09,24;UBERON:0004140,1.01e-09,24;UBERON:0009881,1.01e-09,24;UBERON:0004141,1.01e-09,24;UBERON:0003084,1.01e-09,24;UBERON:0007005,1.01e-09,24;UBERON:0004139,1.01e-09,24;UBERON:0004291,1.01e-09,24;UBERON:0007100,8.32e-09,27;UBERON:0004573,1.82e-07,33;UBERON:0004571,1.82e-07,33 | |||
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|short_description=p@chr8:96701429..96701463,- | |short_description=p@chr8:96701429..96701463,- | ||
}} | }} |
Latest revision as of 20:43, 31 July 2015
Short description: | p@chr8:96701429..96701463, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:96701429..96701463, - |
Coexpression cluster: | C1896_Smooth_mesenchymal_heart_tongue_left_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.39e-66 | 3 |
cardiocyte | 8.02e-14 | 16 |
vascular associated smooth muscle cell | 1.18e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 2.39e-66 | 3 |
heart blood vessel | 1.48e-40 | 5 |
coronary vessel | 1.48e-40 | 5 |
heart | 1.01e-09 | 24 |
primitive heart tube | 1.01e-09 | 24 |
primary heart field | 1.01e-09 | 24 |
anterior lateral plate mesoderm | 1.01e-09 | 24 |
heart tube | 1.01e-09 | 24 |
heart primordium | 1.01e-09 | 24 |
cardiac mesoderm | 1.01e-09 | 24 |
cardiogenic plate | 1.01e-09 | 24 |
heart rudiment | 1.01e-09 | 24 |
primary circulatory organ | 8.32e-09 | 27 |
systemic artery | 1.82e-07 | 33 |
systemic arterial system | 1.82e-07 | 33 |