FFCP PHASE1:Hg19::chr9:118358956..118358970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:118358956..118358970,+ | |||
|coexpression_cluster_id=C4793 | |coexpression_cluster_id=C4793 | ||
|description=CAGE_peak_at_chr9:118358956..118358970,+ | |description=CAGE_peak_at_chr9:118358956..118358970,+ | ||
|id=chr9:118358956..118358970,+ | |id=chr9:118358956..118358970,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.16e-50!180;CL:0000057!2.29e-26!75;CL:0000680!1.88e-23!57;CL:0000056!1.88e-23!57;CL:0000355!1.88e-23!57;CL:0000187!3.13e-23!54;CL:0000359!1.67e-20!32;CL:0000183!9.06e-20!59;CL:0000393!3.74e-19!60;CL:0000211!3.74e-19!60;CL:0000192!1.57e-17!42;CL:0000514!1.57e-17!42;CL:0002620!9.64e-16!23;CL:0000048!5.57e-15!430;CL:0000723!4.25e-14!436;CL:0000034!2.67e-13!444;CL:0000144!9.93e-13!625;CL:0002371!7.40e-12!591;CL:0002494!1.26e-11!16;CL:0000548!1.92e-09!679;CL:0000004!1.92e-09!679;CL:0000255!1.92e-09!679;CL:0000012!4.05e-09!682;CL:0000222!5.18e-09!119;CL:0002539!6.00e-08!10;CL:0000220!3.22e-07!246;CL:0002321!5.62e-07!248;CL:0002334!6.08e-07!12 | |ontology_enrichment_celltype=CL:0000055!6.16e-50!180;CL:0000057!2.29e-26!75;CL:0000680!1.88e-23!57;CL:0000056!1.88e-23!57;CL:0000355!1.88e-23!57;CL:0000187!3.13e-23!54;CL:0000359!1.67e-20!32;CL:0000183!9.06e-20!59;CL:0000393!3.74e-19!60;CL:0000211!3.74e-19!60;CL:0000192!1.57e-17!42;CL:0000514!1.57e-17!42;CL:0002620!9.64e-16!23;CL:0000048!5.57e-15!430;CL:0000723!4.25e-14!436;CL:0000034!2.67e-13!444;CL:0000144!9.93e-13!625;CL:0002371!7.40e-12!591;CL:0002494!1.26e-11!16;CL:0000548!1.92e-09!679;CL:0000004!1.92e-09!679;CL:0000255!1.92e-09!679;CL:0000012!4.05e-09!682;CL:0000222!5.18e-09!119;CL:0002539!6.00e-08!10;CL:0000220!3.22e-07!246;CL:0002321!5.62e-07!248;CL:0002334!6.08e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.23e-22;32!CL:0002620;1.13e-13;23!CL:0002494;9.43e-12;16!CL:0002539;2.15e-11;10!CL:0000192;7.43e-11;43!CL:0000187;1.33e-10;55!CL:0000393;2.59e-09;61!CL:0000211;2.59e-09;61!CL:0000057;3.39e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.85e-23,32;CL:0000057,1.01e-19,76;CL:0000187,1.13e-19,55;CL:0000680,2.12e-19,58;CL:0000056,2.12e-19,58;CL:0000355,2.12e-19,58;CL:0000393,1.05e-16,61;CL:0000211,1.05e-16,61;CL:0000048,5.37e-16,427;CL:0000723,2.39e-15,433;CL:0000192,6.16e-15,43;CL:0000514,6.16e-15,43;CL:0000034,1.63e-14,441;CL:0002620,1.30e-13,23;CL:0002494,6.36e-12,16;CL:0002539,1.28e-11,10;CL:0000222,2.68e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;7.43e-11;43!CL:0000355;9.52e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.58e-08;5!DOID:450;2.58e-08;5!DOID:66;2.58e-08;5!DOID:423;2.58e-08;5!DOID:0080000;2.58e-08;5!DOID:11722;2.58e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.83e-08,5;DOID:450,2.83e-08,5;DOID:66,2.83e-08,5;DOID:423,2.83e-08,5;DOID:0080000,2.83e-08,5;DOID:11722,2.83e-08,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;9.74e-15;33!UBERON:0004571;9.74e-15;33!UBERON:0001637;5.77e-12;42!UBERON:0003509;5.77e-12;42!UBERON:0004572;5.77e-12;42!UBERON:0004237;2.15e-11;10!UBERON:0004695;2.15e-11;10!UBERON:0002111;2.15e-11;10!UBERON:0004178;2.15e-11;10!UBERON:0000947;5.01e-08;21!UBERON:0010191;5.01e-08;21!UBERON:0002097;8.54e-08;41!UBERON:0000948;1.24e-07;22!UBERON:0002385;2.41e-07;31!UBERON:0001015;2.41e-07;31!UBERON:0000383;2.41e-07;31!UBERON:0001135;7.59e-07;15 | |||
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| ||
|short_description=p@chr9:118358956..118358970,+ | |short_description=p@chr9:118358956..118358970,+ | ||
}} | }} |
Latest revision as of 22:10, 31 July 2015
Short description: | p@chr9:118358956..118358970, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118358956..118358970, + |
Coexpression cluster: | C4793_Fibroblast_Hair_Skeletal_mesodermal_Preadipocyte_neuroectodermal_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.85e-23 | 32 |
fibroblast | 1.01e-19 | 76 |
muscle cell | 1.13e-19 | 55 |
muscle precursor cell | 2.12e-19 | 58 |
myoblast | 2.12e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.12e-19 | 58 |
electrically responsive cell | 1.05e-16 | 61 |
electrically active cell | 1.05e-16 | 61 |
multi fate stem cell | 5.37e-16 | 427 |
somatic stem cell | 2.39e-15 | 433 |
smooth muscle cell | 6.16e-15 | 43 |
smooth muscle myoblast | 6.16e-15 | 43 |
stem cell | 1.63e-14 | 441 |
skin fibroblast | 1.30e-13 | 23 |
cardiocyte | 6.36e-12 | 16 |
aortic smooth muscle cell | 1.28e-11 | 10 |
mesodermal cell | 2.68e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.83e-08 | 5 |
myotonic disease | 2.83e-08 | 5 |
muscle tissue disease | 2.83e-08 | 5 |
myopathy | 2.83e-08 | 5 |
muscular disease | 2.83e-08 | 5 |
myotonic dystrophy | 2.83e-08 | 5 |