FFCP PHASE1:Hg19::chr9:118412488..118412525,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:118412488..118412525,-
|short_description=p@chr9:118412488..118412525,-
|description=CAGE_peak_at_chr9:118412488..118412525,-
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:118412488..118412525,- | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr9:118412488..118412525,- | |||
|id=chr9:118412488..118412525,- | |||
|ontology_enrichment_celltype=CL:0000055!4.96e-20!180;CL:0000187!7.25e-20!54;CL:0000680!1.25e-19!57;CL:0000056!1.25e-19!57;CL:0000355!1.25e-19!57;CL:0000359!3.13e-19!32;CL:0000183!1.37e-18!59;CL:0000393!7.45e-17!60;CL:0000211!7.45e-17!60;CL:0000192!1.74e-15!42;CL:0000514!1.74e-15!42;CL:0000222!4.66e-12!119;CL:0002539!1.67e-11!10;CL:0000548!1.52e-08!679;CL:0000004!1.52e-08!679;CL:0000255!1.52e-08!679;CL:0000012!2.37e-08!682;CL:0002494!3.27e-08!16;CL:0000048!3.84e-08!430;CL:0000220!4.28e-08!246;CL:0000723!4.48e-08!436;CL:0002321!6.63e-08!248;CL:0000144!7.42e-08!625;CL:0000034!1.64e-07!444;CL:0002371!8.21e-07!591;CL:0000057!8.43e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000569;3.70e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.35e-10,4;CL:0000011,4.35e-10,4 | |||
|ontology_enrichment_development_v019=CL:0000011;3.70e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!1.54e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;6.73e-11;1!DOID:3165;6.73e-11;1!DOID:0060121;6.73e-11;1!DOID:2438;6.73e-11;1!DOID:4418;6.73e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.73e-11,1;DOID:3165,6.73e-11,1;DOID:0060121,6.73e-11,1;DOID:2438,6.73e-11,1;DOID:4418,6.73e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.73e-20!70;UBERON:0000486!9.19e-18!82;UBERON:0001637!9.54e-18!42;UBERON:0003509!9.54e-18!42;UBERON:0004572!9.54e-18!42;UBERON:0001134!1.19e-17!61;UBERON:0002036!1.19e-17!61;UBERON:0003082!1.19e-17!61;UBERON:0000914!3.12e-17!83;UBERON:0002329!3.12e-17!83;UBERON:0003077!3.12e-17!83;UBERON:0003059!3.12e-17!83;UBERON:0007282!3.12e-17!83;UBERON:0009618!3.12e-17!83;UBERON:0007285!3.12e-17!83;UBERON:0004573!5.84e-17!33;UBERON:0004571!5.84e-17!33;UBERON:0002385!9.28e-17!63;UBERON:0001015!9.28e-17!63;UBERON:0000383!9.28e-17!63;UBERON:0005256!1.54e-15!143;UBERON:0004872!1.84e-13!84;UBERON:0003914!1.98e-13!118;UBERON:0001981!6.47e-12!60;UBERON:0007500!6.47e-12!60;UBERON:0004537!6.47e-12!60;UBERON:0006965!6.47e-12!60;UBERON:0004237!1.67e-11!10;UBERON:0004695!1.67e-11!10;UBERON:0002111!1.67e-11!10;UBERON:0004178!1.67e-11!10;UBERON:0000055!4.63e-11!69;UBERON:0000490!7.45e-11!138;UBERON:0004535!8.85e-10!110;UBERON:0002049!2.77e-09!79;UBERON:0007798!2.77e-09!79;UBERON:0001009!3.05e-09!113;UBERON:0002100!1.05e-08!216;UBERON:0000947!3.38e-08!21;UBERON:0010191!3.38e-08!21;UBERON:0000119!4.21e-08!312;UBERON:0000483!6.33e-08!309;UBERON:0002199!6.42e-08!45;UBERON:0002416!6.42e-08!45;UBERON:0001135!6.21e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,2.25095607382472,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,1.1409436430889,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0.561320188866147,0,0,0,0,0.462629081407967,0.355123450626254,1.06765302817952,0,0.464841513839837,0,0.200506470303285,0,0,0.728364672026868,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,1.45006077438183,0.462145851343933,0.15350367472613,0.275673144969061,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.715624433709956,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0.272999822815972,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33926115068718,0,0,0,0,0,0,0,0.311039587661807,1.88723537409386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,1.78154502040776,21.4611780639229,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,2.39460383124975,0,0.851940108927109,1.69968137280189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.895528817321244,0.467426619694449,0,0.568209015825267,0.251567901752575,0,4.57680136793847,0.151230923763239,1.08806040407946,0.591420599958536,0.63718706865481,0,0.776314784381297,2.07353103920428,0.265841714557995,1.04349012362347,0.450772826991655,0,0.813741466409323,0.909243296012797,0.537052785212442,0.464033759878494,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,1.62065732026684,0,3.58177682162975,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.0085253435176,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,8.82237179289229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0.640364075266293,0,0,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,2.25095607382472,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,1.1409436430889,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0.561320188866147,0,0,0,0,0.462629081407967,0.355123450626254,1.06765302817952,0,0.464841513839837,0,0.200506470303285,0,0,0.728364672026868,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,1.45006077438183,0.462145851343933,0.15350367472613,0.275673144969061,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0,0,0.464845549297286,1.25924938732256,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.715624433709956,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0.272999822815972,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33926115068718,0,0,0,0,0,0,0,0.311039587661807,1.88723537409386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,1.78154502040776,21.4611780639229,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,2.39460383124975,0,0.851940108927109,1.69968137280189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.895528817321244,0.467426619694449,0,0.568209015825267,0.251567901752575,0,4.57680136793847,0.151230923763239,1.08806040407946,0.591420599958536,0.63718706865481,0,0.776314784381297,2.07353103920428,0.265841714557995,1.04349012362347,0.450772826991655,0,0.813741466409323,0.909243296012797,0.537052785212442,0.464033759878494,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,1.62065732026684,0,3.58177682162975,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.0085253435176,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,8.82237179289229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0.640364075266293,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:118412488..118412525,- | |||
}} | }} |
Latest revision as of 22:10, 31 July 2015
Short description: | p@chr9:118412488..118412525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118412488..118412525, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.35e-10 | 4 |
migratory trunk neural crest cell | 4.35e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.73e-11 | 1 |
skin benign neoplasm | 6.73e-11 | 1 |
integumentary system benign neoplasm | 6.73e-11 | 1 |
dermis tumor | 6.73e-11 | 1 |
cutaneous fibrous histiocytoma | 6.73e-11 | 1 |