FFCP PHASE1:Hg19::chr9:120228535..120228539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436524_5end | |association_with_transcript=0bp_to_ENST00000436524_5end | ||
|cluster_id=chr9:120228535..120228539,- | |||
|coexpression_cluster_id=C245 | |coexpression_cluster_id=C245 | ||
|description=CAGE_peak_1_at_ENST00000436524_5end | |description=CAGE_peak_1_at_ENST00000436524_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002535!1.33e-15!2 | |ontology_enrichment_celltype=CL:0002535!1.33e-15!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.52e-50;2 | |ontology_enrichment_celltype_v019=CL:0002535;3.52e-50;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-50,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;5.04e-34;3!UBERON:0003353;5.04e-34;3 | |ontology_enrichment_development_v019=UBERON:0009847;5.04e-34;3!UBERON:0003353;5.04e-34;3 | ||
|ontology_enrichment_disease=DOID:4556!1.09e-10!3;DOID:4362!5.08e-07!5;DOID:3908!6.39e-07!5 | |ontology_enrichment_disease=DOID:4556!1.09e-10!3;DOID:4362!5.08e-07!5;DOID:3908!6.39e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;4.66e-21;5 | |ontology_enrichment_disease_v019=DOID:4362;4.66e-21;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,5.15e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0000989!1.33e-29!1;UBERON:0008811!1.33e-29!1;UBERON:0006258!1.33e-29!1;UBERON:0005876!1.33e-29!1;UBERON:0004874!1.33e-29!1;UBERON:0006955!1.33e-15!2;UBERON:0004801!1.33e-15!2 | |ontology_enrichment_uberon=UBERON:0000989!1.33e-29!1;UBERON:0008811!1.33e-29!1;UBERON:0006258!1.33e-29!1;UBERON:0005876!1.33e-29!1;UBERON:0004874!1.33e-29!1;UBERON:0006955!1.33e-15!2;UBERON:0004801!1.33e-15!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.52e-50;2!UBERON:0004801;3.52e-50;2!UBERON:0000002;8.34e-18;6!UBERON:0001560;8.34e-18;6!UBERON:0002367;2.27e-10;11!UBERON:0010147;2.27e-10;11!UBERON:0003937;1.27e-09;12!UBERON:0005399;1.27e-09;12!UBERON:0000995;3.48e-07;17!UBERON:0003975;7.39e-07;18!UBERON:0005156;7.94e-07;59!UBERON:0000990;7.94e-07;59 | |ontology_enrichment_uberon_v019=UBERON:0006955;3.52e-50;2!UBERON:0004801;3.52e-50;2!UBERON:0000002;8.34e-18;6!UBERON:0001560;8.34e-18;6!UBERON:0002367;2.27e-10;11!UBERON:0010147;2.27e-10;11!UBERON:0003937;1.27e-09;12!UBERON:0005399;1.27e-09;12!UBERON:0000995;3.48e-07;17!UBERON:0003975;7.39e-07;18!UBERON:0005156;7.94e-07;59!UBERON:0000990;7.94e-07;59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.52e-50,2;UBERON:0004801,4.52e-50,2;UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6;UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p1@ENST00000436524 | |short_description=p1@ENST00000436524 | ||
}} | }} |
Latest revision as of 22:15, 31 July 2015
Short description: | p1@ENST00000436524 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000436524_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | 0bp_to_ENST00000436524_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.52e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.52e-50 | 2 |
cervix epithelium | 4.52e-50 | 2 |
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
prostate gland | 2.16e-10 | 11 |
male accessory sex gland | 2.16e-10 | 11 |
embryonic cloacal epithelium | 2.16e-10 | 11 |
epithelium of hindgut | 2.16e-10 | 11 |
urogenital sinus epithelium | 2.16e-10 | 11 |
prostate bud | 2.16e-10 | 11 |
prostate field | 2.16e-10 | 11 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.15e-21 | 5 |