FFCP PHASE1:Hg19::chr9:130914175..130914189,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130914175..130914189,+ | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_at_chr9:130914175..130914189,+ | |description=CAGE_peak_at_chr9:130914175..130914189,+ | ||
|id=chr9:130914175..130914189,+ | |id=chr9:130914175..130914189,+ | ||
|ontology_enrichment_celltype=CL:0002076!6.03e-13!43;CL:0000223!2.30e-10!59;CL:1000415!5.55e-10!2;CL:0000066!1.63e-08!254;CL:0002178!3.70e-07!3;CL:0002231!3.93e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.03e-13!43;CL:0000223!2.30e-10!59;CL:1000415!5.55e-10!2;CL:0000066!1.63e-08!254;CL:0002178!3.70e-07!3;CL:0002231!3.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.97e-19;1!CL:1000600;2.97e-19;1!CL:0002231;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.71e-19,1;CL:1000600,2.71e-19,1;CL:0002231,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.97e-19;1!UBERON:0008814;2.60e-10;2!UBERON:0010056;2.60e-10;2 | |||
|ontology_enrichment_disease=DOID:305!1.20e-15!106;DOID:1749!4.71e-15!14;DOID:299!2.63e-13!25;DOID:0050687!2.72e-10!143;DOID:3493!5.81e-10!2;DOID:4929!7.28e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.99e-10,2;DOID:305,5.21e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002294!7.04e-16!7;UBERON:0001173!7.04e-16!7;UBERON:0004912!7.04e-16!7;UBERON:0004119!3.51e-13!169;UBERON:0000925!3.51e-13!169;UBERON:0006595!3.51e-13!169;UBERON:0001007!2.63e-12!155;UBERON:0001555!2.63e-12!155;UBERON:0007026!2.63e-12!155;UBERON:0000077!1.08e-11!130;UBERON:0002394!1.11e-10!4;UBERON:0003928!1.11e-10!4;UBERON:0003127!1.60e-10!2;UBERON:0004921!1.63e-10!129;UBERON:0004185!1.63e-10!129;UBERON:0001041!2.09e-09!98;UBERON:0001004!3.13e-09!72;UBERON:0000466!1.72e-08!126;UBERON:0000065!3.82e-08!53;UBERON:0005911!1.06e-07!82;UBERON:0000464!1.70e-07!104;UBERON:0000161!3.84e-07!35;UBERON:0002110!6.36e-07!3;UBERON:0006242!6.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;2.97e-19;1!UBERON:0004645;2.97e-19;1!UBERON:0001256;2.97e-19;1!UBERON:0001259;2.97e-19;1!UBERON:0006562;1.72e-10;2!UBERON:0001255;2.60e-10;2!UBERON:0003127;2.60e-10;2!UBERON:0001829;2.60e-10;2!UBERON:0001556;2.60e-10;2!UBERON:0001723;2.71e-07;3!UBERON:0001033;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,1.56e-19,1;UBERON:0006298,1.56e-19,1;UBERON:0004645,2.71e-19,1;UBERON:0001256,2.71e-19,1;UBERON:0001259,2.71e-19,1;UBERON:0001829,1.89e-10,2;UBERON:0003127,2.27e-10,2;UBERON:0001255,2.49e-10,2;UBERON:0001556,2.49e-10,2;UBERON:0000161,2.30e-08,36;UBERON:0006562,1.73e-07,11;UBERON:0001723,3.35e-07,3;UBERON:0001033,3.35e-07,3;UBERON:0010056,3.35e-07,3;UBERON:0004921,4.34e-07,118 | |||
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| ||
|short_description=p@chr9:130914175..130914189,+ | |short_description=p@chr9:130914175..130914189,+ | ||
}} | }} |
Latest revision as of 23:07, 31 July 2015
Short description: | p@chr9:130914175..130914189, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130914175..130914189, + |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.71e-19 | 1 |
lower urinary tract cell | 2.71e-19 | 1 |
epithelial cell of prostate | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 1.56e-19 | 1 |
submandibular gland primordium | 1.56e-19 | 1 |
urinary bladder urothelium | 2.71e-19 | 1 |
wall of urinary bladder | 2.71e-19 | 1 |
mucosa of urinary bladder | 2.71e-19 | 1 |
major salivary gland | 1.89e-10 | 2 |
open tracheal system trachea | 2.27e-10 | 2 |
urinary bladder | 2.49e-10 | 2 |
lower urinary tract | 2.49e-10 | 2 |
orifice | 2.30e-08 | 36 |
pharynx | 1.73e-07 | 11 |
tongue | 3.35e-07 | 3 |
gustatory system | 3.35e-07 | 3 |
future tongue | 3.35e-07 | 3 |
subdivision of digestive tract | 4.34e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.99e-10 | 2 |
carcinoma | 5.21e-08 | 106 |