FFCP PHASE1:Hg19::chr9:13432977..13433050,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:13432977..13433050,- | |||
|coexpression_cluster_id=C1506 | |||
|description=CAGE_peak_at_chr9:13432977..13433050,- | |description=CAGE_peak_at_chr9:13432977..13433050,- | ||
|id=chr9:13432977..13433050,- | |id=chr9:13432977..13433050,- | ||
|ontology_enrichment_celltype=CL:0002139!5.03e-36!24;CL:0000115!2.23e-33!35;CL:0000071!5.14e-27!18;CL:0002546!5.14e-27!18;CL:0002078!2.83e-24!44;CL:0000213!2.41e-16!57;CL:0000215!2.41e-16!57;CL:1000413!2.61e-14!9;CL:0005020!1.58e-10!6;CL:0002138!1.58e-10!6;CL:0005022!1.58e-10!6;CL:0002544!5.07e-10!6;CL:0002543!7.69e-10!6;CL:0000222!2.93e-09!119;CL:0000076!5.70e-08!62;CL:0000622!9.76e-08!5 | |ontology_enrichment_celltype=CL:0002139!5.03e-36!24;CL:0000115!2.23e-33!35;CL:0000071!5.14e-27!18;CL:0002546!5.14e-27!18;CL:0002078!2.83e-24!44;CL:0000213!2.41e-16!57;CL:0000215!2.41e-16!57;CL:1000413!2.61e-14!9;CL:0005020!1.58e-10!6;CL:0002138!1.58e-10!6;CL:0005022!1.58e-10!6;CL:0002544!5.07e-10!6;CL:0002543!7.69e-10!6;CL:0000222!2.93e-09!119;CL:0000076!5.70e-08!62;CL:0000622!9.76e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.33e-80;24!CL:0000115;1.92e-63;36!CL:0000071;3.24e-59;18!CL:0002078;2.96e-37;45!CL:1000413;2.51e-30;9!CL:0000213;3.28e-27;58!CL:0000215;3.28e-27;58!CL:0002138;8.81e-22;6!CL:0002544;1.27e-20;6!CL:0002543;3.21e-20;6!CL:0000076;5.29e-12;63!CL:0002144;7.35e-12;3!CL:0002188;5.99e-11;5!CL:0002618;7.57e-11;3!CL:0000622;1.70e-10;5!CL:0000154;9.36e-09;6!CL:0002545;4.53e-08;2!CL:1000746;7.98e-08;7!CL:1000612;7.98e-08;7!CL:0000317;2.99e-07;2!CL:1000448;2.99e-07;2!CL:0002308;2.99e-07;2!CL:0002140;2.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.90e-80,24;CL:0000115,2.46e-75,36;CL:0000071,3.09e-59,18;CL:0002546,3.09e-59,18;CL:0002078,1.19e-58,45;CL:0000213,1.07e-43,58;CL:0000215,1.07e-43,58;CL:1000413,2.43e-30,9;CL:0000222,2.19e-24,121;CL:0005020,8.82e-22,6;CL:0002138,8.82e-22,6;CL:0005022,8.82e-22,6;CL:0000076,1.20e-20,63;CL:0002544,1.23e-20,6;CL:0002543,3.16e-20,6;CL:0002321,1.07e-12,250;CL:0002144,7.35e-12,3;CL:0002188,6.40e-11,5;CL:0002618,7.57e-11,3;CL:0000622,1.50e-10,5;CL:0000066,2.28e-09,253;CL:0000154,8.43e-09,6;CL:0002545,4.46e-08,2;CL:1000746,8.35e-08,7;CL:1000612,8.35e-08,7;CL:0000317,2.54e-07,2;CL:1000448,2.54e-07,2;CL:0002308,2.54e-07,2;CL:0002140,2.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;3.24e-59;18!CL:0005022;8.81e-22;6!CL:0000222;1.26e-09;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.14e-27!18;UBERON:0004638!5.14e-27!18;UBERON:0004852!5.14e-27!18;UBERON:0000055!8.79e-26!69;UBERON:0004111!8.38e-23!241;UBERON:0000487!7.04e-21!22;UBERON:0002049!9.86e-21!79;UBERON:0007798!9.86e-21!79;UBERON:0000477!1.27e-20!286;UBERON:0004872!8.95e-20!84;UBERON:0004535!1.86e-19!110;UBERON:0001009!1.97e-19!113;UBERON:0001981!3.05e-19!60;UBERON:0007500!3.05e-19!60;UBERON:0004537!3.05e-19!60;UBERON:0006965!3.05e-19!60;UBERON:0006914!1.37e-17!25;UBERON:0000025!2.96e-16!194;UBERON:0003914!1.80e-14!118;UBERON:0003915!2.61e-14!9;UBERON:0004700!2.61e-14!9;UBERON:0001917!2.61e-14!9;UBERON:0000483!4.16e-12!309;UBERON:0007023!4.23e-12!115;UBERON:0002465!7.98e-12!10;UBERON:0000119!9.07e-12!312;UBERON:0001473!5.13e-10!8;UBERON:0004536!5.13e-10!8;UBERON:0006558!5.13e-10!8;UBERON:0000467!7.70e-10!625;UBERON:0000480!9.12e-10!626;UBERON:0001637!1.43e-08!42;UBERON:0003509!1.43e-08!42;UBERON:0004572!1.43e-08!42;UBERON:0000468!1.87e-08!659;UBERON:0001638!8.42e-08!9;UBERON:0003920!8.42e-08!9;UBERON:0004582!8.42e-08!9;UBERON:0002298!1.45e-07!8;UBERON:0000490!1.95e-07!138;UBERON:0003103!3.97e-07!69;UBERON:0004573!4.29e-07!33;UBERON:0004571!4.29e-07!33;UBERON:0000948!6.58e-07!24;UBERON:0005498!6.58e-07!24;UBERON:0004140!6.58e-07!24;UBERON:0009881!6.58e-07!24;UBERON:0004141!6.58e-07!24;UBERON:0003084!6.58e-07!24;UBERON:0007005!6.58e-07!24;UBERON:0004139!6.58e-07!24;UBERON:0004291!6.58e-07!24;UBERON:0007100!9.96e-07!27 | |ontology_enrichment_uberon=UBERON:0001986!5.14e-27!18;UBERON:0004638!5.14e-27!18;UBERON:0004852!5.14e-27!18;UBERON:0000055!8.79e-26!69;UBERON:0004111!8.38e-23!241;UBERON:0000487!7.04e-21!22;UBERON:0002049!9.86e-21!79;UBERON:0007798!9.86e-21!79;UBERON:0000477!1.27e-20!286;UBERON:0004872!8.95e-20!84;UBERON:0004535!1.86e-19!110;UBERON:0001009!1.97e-19!113;UBERON:0001981!3.05e-19!60;UBERON:0007500!3.05e-19!60;UBERON:0004537!3.05e-19!60;UBERON:0006965!3.05e-19!60;UBERON:0006914!1.37e-17!25;UBERON:0000025!2.96e-16!194;UBERON:0003914!1.80e-14!118;UBERON:0003915!2.61e-14!9;UBERON:0004700!2.61e-14!9;UBERON:0001917!2.61e-14!9;UBERON:0000483!4.16e-12!309;UBERON:0007023!4.23e-12!115;UBERON:0002465!7.98e-12!10;UBERON:0000119!9.07e-12!312;UBERON:0001473!5.13e-10!8;UBERON:0004536!5.13e-10!8;UBERON:0006558!5.13e-10!8;UBERON:0000467!7.70e-10!625;UBERON:0000480!9.12e-10!626;UBERON:0001637!1.43e-08!42;UBERON:0003509!1.43e-08!42;UBERON:0004572!1.43e-08!42;UBERON:0000468!1.87e-08!659;UBERON:0001638!8.42e-08!9;UBERON:0003920!8.42e-08!9;UBERON:0004582!8.42e-08!9;UBERON:0002298!1.45e-07!8;UBERON:0000490!1.95e-07!138;UBERON:0003103!3.97e-07!69;UBERON:0004573!4.29e-07!33;UBERON:0004571!4.29e-07!33;UBERON:0000948!6.58e-07!24;UBERON:0005498!6.58e-07!24;UBERON:0004140!6.58e-07!24;UBERON:0009881!6.58e-07!24;UBERON:0004141!6.58e-07!24;UBERON:0003084!6.58e-07!24;UBERON:0007005!6.58e-07!24;UBERON:0004139!6.58e-07!24;UBERON:0004291!6.58e-07!24;UBERON:0007100!9.96e-07!27 | ||
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|short_description=p@chr9:13432977..13433050,- | |short_description=p@chr9:13432977..13433050,- | ||
}} | }} |
Latest revision as of 23:41, 31 July 2015
Short description: | p@chr9:13432977..13433050, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:13432977..13433050, - |
Coexpression cluster: | C1506_Endothelial_Lymphatic_Hepatic_Renal_breast_heart_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.90e-80 | 24 |
endothelial cell | 2.46e-75 | 36 |
blood vessel endothelial cell | 3.09e-59 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.09e-59 | 18 |
meso-epithelial cell | 1.19e-58 | 45 |
lining cell | 1.07e-43 | 58 |
barrier cell | 1.07e-43 | 58 |
endothelial cell of artery | 2.43e-30 | 9 |
mesodermal cell | 2.19e-24 | 121 |
lymphangioblast | 8.82e-22 | 6 |
endothelial cell of lymphatic vessel | 8.82e-22 | 6 |
vascular lymphangioblast | 8.82e-22 | 6 |
squamous epithelial cell | 1.20e-20 | 63 |
aortic endothelial cell | 1.23e-20 | 6 |
vein endothelial cell | 3.16e-20 | 6 |
embryonic cell | 1.07e-12 | 250 |
capillary endothelial cell | 7.35e-12 | 3 |
glomerular endothelial cell | 6.40e-11 | 5 |
endothelial cell of umbilical vein | 7.57e-11 | 3 |
acinar cell | 1.50e-10 | 5 |
epithelial cell | 2.28e-09 | 253 |
protein secreting cell | 8.43e-09 | 6 |
thoracic aorta endothelial cell | 4.46e-08 | 2 |
glomerular cell | 8.35e-08 | 7 |
kidney corpuscule cell | 8.35e-08 | 7 |
sebum secreting cell | 2.54e-07 | 2 |
epithelial cell of sweat gland | 2.54e-07 | 2 |
epithelial cell of skin gland | 2.54e-07 | 2 |
acinar cell of sebaceous gland | 2.54e-07 | 2 |