FFCP PHASE1:Hg19::chr9:15980752..15980757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:15980752..15980757,+ | |||
|coexpression_cluster_id=C790 | |coexpression_cluster_id=C790 | ||
|description=CAGE_peak_at_chr9:15980752..15980757,+ | |description=CAGE_peak_at_chr9:15980752..15980757,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.06e-12;2 | |ontology_enrichment_celltype_v019=CL:0000047;3.06e-12;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.59e-23;1!UBERON:0003056;1.35e-08;3 | |ontology_enrichment_development_v019=UBERON:0005425;4.59e-23;1!UBERON:0003056;1.35e-08;3 | ||
|ontology_enrichment_disease=DOID:171!5.63e-14!10;DOID:3095!9.43e-07!22;DOID:2994!9.43e-07!22 | |ontology_enrichment_disease=DOID:171!5.63e-14!10;DOID:3095!9.43e-07!22;DOID:2994!9.43e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;5.69e-55;10!DOID:3095;3.21e-25;22!DOID:2994;3.21e-25;22!DOID:3193;3.06e-12;2!DOID:962;3.06e-12;2!DOID:1192;1.35e-08;3 | |ontology_enrichment_disease_v019=DOID:171;5.69e-55;10!DOID:3095;3.21e-25;22!DOID:2994;3.21e-25;22!DOID:3193;3.06e-12;2!DOID:962;3.06e-12;2!DOID:1192;1.35e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:171,7.95e-55,10;DOID:3095,3.74e-25,22;DOID:2994,3.74e-25,22;DOID:3193,3.62e-12,2;DOID:962,3.62e-12,2;DOID:1192,1.51e-08,3 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.98e-44,2;UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0000010,1.12e-10,8;UBERON:0001781,8.61e-07,4 | |||
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| ||
|short_description=p@chr9:15980752..15980757,+ | |short_description=p@chr9:15980752..15980757,+ | ||
}} | }} |
Latest revision as of 00:54, 1 August 2015
Short description: | p@chr9:15980752..15980757, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:15980752..15980757, + |
Coexpression cluster: | C790_neuroectodermal_carcinoid_neuroblastoma_neuroepithelioma_acute_peripheral_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.98e-44 | 2 |
cranial nerve II | 3.28e-23 | 1 |
cranial nerve | 3.28e-23 | 1 |
nerve trunk | 3.28e-23 | 1 |
nerve connecting eye with brain | 3.28e-23 | 1 |
nerve | 3.28e-23 | 1 |
retinal neural layer | 3.28e-23 | 1 |
presumptive neural retina | 3.28e-23 | 1 |
multi cell component structure | 2.59e-12 | 2 |
neuron projection bundle | 2.59e-12 | 2 |
peripheral nervous system | 1.12e-10 | 8 |
layer of retina | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.95e-55 | 10 |
germ cell and embryonal cancer | 3.74e-25 | 22 |
germ cell cancer | 3.74e-25 | 22 |
peripheral nerve sheath neoplasm | 3.62e-12 | 2 |
neurofibroma | 3.62e-12 | 2 |
peripheral nervous system neoplasm | 1.51e-08 | 3 |