FFCP PHASE1:Hg19::chr9:21591797..21591817,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:21591797..21591817,- to FFCP PHASE1:Hg19::chr9:21591797..21591817,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:21591797..21591817,- | |||
|coexpression_cluster_id=C4813 | |||
|description=CAGE_peak_at_chr9:21591797..21591817,- | |||
|id=chr9:21591797..21591817,- | |||
|ontology_enrichment_celltype=CL:0000066!1.49e-13!254;CL:0002368!5.88e-11!13;CL:0002076!4.98e-09!43;CL:0000548!7.62e-09!679;CL:0000004!7.62e-09!679;CL:0000255!7.62e-09!679;CL:0000012!1.36e-08!682;CL:0002202!1.91e-07!9;CL:0002632!1.91e-07!9;CL:0000220!4.68e-07!246;CL:0000082!6.26e-07!19;CL:0000003!6.35e-07!722;CL:0002321!7.47e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.65e-12;4!CL:0000731;1.65e-12;4!CL:0002231;4.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.30e-13,4;CL:0000731,7.30e-13,4;CL:0002231,7.39e-08,3;CL:0002076,8.59e-07,42;CL:0002368,9.44e-07,13;CL:1001319,9.67e-07,1;CL:1000600,9.67e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.04e-08;3!UBERON:0003353;9.04e-08;3 | |||
|ontology_enrichment_disease=DOID:305!4.45e-07!106;DOID:1749!9.85e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!1.34e-07!6;UBERON:0000365!2.21e-07!5;UBERON:0004802!6.26e-07!19;UBERON:0000115!6.26e-07!19;UBERON:0005153!7.90e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.00e-17;5!UBERON:0005910;3.25e-14;6!UBERON:0002367;9.26e-08;11!UBERON:0010147;9.26e-08;11!UBERON:0000486;3.78e-07;12!UBERON:0003937;4.07e-07;12!UBERON:0005399;4.07e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.22e-17,5;UBERON:0005910,1.01e-14,6;UBERON:0000162,5.12e-09,14;UBERON:0001353,5.12e-09,14;UBERON:0000163,5.12e-09,14;UBERON:0006866,5.12e-09,14;UBERON:0000164,5.12e-09,14;UBERON:0000931,5.12e-09,14;UBERON:0005156,2.05e-08,59;UBERON:0000990,2.05e-08,59;UBERON:0004122,2.13e-08,15;UBERON:0002367,1.42e-07,11;UBERON:0010147,1.42e-07,11;UBERON:0009846,1.42e-07,11;UBERON:0003353,1.42e-07,11;UBERON:0004902,1.42e-07,11;UBERON:0003820,1.42e-07,11;UBERON:0009847,1.42e-07,11;UBERON:0003937,5.98e-07,12;UBERON:0005399,5.98e-07,12;UBERON:0005911,8.19e-07,82;UBERON:0004645,9.67e-07,1;UBERON:0001256,9.67e-07,1;UBERON:0001259,9.67e-07,1 | |||
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| ||
|short_description=p@chr9:21591797..21591817,- | |||
}} | }} |
Latest revision as of 01:08, 1 August 2015
Short description: | p@chr9:21591797..21591817, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:21591797..21591817, - |
Coexpression cluster: | C4813_Urothelial_Bronchial_Small_Prostate_Fibroblast_tubular_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.30e-13 | 4 |
urothelial cell | 7.30e-13 | 4 |
epithelial cell of prostate | 7.39e-08 | 3 |
endo-epithelial cell | 8.59e-07 | 42 |
respiratory epithelial cell | 9.44e-07 | 13 |
bladder cell | 9.67e-07 | 1 |
lower urinary tract cell | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.22e-17 | 5 |
transitional epithelium | 1.01e-14 | 6 |
cloaca | 5.12e-09 | 14 |
anal region | 5.12e-09 | 14 |
embryonic cloaca | 5.12e-09 | 14 |
terminal part of digestive tract | 5.12e-09 | 14 |
primitive urogenital sinus | 5.12e-09 | 14 |
proctodeum | 5.12e-09 | 14 |
reproductive structure | 2.05e-08 | 59 |
reproductive system | 2.05e-08 | 59 |
genitourinary system | 2.13e-08 | 15 |
prostate gland | 1.42e-07 | 11 |
male accessory sex gland | 1.42e-07 | 11 |
embryonic cloacal epithelium | 1.42e-07 | 11 |
epithelium of hindgut | 1.42e-07 | 11 |
urogenital sinus epithelium | 1.42e-07 | 11 |
prostate bud | 1.42e-07 | 11 |
prostate field | 1.42e-07 | 11 |
sex gland | 5.98e-07 | 12 |
male reproductive gland | 5.98e-07 | 12 |
endo-epithelium | 8.19e-07 | 82 |
urinary bladder urothelium | 9.67e-07 | 1 |
wall of urinary bladder | 9.67e-07 | 1 |
mucosa of urinary bladder | 9.67e-07 | 1 |