Personal tools

FFCP PHASE1:Hg19::chrX:26933473..26933478,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chrX:26933473..26933478,+
|coexpression_cluster_id=C1203
|description=CAGE_peak_at_chrX:26933473..26933478,+
|description=CAGE_peak_at_chrX:26933473..26933478,+
|id=chrX:26933473..26933478,+
|id=chrX:26933473..26933478,+
|ontology_enrichment_celltype=CL:0000071!8.11e-84!18;CL:0002546!8.11e-84!18;CL:0002139!2.18e-62!24;CL:0000115!3.66e-42!35;CL:0002078!1.79e-38!44;CL:0002543!1.27e-37!6;CL:0002144!2.26e-28!3;CL:1000413!8.90e-26!9;CL:0002544!2.93e-25!6;CL:0000213!4.23e-25!57;CL:0000215!4.23e-25!57;CL:0000076!6.59e-23!62;CL:0000222!1.88e-19!119;CL:0002618!8.35e-13!3;CL:0000220!7.41e-08!246;CL:0002321!9.04e-08!248
|ontology_enrichment_celltype=CL:0000071!8.11e-84!18;CL:0002546!8.11e-84!18;CL:0002139!2.18e-62!24;CL:0000115!3.66e-42!35;CL:0002078!1.79e-38!44;CL:0002543!1.27e-37!6;CL:0002144!2.26e-28!3;CL:1000413!8.90e-26!9;CL:0002544!2.93e-25!6;CL:0000213!4.23e-25!57;CL:0000215!4.23e-25!57;CL:0000076!6.59e-23!62;CL:0000222!1.88e-19!119;CL:0002618!8.35e-13!3;CL:0000220!7.41e-08!246;CL:0002321!9.04e-08!248
|ontology_enrichment_celltype_v019=CL:0002544;6.91e-50;6!CL:0000071;6.64e-46;18!CL:0002139;1.29e-34;24!CL:1000413;1.31e-33;9!CL:0002078;1.12e-16;45!CL:0000115;2.41e-16;36!CL:0000213;2.07e-12;58!CL:0000215;2.07e-12;58!CL:0002144;2.31e-12;3!CL:0000515;2.31e-12;3!CL:0000056;1.32e-09;4!CL:0000076;2.33e-07;63!CL:0002543;9.23e-07;6
|ontology_enrichment_celltype_v019_2=CL:0002544,6.35e-50,6;CL:0000071,6.05e-46,18;CL:0002546,6.05e-46,18;CL:0002139,1.20e-34,24;CL:1000413,1.24e-33,9;CL:0000115,2.54e-23,36;CL:0002078,8.89e-19,45;CL:0000213,1.09e-14,58;CL:0000215,1.09e-14,58;CL:0000076,1.45e-13,63;CL:0002144,2.31e-12,3;CL:0000222,3.06e-10,121;CL:0000515,1.44e-09,4;CL:0002543,8.97e-07,6
|ontology_enrichment_development_v019=CL:0002546;6.64e-46;18!CL:0000515;1.32e-09;4
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001986!8.11e-84!18;UBERON:0004638!8.11e-84!18;UBERON:0004852!8.11e-84!18;UBERON:0000487!3.10e-68!22;UBERON:0006914!8.14e-60!25;UBERON:0001915!2.26e-28!3;UBERON:0001982!2.26e-28!3;UBERON:0001981!1.30e-27!60;UBERON:0007500!1.30e-27!60;UBERON:0004537!1.30e-27!60;UBERON:0006965!1.30e-27!60;UBERON:0003915!8.90e-26!9;UBERON:0004700!8.90e-26!9;UBERON:0001917!8.90e-26!9;UBERON:0001638!4.28e-25!9;UBERON:0003920!4.28e-25!9;UBERON:0004582!4.28e-25!9;UBERON:0000055!1.02e-23!69;UBERON:0002049!2.00e-20!79;UBERON:0007798!2.00e-20!79;UBERON:0004872!4.51e-19!84;UBERON:0003914!3.19e-17!118;UBERON:0000490!2.13e-16!138;UBERON:0004535!5.14e-14!110;UBERON:0001009!1.40e-13!113;UBERON:0000025!2.32e-09!194;UBERON:0003081!3.91e-08!216;UBERON:0002066!4.86e-08!5;UBERON:0000483!1.28e-07!309;UBERON:0000119!1.63e-07!312;UBERON:0001637!1.74e-07!42;UBERON:0003509!1.74e-07!42;UBERON:0004572!1.74e-07!42;UBERON:0000947!2.39e-07!21;UBERON:0010191!2.39e-07!21;UBERON:0004111!5.21e-07!241;UBERON:0004573!6.73e-07!33;UBERON:0004571!6.73e-07!33
|ontology_enrichment_uberon_v019=UBERON:0004638;6.64e-46;18!UBERON:0001986;6.64e-46;18!UBERON:0004852;6.64e-46;18!UBERON:0000487;1.07e-37;22!UBERON:0003915;1.31e-33;9!UBERON:0004700;1.31e-33;9!UBERON:0001917;1.31e-33;9!UBERON:0006914;2.93e-33;25!UBERON:0000490;6.83e-26;33!UBERON:0000947;6.38e-15;21!UBERON:0010191;6.38e-15;21!UBERON:0010523;2.31e-12;3!UBERON:0001915;2.31e-12;3!UBERON:0001982;2.31e-12;3!UBERON:0007500;2.48e-11;56!UBERON:0001981;2.48e-11;56!UBERON:0004537;2.48e-11;56!UBERON:0004573;3.78e-10;33!UBERON:0004571;3.78e-10;33!UBERON:0001637;4.34e-09;42!UBERON:0003509;4.34e-09;42!UBERON:0004572;4.34e-09;42!UBERON:0000055;1.34e-07;65
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.05e-46,18;UBERON:0001986,6.05e-46,18;UBERON:0004852,6.05e-46,18;UBERON:0000487,9.92e-38,22;UBERON:0003915,1.24e-33,9;UBERON:0004700,1.24e-33,9;UBERON:0001917,1.24e-33,9;UBERON:0006914,2.74e-33,25;UBERON:0000947,6.23e-15,21;UBERON:0010191,6.23e-15,21;UBERON:0007500,1.89e-14,59;UBERON:0001981,1.89e-14,59;UBERON:0004537,1.89e-14,59;UBERON:0006965,1.89e-14,59;UBERON:0000055,1.33e-12,68;UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0002049,4.79e-11,78;UBERON:0007798,4.79e-11,78;UBERON:0004872,2.09e-10,83;UBERON:0004573,8.77e-10,33;UBERON:0004571,8.77e-10,33;UBERON:0000490,1.95e-08,148;UBERON:0004535,5.11e-08,109;UBERON:0001637,7.76e-08,42;UBERON:0003509,7.76e-08,42;UBERON:0004572,7.76e-08,42;UBERON:0001009,8.20e-08,112;UBERON:0003914,1.71e-07,117
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57153536943422,0.860234595106124,2.42998351125316,1.13061588384802,0,0,0.417989933073621,0,0,0,0.805658634218294,2.28081631715554,0.732186172644509,0,0,0.357198913136319,0,0.112611480483322,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02693829334611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57153536943422,0.860234595106124,2.42998351125316,1.13061588384802,0,0,0.417989933073621,0,0,0,0.805658634218294,2.28081631715554,0.732186172644509,0,0,0.357198913136319,0,0.112611480483322,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02693829334611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chrX:26933473..26933478,+
|short_description=p@chrX:26933473..26933478,+
}}
}}

Latest revision as of 07:40, 1 August 2015

Short description:p@chrX:26933473..26933478, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chrX:26933473..26933478, +
Coexpression cluster:C1203_Endothelial_placenta_choriocarcinoma_Renal_Hair_Fibroblast_Myoblast
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chrX:26933473..26933478,%2B&oldid=3689517"