FFCP PHASE1:Hg19::chrX:45630665..45630670,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:45630665..45630670,- | |||
|coexpression_cluster_id=C1616 | |||
|description=CAGE_peak_at_chrX:45630665..45630670,- | |description=CAGE_peak_at_chrX:45630665..45630670,- | ||
|id=chrX:45630665..45630670,- | |id=chrX:45630665..45630670,- | ||
|ontology_enrichment_celltype=CL:0000055!2.47e-18!180;CL:0000057!4.45e-18!75;CL:0002620!2.59e-16!23;CL:0002371!1.11e-12!591;CL:0000144!1.24e-11!625;CL:0000548!4.73e-11!679;CL:0000004!4.73e-11!679;CL:0000255!4.73e-11!679;CL:0000012!1.09e-10!682;CL:0000723!1.28e-08!436;CL:0000048!4.94e-08!430;CL:0000003!5.63e-08!722;CL:0000034!9.56e-08!444;CL:0000220!2.16e-07!246;CL:0000680!2.91e-07!57;CL:0000056!2.91e-07!57;CL:0000355!2.91e-07!57;CL:0000222!3.48e-07!119;CL:0002321!3.87e-07!248 | |ontology_enrichment_celltype=CL:0000055!2.47e-18!180;CL:0000057!4.45e-18!75;CL:0002620!2.59e-16!23;CL:0002371!1.11e-12!591;CL:0000144!1.24e-11!625;CL:0000548!4.73e-11!679;CL:0000004!4.73e-11!679;CL:0000255!4.73e-11!679;CL:0000012!1.09e-10!682;CL:0000723!1.28e-08!436;CL:0000048!4.94e-08!430;CL:0000003!5.63e-08!722;CL:0000034!9.56e-08!444;CL:0000220!2.16e-07!246;CL:0000680!2.91e-07!57;CL:0000056!2.91e-07!57;CL:0000355!2.91e-07!57;CL:0000222!3.48e-07!119;CL:0002321!3.87e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.32e-18;23!CL:0002551;4.66e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.26e-18,23;CL:0000057,2.75e-13,76;CL:0000723,2.55e-07,433;CL:0002551,2.90e-07,6;CL:0000034,4.90e-07,441;CL:0000048,7.06e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.44e-09;5!DOID:450;5.44e-09;5!DOID:66;5.44e-09;5!DOID:423;5.44e-09;5!DOID:0080000;5.44e-09;5!DOID:11722;5.44e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.03e-09,5;DOID:450,4.03e-09,5;DOID:66,4.03e-09,5;DOID:423,4.03e-09,5;DOID:0080000,4.03e-09,5;DOID:11722,4.03e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.99e-11!95;UBERON:0000914!2.56e-10!83;UBERON:0002329!2.56e-10!83;UBERON:0003077!2.56e-10!83;UBERON:0003059!2.56e-10!83;UBERON:0007282!2.56e-10!83;UBERON:0009618!2.56e-10!83;UBERON:0007285!2.56e-10!83;UBERON:0002097!3.41e-10!40;UBERON:0002199!1.77e-09!45;UBERON:0002416!1.77e-09!45;UBERON:0000486!2.53e-09!82;UBERON:0004290!7.07e-09!70;UBERON:0000467!3.22e-08!625;UBERON:0000480!4.10e-08!626;UBERON:0000468!5.96e-07!659 | |ontology_enrichment_uberon=UBERON:0003102!4.99e-11!95;UBERON:0000914!2.56e-10!83;UBERON:0002329!2.56e-10!83;UBERON:0003077!2.56e-10!83;UBERON:0003059!2.56e-10!83;UBERON:0007282!2.56e-10!83;UBERON:0009618!2.56e-10!83;UBERON:0007285!2.56e-10!83;UBERON:0002097!3.41e-10!40;UBERON:0002199!1.77e-09!45;UBERON:0002416!1.77e-09!45;UBERON:0000486!2.53e-09!82;UBERON:0004290!7.07e-09!70;UBERON:0000467!3.22e-08!625;UBERON:0000480!4.10e-08!626;UBERON:0000468!5.96e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.49e-10;41!UBERON:0002199;3.85e-09;46!UBERON:0002416;3.85e-09;46!UBERON:0002067;4.20e-08;9!UBERON:0003102;1.26e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.05e-13,41;UBERON:0002199,6.20e-12,46;UBERON:0002416,6.20e-12,46;UBERON:0002067,2.81e-08,9;UBERON:0004016,2.81e-08,9;UBERON:0010083,2.81e-08,9;UBERON:0003102,5.82e-07,99 | |||
|phase1_expression=0.726713517082227,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0,0,0,0.612002073732759,0.626909442956176,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,1.27867425159808,0,0,0,0.580418477257168,0,0.622822248995575,0.75374599577023,1.0429658368404,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.724232594804119,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0,0.735326160691737,0,0.535798369704479,0,0.675668882899933,0,0,0.549605231791222,0,0,0.436094052142534,0,0.25326102332916,3.97227542439656,0,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0.936480230490962,0.570471821544449,0.597794722207204,1.40921398372518,1.13311061057692,1.96631129383148,1.02077085627447,0.61417158655884,0.103325781175765,0,0,0,1.43723628363248,0.673344455816265,0.125118519871964,0.831192346452549,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,5.91985797773244,1.49490172172997,0.423863802319124,4.20127534518163,0.824420233907511,3.09168648054755,0.18611685633159,2.53164498361899,0.389748020644795,3.28163906517349,0.644349290496095,0.323292113637624,4.26011511019937,0.906768884048762,0.508681776931463,0.386521706326594,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,4.14404764057442,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.402115889646523,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.671928512795438,0.567100388969546,0.0895585227028483,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.387815147273333,0,0.845302752556,0.531876233169741,1.04007436911366,0.514414748524284,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,1.10621501125022,1.73767228936166,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.154209693802656,0.532685175939381,0.492762936082855,0,0.697262270759755,0.120859449591622,0.200506470303285,0,0.34444334449382,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0,0,1.02056223165909,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.462145851343933,0.460511024178389,1.10269257987624,0.214840489736547,0.435050081742686,0.852266274161009,0.356128142586949,0,0.192190067365106,2.29702882490251,0,0,0.94443704049192,0,0,0,0,0,0.715624433709956,0.744316738719335,0,0,1.27948895655667,0,0.95460974377781,0.78494864019923,0.359744915166629,0.54907405947211,0,0.202182481573316,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.272999822815972,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0.35667105148125,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0.627865836814451,0,0,0,0,0.293977192243133,0.174118413160805,0.17472666824203,0.687944129886466,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0.126621591911757,0,0,0,0,0,0,0,1.1524383839052,0.621262677827163,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0.316801009558219,0,0,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0.164185041498678,1.87426823963964,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,1.34329322598187,0.467426619694449,1.66441758450784,0.568209015825267,1.0062716070103,0.889811221596536,0.228840068396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| ||
|short_description=p@chrX:45630665..45630670,- | |short_description=p@chrX:45630665..45630670,- | ||
}} | }} |
Latest revision as of 08:13, 1 August 2015
Short description: | p@chrX:45630665..45630670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:45630665..45630670, - |
Coexpression cluster: | C1616_Fibroblast_Small_large_Smooth_liposarcoma_Myoblast_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.26e-18 | 23 |
fibroblast | 2.75e-13 | 76 |
somatic stem cell | 2.55e-07 | 433 |
fibroblast of dermis | 2.90e-07 | 6 |
stem cell | 4.90e-07 | 441 |
multi fate stem cell | 7.06e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.05e-13 | 41 |
integument | 6.20e-12 | 46 |
integumental system | 6.20e-12 | 46 |
dermis | 2.81e-08 | 9 |
dermatome | 2.81e-08 | 9 |
future dermis | 2.81e-08 | 9 |
surface structure | 5.82e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.03e-09 | 5 |
myotonic disease | 4.03e-09 | 5 |
muscle tissue disease | 4.03e-09 | 5 |
myopathy | 4.03e-09 | 5 |
muscular disease | 4.03e-09 | 5 |
myotonic dystrophy | 4.03e-09 | 5 |