FFCP PHASE1:Hg19::chrY:7671750..7671771,-: Difference between revisions
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|id=chrY:7671750..7671771,-
|short_description=p@chrY:7671750..7671771,-
|description=CAGE_peak_at_chrY:7671750..7671771,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrY:7671750..7671771,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chrY:7671750..7671771,- | |||
|id=chrY:7671750..7671771,- | |||
|ontology_enrichment_celltype=CL:0000317!4.73e-37!2;CL:1000448!4.73e-37!2;CL:0002308!4.73e-37!2;CL:0002140!4.73e-37!2;CL:0002159!1.20e-22!13;CL:0000362!3.92e-21!8;CL:0002077!1.58e-19!33;CL:0000622!1.75e-15!5;CL:0002368!4.28e-13!13;CL:0000154!4.52e-13!6;CL:0000197!7.33e-13!6;CL:0000098!7.33e-13!6;CL:0002167!7.33e-13!6;CL:0002076!1.34e-10!43;CL:0002252!2.07e-10!2;CL:0000575!2.72e-10!2;CL:0000150!5.00e-09!9;CL:0000221!9.26e-09!71;CL:0000220!4.13e-08!246;CL:0002321!4.87e-08!248;CL:0000066!6.71e-08!254;CL:0000223!9.82e-08!59;CL:0000076!2.11e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000317;7.14e-26;2!CL:1000448;7.14e-26;2!CL:0002308;7.14e-26;2!CL:0002140;7.14e-26;2!CL:0000362;5.13e-23;9!CL:0002159;3.17e-15;14!CL:0000312;2.66e-11;5!CL:0000622;3.26e-11;5!CL:0000240;1.22e-09;6!CL:0000311;1.22e-09;6!CL:0000079;1.22e-09;6!CL:0000237;1.22e-09;6!CL:0000154;1.44e-09;6!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.18e-26,2;CL:1000448,9.18e-26,2;CL:0002308,9.18e-26,2;CL:0002140,9.18e-26,2;CL:0000362,5.74e-23,9;CL:0002159,3.41e-15,14;CL:0000312,2.66e-11,5;CL:0000622,3.60e-11,5;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6;CL:0000154,1.57e-09,6;CL:0000076,5.86e-08,63;CL:0002077,7.16e-07,34;CL:0000150,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.22e-09;6!CL:0000114;1.22e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!4.73e-37!2;UBERON:0007771!4.73e-37!2;UBERON:0003297!4.73e-37!2;UBERON:0001821!4.73e-37!2;UBERON:0003487!4.73e-37!2;UBERON:0001820!4.73e-37!2;UBERON:0005089!4.73e-37!2;UBERON:0005088!4.73e-37!2;UBERON:0001003!2.26e-12!14;UBERON:0007376!2.26e-12!14;UBERON:0007383!2.26e-12!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.14e-26;2!UBERON:0007771;7.14e-26;2!UBERON:0003297;7.14e-26;2!UBERON:0001821;7.14e-26;2!UBERON:0003487;7.14e-26;2!UBERON:0001820;7.14e-26;2!UBERON:0001003;2.75e-14;15!UBERON:0007376;2.75e-14;15!UBERON:0003343;1.13e-13;4!UBERON:0004785;1.13e-13;4!UBERON:0000974;1.44e-09;6!UBERON:0010371;1.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,9.18e-26,2;UBERON:0007771,9.18e-26,2;UBERON:0003297,9.18e-26,2;UBERON:0001821,9.18e-26,2;UBERON:0003487,9.18e-26,2;UBERON:0001820,9.18e-26,2;UBERON:0005089,9.18e-26,2;UBERON:0005088,9.18e-26,2;UBERON:0001003,2.94e-14,15;UBERON:0007376,2.94e-14,15;UBERON:0007383,2.94e-14,15;UBERON:0003343,1.13e-13,4;UBERON:0004785,1.13e-13,4 | |||
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|short_description=p@chrY:7671750..7671771,- | |||
}} | }} |
Latest revision as of 10:06, 1 August 2015
Short description: | p@chrY:7671750..7671771, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrY:7671750..7671771, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.18e-26 | 2 |
epithelial cell of sweat gland | 9.18e-26 | 2 |
epithelial cell of skin gland | 9.18e-26 | 2 |
acinar cell of sebaceous gland | 9.18e-26 | 2 |
epidermal cell | 5.74e-23 | 9 |
general ecto-epithelial cell | 3.41e-15 | 14 |
keratinocyte | 2.66e-11 | 5 |
acinar cell | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
protein secreting cell | 1.57e-09 | 6 |
squamous epithelial cell | 5.86e-08 | 63 |
ecto-epithelial cell | 7.16e-07 | 34 |
glandular epithelial cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 9.18e-26 | 2 |
epidermis gland | 9.18e-26 | 2 |
gland of integumental system | 9.18e-26 | 2 |
sebaceous gland | 9.18e-26 | 2 |
skin sebaceous gland | 9.18e-26 | 2 |
sweat gland | 9.18e-26 | 2 |
sweat gland placode | 9.18e-26 | 2 |
sebaceous gland placode | 9.18e-26 | 2 |
skin epidermis | 2.94e-14 | 15 |
outer epithelium | 2.94e-14 | 15 |
enveloping layer of ectoderm | 2.94e-14 | 15 |
mucosa of oral region | 1.13e-13 | 4 |
respiratory system mucosa | 1.13e-13 | 4 |