FFCP PHASE1:Mm9::chr10:10408741..10408754,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:10408741..10408754,-
|short_description=p@chr10:10408741..10408754,-
|description=CAGE_peak_at_chr10:10408741..10408754,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=751 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:10408741..10408754,- | |||
|description=CAGE_peak_at_chr10:10408741..10408754,- | |||
|id=chr10:10408741..10408754,- | |||
|ontology_enrichment_celltype=CL:0000117!3.31e-13!23;CL:0000337!3.31e-13!23;CL:0002610!3.76e-09!3;CL:0000540!2.05e-08!33;CL:0000047!2.05e-08!33;CL:0000031!2.05e-08!33;CL:0000404!2.05e-08!33;CL:0002614!2.69e-08!3;CL:0000393!9.78e-07!39;CL:0000211!9.78e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.35e-53,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002614,4.17e-07,3;CL:0000120,5.46e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.02e-25!50;UBERON:0006238!2.02e-25!50;UBERON:0002616!9.95e-24!49;UBERON:0000033!1.37e-22!63;UBERON:0001017!1.80e-22!73;UBERON:0005743!1.80e-22!73;UBERON:0000073!1.07e-21!75;UBERON:0001016!1.07e-21!75;UBERON:0001049!1.58e-21!52;UBERON:0005068!1.58e-21!52;UBERON:0006241!1.58e-21!52;UBERON:0007135!1.58e-21!52;UBERON:0002346!3.05e-17!71;UBERON:0003075!3.05e-17!71;UBERON:0007284!3.05e-17!71;UBERON:0004121!8.30e-17!102;UBERON:0000924!8.30e-17!102;UBERON:0006601!8.30e-17!102;UBERON:0007811!6.89e-15!86;UBERON:0002020!1.33e-14!34;UBERON:0002298!4.50e-14!6;UBERON:0003080!8.67e-14!40;UBERON:0003056!1.64e-13!49;UBERON:0002791!2.93e-13!29;UBERON:0003528!2.93e-13!29;UBERON:0001893!2.93e-13!29;UBERON:0000153!4.28e-13!94;UBERON:0002780!1.99e-12!39;UBERON:0001890!1.99e-12!39;UBERON:0006240!1.99e-12!39;UBERON:0002420!1.88e-10!8;UBERON:0007245!1.88e-10!8;UBERON:0010009!1.88e-10!8;UBERON:0010011!1.88e-10!8;UBERON:0000454!1.88e-10!8;UBERON:0002950!2.14e-10!4;UBERON:0001891!2.14e-10!4;UBERON:0009616!2.14e-10!4;UBERON:0004684!3.76e-09!3;UBERON:0002275!3.76e-09!3;UBERON:0003076!7.24e-09!12;UBERON:0003057!7.24e-09!12;UBERON:0002038!2.69e-08!3;UBERON:0002308!2.69e-08!3;UBERON:0009663!2.69e-08!3;UBERON:0009661!2.69e-08!3;UBERON:0006331!2.69e-08!3;UBERON:0000125!2.69e-08!3;UBERON:0000025!1.31e-07!114;UBERON:0004111!9.45e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.35e-53,3;UBERON:0002275,7.35e-53,3;UBERON:0002038,4.17e-07,3;UBERON:0009663,4.17e-07,3;UBERON:0009661,4.17e-07,3;UBERON:0000125,4.17e-07,3;UBERON:0002308,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,2.93680877595932,3.22573719838111,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.30559649555362,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,2.93680877595932,3.22573719838111,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.30559649555362,0.589257170947335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr10:10408741..10408754,- | |||
}} | }} |
Latest revision as of 19:44, 3 August 2015
Short description: | p@chr10:10408741..10408754, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:10408741..10408754, - |
Coexpression cluster: | MCL_coexpression_mm9:751 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.35e-53 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
neuron of the substantia nigra | 4.17e-07 | 3 |
granule cell | 5.46e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 7.35e-53 | 3 |
reticular formation | 7.35e-53 | 3 |
substantia nigra | 4.17e-07 | 3 |
telencephalic nucleus | 4.17e-07 | 3 |
midbrain nucleus | 4.17e-07 | 3 |
neural nucleus | 4.17e-07 | 3 |
nucleus of brain | 4.17e-07 | 3 |