FFCP PHASE1:Mm9::chr10:108236915..108236920,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:108236915..108236920,- | |||
|description=CAGE_peak_at_chr10:108236915..108236920,- | |description=CAGE_peak_at_chr10:108236915..108236920,- | ||
|id=chr10:108236915..108236920,- | |id=chr10:108236915..108236920,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.59e-18!10;UBERON:0000411!2.59e-18!10;UBERON:0001950!2.59e-18!10;UBERON:0002346!1.63e-17!71;UBERON:0003075!1.63e-17!71;UBERON:0007284!1.63e-17!71;UBERON:0004121!1.11e-16!102;UBERON:0000924!1.11e-16!102;UBERON:0006601!1.11e-16!102;UBERON:0000033!1.30e-16!63;UBERON:0001017!9.75e-16!73;UBERON:0005743!9.75e-16!73;UBERON:0000073!4.43e-15!75;UBERON:0001016!4.43e-15!75;UBERON:0000955!7.12e-15!50;UBERON:0006238!7.12e-15!50;UBERON:0003056!5.53e-14!49;UBERON:0002616!6.84e-14!49;UBERON:0002020!1.25e-13!34;UBERON:0002791!1.96e-13!29;UBERON:0003528!1.96e-13!29;UBERON:0001893!1.96e-13!29;UBERON:0000956!3.86e-12!21;UBERON:0001869!3.86e-12!21;UBERON:0000203!3.86e-12!21;UBERON:0007811!1.09e-11!86;UBERON:0002619!1.73e-11!17;UBERON:0001049!2.64e-11!52;UBERON:0005068!2.64e-11!52;UBERON:0006241!2.64e-11!52;UBERON:0007135!2.64e-11!52;UBERON:0002780!3.50e-11!39;UBERON:0001890!3.50e-11!39;UBERON:0006240!3.50e-11!39;UBERON:0003080!8.99e-11!40;UBERON:0000153!5.62e-10!94 | |ontology_enrichment_uberon=UBERON:0002021!2.59e-18!10;UBERON:0000411!2.59e-18!10;UBERON:0001950!2.59e-18!10;UBERON:0002346!1.63e-17!71;UBERON:0003075!1.63e-17!71;UBERON:0007284!1.63e-17!71;UBERON:0004121!1.11e-16!102;UBERON:0000924!1.11e-16!102;UBERON:0006601!1.11e-16!102;UBERON:0000033!1.30e-16!63;UBERON:0001017!9.75e-16!73;UBERON:0005743!9.75e-16!73;UBERON:0000073!4.43e-15!75;UBERON:0001016!4.43e-15!75;UBERON:0000955!7.12e-15!50;UBERON:0006238!7.12e-15!50;UBERON:0003056!5.53e-14!49;UBERON:0002616!6.84e-14!49;UBERON:0002020!1.25e-13!34;UBERON:0002791!1.96e-13!29;UBERON:0003528!1.96e-13!29;UBERON:0001893!1.96e-13!29;UBERON:0000956!3.86e-12!21;UBERON:0001869!3.86e-12!21;UBERON:0000203!3.86e-12!21;UBERON:0007811!1.09e-11!86;UBERON:0002619!1.73e-11!17;UBERON:0001049!2.64e-11!52;UBERON:0005068!2.64e-11!52;UBERON:0006241!2.64e-11!52;UBERON:0007135!2.64e-11!52;UBERON:0002780!3.50e-11!39;UBERON:0001890!3.50e-11!39;UBERON:0006240!3.50e-11!39;UBERON:0003080!8.99e-11!40;UBERON:0000153!5.62e-10!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.24e-67,10;UBERON:0000411,1.24e-67,10;UBERON:0001950,1.24e-67,10;UBERON:0002619,1.67e-39,17;UBERON:0000956,7.80e-32,21;UBERON:0001869,7.80e-32,21;UBERON:0000203,7.80e-32,21;UBERON:0003528,7.97e-23,29;UBERON:0002791,7.97e-23,29;UBERON:0001893,7.97e-23,29;UBERON:0002020,2.44e-19,34;UBERON:0002780,9.65e-17,39;UBERON:0001890,9.65e-17,39;UBERON:0006240,9.65e-17,39;UBERON:0003080,2.67e-16,40;UBERON:0003056,7.01e-16,49;UBERON:0000073,2.51e-14,54;UBERON:0002346,2.96e-14,64;UBERON:0003075,2.96e-14,64;UBERON:0007284,2.96e-14,64;UBERON:0002616,4.76e-14,46;UBERON:0000955,9.93e-14,47;UBERON:0006238,9.93e-14,47;UBERON:0001017,2.29e-12,73;UBERON:0010371,2.35e-12,73;UBERON:0001049,2.59e-12,52;UBERON:0005068,2.59e-12,52;UBERON:0006241,2.59e-12,52;UBERON:0007135,2.59e-12,52;UBERON:0001016,5.27e-12,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0010314,1.50e-09,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0.251308704225729,0.869121600961382,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,1.05493372485001,0.476255494059295,0.640568601424249,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,1.29254038639679,0,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,7.34177395402186,2.30162618253588,5.15605962095457,2.40594455281163,2.05524755931193,7.55393897389701,2.70009000092722,3.60256962579376,7.70342095273148,6.21312374102184,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0.251308704225729,0.869121600961382,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,1.05493372485001,0.476255494059295,0.640568601424249,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,1.29254038639679,0,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,7.34177395402186,2.30162618253588,5.15605962095457,2.40594455281163,2.05524755931193,7.55393897389701,2.70009000092722,3.60256962579376,7.70342095273148,6.21312374102184,0,0.399024873401031,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr10:108236915..108236920,- | |short_description=p@chr10:108236915..108236920,- | ||
}} | }} |
Latest revision as of 20:29, 3 August 2015
Short description: | p@chr10:108236915..108236920, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:108236915..108236920, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.24e-67 | 10 |
visual cortex | 1.24e-67 | 10 |
neocortex | 1.24e-67 | 10 |
regional part of cerebral cortex | 1.67e-39 | 17 |
cerebral cortex | 7.80e-32 | 21 |
cerebral hemisphere | 7.80e-32 | 21 |
pallium | 7.80e-32 | 21 |
brain grey matter | 7.97e-23 | 29 |
regional part of telencephalon | 7.97e-23 | 29 |
telencephalon | 7.97e-23 | 29 |
gray matter | 2.44e-19 | 34 |
regional part of forebrain | 9.65e-17 | 39 |
forebrain | 9.65e-17 | 39 |
future forebrain | 9.65e-17 | 39 |
anterior neural tube | 2.67e-16 | 40 |
pre-chordal neural plate | 7.01e-16 | 49 |
regional part of nervous system | 2.51e-14 | 54 |
neurectoderm | 2.96e-14 | 64 |
neural plate | 2.96e-14 | 64 |
presumptive neural plate | 2.96e-14 | 64 |
regional part of brain | 4.76e-14 | 46 |
brain | 9.93e-14 | 47 |
future brain | 9.93e-14 | 47 |
central nervous system | 2.29e-12 | 73 |
ecto-epithelium | 2.35e-12 | 73 |
neural tube | 2.59e-12 | 52 |
neural rod | 2.59e-12 | 52 |
future spinal cord | 2.59e-12 | 52 |
neural keel | 2.59e-12 | 52 |
nervous system | 5.27e-12 | 75 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
structure with developmental contribution from neural crest | 1.50e-09 | 92 |