FFCP PHASE1:Mm9::chr13:99870653..99870674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=84 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000099271,uc007rpk.1_5end | |association_with_transcript=0bp_to_ENSMUST00000099271,uc007rpk.1_5end | ||
|cluster_id=chr13:99870653..99870674,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000099271_5end,CAGE_peak_1_at_uc007rpk.1_5end | |description=CAGE_peak_1_at_ENSMUST00000099271_5end,CAGE_peak_1_at_uc007rpk.1_5end | ||
|id=chr13:99870653..99870674,+ | |id=chr13:99870653..99870674,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.96e-10,9;CL:0000333,5.67e-08,10;CL:0000095,5.67e-08,10;CL:0000243,5.67e-08,10;CL:0000123,5.67e-08,10;CL:0000125,5.67e-08,10;CL:0000030,5.67e-08,10;CL:0000339,5.67e-08,10;CL:0000128,9.45e-08,6;CL:0000126,9.45e-08,6;CL:0000127,9.45e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.21e-14!102;UBERON:0000924!8.21e-14!102;UBERON:0006601!8.21e-14!102;UBERON:0002346!2.66e-11!71;UBERON:0003075!2.66e-11!71;UBERON:0007284!2.66e-11!71;UBERON:0000073!4.10e-11!75;UBERON:0001016!4.10e-11!75;UBERON:0001017!3.16e-10!73;UBERON:0005743!3.16e-10!73;UBERON:0002342!2.27e-07!10;UBERON:0005062!2.27e-07!10;UBERON:0000010!4.47e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.91e-13,11;UBERON:0002369,1.77e-12,7;UBERON:0006858,1.77e-12,7;UBERON:0002410,1.96e-10,9;UBERON:0001016,4.69e-10,75;UBERON:0001017,1.24e-08,73;UBERON:0001894,2.42e-08,10;UBERON:0006222,2.42e-08,10;UBERON:0000007,3.75e-08,8;UBERON:0003296,3.75e-08,8;UBERON:0010133,3.75e-08,8;UBERON:0003064,2.13e-07,14;UBERON:0010314,2.73e-07,92;UBERON:0004121,2.73e-07,95;UBERON:0000924,2.73e-07,95;UBERON:0006601,2.73e-07,95 | |||
|phase1_expression=0.960893082628764,0,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.86152399231815,0,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0.166234645358492,0,4.60384793810598,3.906676722619,3.66466620781659,5.88231488031014,8.19654581950135,7.2826552954673,0,0,0,0,6.97680500417429,2.63623419281366,1.94429899074283,3.3596741190087,4.31257693094915,0,0,0,3.08711323243136,0.286533439938757,0.515672092277442,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0,0.311068836925433,0,0.210324961351382,0.285650984403804,0.883474163806454,0.367472397644862,0.479227355091182,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0.548925861614458,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,1.21161909333094,2.41828992341714,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,1.03909497345377,2.60227990149204,4.56698217468212,5.07354093963329,11.3041980414467,5.87943535678524,3.26733137457156,0.988779870937496,0,0,0,0.883366073841574,1.45462575940567,0,0,1.8850203613211,0,0.479260498023681,0.599902730993408,0.381210681219194,0.599162557619291,0,0.125654352112864,1.39059456153821,0.255715457330331,0.62336413367868,1.62241263067758,0.203678727700633,0.995255764880744,5.05445516867349,0,0,0.459804208866946,0.180062129805349,0.452114453507145,0.544291993210623,0.2562274405697,0.562210347358373,1.55222022443409,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,1.28673953557358,1.70498099637356,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.398282546508734,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0.500535317148282,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0.481651769963376,1.52375192569864,0,0.757412781613119,1.89304931649754,1.17131623288992,1.29254038639679,2.38968797952552,1.55959071857676,1.13230612315533,0.809621403349789,2.63030272120181,3.55759000151871,0,1.98716119291576,0.178065603667255,0,0.329940245945071,0,0,0,0.188605079755898,0.885905678642318,0,0.516856586336442,0,0.356497378384721,0,0,0,17.702859499197,1.44048875225048,0.517434735131018,0,1.24138163549592,6.42127743367454,7.0756078858912,18.8768268451052,0,0,0,0,0.807322133479528,0,0,0.164140899745061,0,1.29797711407357,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0.724752362478018,1.72818003754719,0,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,5.77163478772568,0.269141569828427,5.03653849092235,0,0.750729901804728,0.183151624267265,0,0,0,0.460325236507177,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0.415149390336707,0.798049746802062,0.341467211508268,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0,0.377252682772152,0.468207537349412,0.256100609619477,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.294397840268795,0.685738504770831,0,1.1921809497366,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,1.53030665655075,0.220591419119515,0 | |phase1_expression=0.960893082628764,0,0.454999239389536,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.86152399231815,0,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0.166234645358492,0,4.60384793810598,3.906676722619,3.66466620781659,5.88231488031014,8.19654581950135,7.2826552954673,0,0,0,0,6.97680500417429,2.63623419281366,1.94429899074283,3.3596741190087,4.31257693094915,0,0,0,3.08711323243136,0.286533439938757,0.515672092277442,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.898800331555214,0,0.311068836925433,0,0.210324961351382,0.285650984403804,0.883474163806454,0.367472397644862,0.479227355091182,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0.548925861614458,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,1.21161909333094,2.41828992341714,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,1.03909497345377,2.60227990149204,4.56698217468212,5.07354093963329,11.3041980414467,5.87943535678524,3.26733137457156,0.988779870937496,0,0,0,0.883366073841574,1.45462575940567,0,0,1.8850203613211,0,0.479260498023681,0.599902730993408,0.381210681219194,0.599162557619291,0,0.125654352112864,1.39059456153821,0.255715457330331,0.62336413367868,1.62241263067758,0.203678727700633,0.995255764880744,5.05445516867349,0,0,0.459804208866946,0.180062129805349,0.452114453507145,0.544291993210623,0.2562274405697,0.562210347358373,1.55222022443409,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,1.28673953557358,1.70498099637356,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0.398282546508734,0,0.456994050438915,0,0,0,0,0,0,0,0,0,0.500535317148282,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0.481651769963376,1.52375192569864,0,0.757412781613119,1.89304931649754,1.17131623288992,1.29254038639679,2.38968797952552,1.55959071857676,1.13230612315533,0.809621403349789,2.63030272120181,3.55759000151871,0,1.98716119291576,0.178065603667255,0,0.329940245945071,0,0,0,0.188605079755898,0.885905678642318,0,0.516856586336442,0,0.356497378384721,0,0,0,17.702859499197,1.44048875225048,0.517434735131018,0,1.24138163549592,6.42127743367454,7.0756078858912,18.8768268451052,0,0,0,0,0.807322133479528,0,0,0.164140899745061,0,1.29797711407357,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0.724752362478018,1.72818003754719,0,0.202725215290164,0.205421914329655,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,5.77163478772568,0.269141569828427,5.03653849092235,0,0.750729901804728,0.183151624267265,0,0,0,0.460325236507177,1.71868654031819,0.859265911718438,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0.415149390336707,0.798049746802062,0.341467211508268,0,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0,0.377252682772152,0.468207537349412,0.256100609619477,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.294397840268795,0.685738504770831,0,1.1921809497366,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,1.53030665655075,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000099271,p1@uc007rpk.1 | |short_description=p1@ENSMUST00000099271,p1@uc007rpk.1 | ||
}} | }} |
Latest revision as of 21:20, 3 August 2015
Short description: | p1@ENSMUST00000099271, p1@uc007rpk.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000099271_5end, CAGE_peak_1_at_uc007rpk.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | 0bp_to_ENSMUST00000099271, uc007rpk.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.96e-10 | 9 |
migratory neural crest cell | 5.67e-08 | 10 |
neuron associated cell | 5.67e-08 | 10 |
glial cell (sensu Vertebrata) | 5.67e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 5.67e-08 | 10 |
glial cell | 5.67e-08 | 10 |
glioblast | 5.67e-08 | 10 |
glioblast (sensu Vertebrata) | 5.67e-08 | 10 |
oligodendrocyte | 9.45e-08 | 6 |
macroglial cell | 9.45e-08 | 6 |
astrocyte | 9.45e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.91e-13 | 11 |
adrenal gland | 1.77e-12 | 7 |
adrenal/interrenal gland | 1.77e-12 | 7 |
autonomic nervous system | 1.96e-10 | 9 |
nervous system | 4.69e-10 | 75 |
central nervous system | 1.24e-08 | 73 |
diencephalon | 2.42e-08 | 10 |
future diencephalon | 2.42e-08 | 10 |
pituitary gland | 3.75e-08 | 8 |
gland of diencephalon | 3.75e-08 | 8 |
neuroendocrine gland | 3.75e-08 | 8 |
intermediate mesoderm | 2.13e-07 | 14 |
structure with developmental contribution from neural crest | 2.73e-07 | 92 |
ectoderm-derived structure | 2.73e-07 | 95 |
ectoderm | 2.73e-07 | 95 |
presumptive ectoderm | 2.73e-07 | 95 |