FFCP PHASE1:Mm9::chr2:120862486..120862510,-: Difference between revisions
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{{FFCP|EntrezGene=13828|HGNC=|MCL_coexpression_id=15|UniProt=P49222,Q3UV95|association_with_transcript=0bp_to_NM_013513,uc008lxj.1,uc008lxk.1_5end|description=CAGE_peak_3_at_Epb4.2_5end|id=chr2:120862486..120862510,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.09e-08,6;UBERON:0004457,2.09e-08,6;UBERON:0000042,2.09e-08,6;UBERON:0004854,2.09e-08,6;UBERON:0009034,2.09e-08,6;UBERON:0002095,2.09e-08,6;UBERON:0004782,2.09e-08,6;UBERON:0003281,2.09e-08,6;UBERON:0009664,2.09e-08,6;UBERON:0002296,2.09e-08,6;UBERON:0005602,2.09e-08,6;UBERON:0001179,2.09e-08,6;UBERON:0006293,2.09e-08,6;UBERON:0005172,4.77e-07,49;UBERON:0005173,4.77e-07,49;UBERON:0002417,4.77e-07,49;UBERON:0000916,4.77e-07,49|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,34.6434152288289,51.4287179170158,58.7631977627643,0,0.411343300817216,1.27316895539409,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,3.07532393792285,0,0,0.166234645358492,0,1.25559489221072,0,1.57057123192139,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,3.29622120855658,1.21786191324856,2.07553947530453,0.60289056221049,0.940709657085638,0,0.494389935468748,0.144599356919912,14.153768831198,3.72063754879041,20.3174196983562,26.183263669302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,11.9430691785689,0,0,0.130120442962704,0.229902104433473,0,1.50704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.59710280045548,0,0,0,2.27838349789052,2.81431271977315,0.900310307305074,0,0.590292695242212,0.308534225774757,0,0,0.233530684734339,0,0.492502392237286,0.405344047729279,0.292399974850665,1.09775057645525,0,0,0,0,0,0.213288250535234,1.62565670302307,0.77320476793256,0.403367049246685,0,0.380451252225118,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,1.25673363870702,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,34.5369368832315,42.4567429444518,56.2155280962134,72.218203214307,63.670770174638,53.7260547258796,33.9481442191957,12.4844124616777,12.9043864198398,2.87536413054709,4.09355042435354,0,0,0,0,0,0.568474235311454,0.325929952884052,0,0,0,1.19021820443007,0.195133647857799,0.788175720530955,0.664394068946325,0.318909537314974,0.81931657357869,0.172684981865896,0.578596234326046,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,1.24645922567079,0.651547837414304,0,0,0.485561272309963,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0.727067458955011,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0,0.258717367565509,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,30.9276294244113,3.714963623338,15.1859512443164,63.2918015535762,42.5119048212388,40.9512930039675,0,0,0,0,0.790839983952838,1.21991680276109,0.216010681643603,0.209088296014469,1.31017538247707,0.539457385539283,0.330613822901344,0,0,0,0,0.149516546043979,0.496375471371293,0,0.387479470433193,0,0.352071715937262,0,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0.295379054349154,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,5.58634822761443,4.78054096111576,11.4260157022098,7.54607385460736,3.49302666055027,2.66696073361938,2.67845574410562,4.1719497246936,3.79045817645696,4.05566879824384,3.77252682772152,2.99652823903624,3.26528277264833,3.50356360629241,3.33405583898152,3.1288768005111,3.6652751888104,3.29668720642645,3.38557516309114,3.77156177623957,1.77475806159337,3.09967046931517,3.48831399917588,3.29382831453657,3.80765735512544,3.10977553883713,6.57674278594607,3.53090695999241,1.68342681497322,3.91495559809775,2.26560309463796,3.27384834535751,4.64810523557898,3.47231899766054,0,4.67863216890817,2.57845264857958,0.57386499620653,2.64709702943419,7.18790290423307|short_description=p3@Epb4.2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13828 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P49222,uniprot:Q3UV95 | |||
|association_with_transcript=0bp_to_NM_013513,uc008lxj.1,uc008lxk.1_5end | |||
|cluster_id=chr2:120862486..120862510,- | |||
|description=CAGE_peak_3_at_Epb4.2_5end | |||
|id=chr2:120862486..120862510,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.09e-08,6;UBERON:0004457,2.09e-08,6;UBERON:0000042,2.09e-08,6;UBERON:0004854,2.09e-08,6;UBERON:0009034,2.09e-08,6;UBERON:0002095,2.09e-08,6;UBERON:0004782,2.09e-08,6;UBERON:0003281,2.09e-08,6;UBERON:0009664,2.09e-08,6;UBERON:0002296,2.09e-08,6;UBERON:0005602,2.09e-08,6;UBERON:0001179,2.09e-08,6;UBERON:0006293,2.09e-08,6;UBERON:0005172,4.77e-07,49;UBERON:0005173,4.77e-07,49;UBERON:0002417,4.77e-07,49;UBERON:0000916,4.77e-07,49 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,34.6434152288289,51.4287179170158,58.7631977627643,0,0.411343300817216,1.27316895539409,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.27006134691926,3.07532393792285,0,0,0.166234645358492,0,1.25559489221072,0,1.57057123192139,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,3.29622120855658,1.21786191324856,2.07553947530453,0.60289056221049,0.940709657085638,0,0.494389935468748,0.144599356919912,14.153768831198,3.72063754879041,20.3174196983562,26.183263669302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,11.9430691785689,0,0,0.130120442962704,0.229902104433473,0,1.50704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.59710280045548,0,0,0,2.27838349789052,2.81431271977315,0.900310307305074,0,0.590292695242212,0.308534225774757,0,0,0.233530684734339,0,0.492502392237286,0.405344047729279,0.292399974850665,1.09775057645525,0,0,0,0,0,0.213288250535234,1.62565670302307,0.77320476793256,0.403367049246685,0,0.380451252225118,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,1.25673363870702,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,34.5369368832315,42.4567429444518,56.2155280962134,72.218203214307,63.670770174638,53.7260547258796,33.9481442191957,12.4844124616777,12.9043864198398,2.87536413054709,4.09355042435354,0,0,0,0,0,0.568474235311454,0.325929952884052,0,0,0,1.19021820443007,0.195133647857799,0.788175720530955,0.664394068946325,0.318909537314974,0.81931657357869,0.172684981865896,0.578596234326046,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,1.24645922567079,0.651547837414304,0,0,0.485561272309963,0,0.754420319023592,0.295301892880773,0.307435147943927,0,0.727067458955011,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0,0.258717367565509,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,30.9276294244113,3.714963623338,15.1859512443164,63.2918015535762,42.5119048212388,40.9512930039675,0,0,0,0,0.790839983952838,1.21991680276109,0.216010681643603,0.209088296014469,1.31017538247707,0.539457385539283,0.330613822901344,0,0,0,0,0.149516546043979,0.496375471371293,0,0.387479470433193,0,0.352071715937262,0,0,0,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0.295379054349154,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,5.58634822761443,4.78054096111576,11.4260157022098,7.54607385460736,3.49302666055027,2.66696073361938,2.67845574410562,4.1719497246936,3.79045817645696,4.05566879824384,3.77252682772152,2.99652823903624,3.26528277264833,3.50356360629241,3.33405583898152,3.1288768005111,3.6652751888104,3.29668720642645,3.38557516309114,3.77156177623957,1.77475806159337,3.09967046931517,3.48831399917588,3.29382831453657,3.80765735512544,3.10977553883713,6.57674278594607,3.53090695999241,1.68342681497322,3.91495559809775,2.26560309463796,3.27384834535751,4.64810523557898,3.47231899766054,0,4.67863216890817,2.57845264857958,0.57386499620653,2.64709702943419,7.18790290423307 | |||
|short_description=p3@Epb4.2 | |||
}} |
Revision as of 21:30, 3 August 2015
Short description: | p3@Epb4.2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Epb4.2_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_NM_013513, uc008lxj.1, uc008lxk.1_5end |
EntrezGene: | 13828 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.09e-08 | 6 |
cavity lining | 2.09e-08 | 6 |
serous membrane | 2.09e-08 | 6 |
gastrointestinal system mesentery | 2.09e-08 | 6 |
stomach region | 2.09e-08 | 6 |
mesentery | 2.09e-08 | 6 |
gastrointestinal system serosa | 2.09e-08 | 6 |
mesentery of stomach | 2.09e-08 | 6 |
gut mesentery | 2.09e-08 | 6 |
dorsal mesentery | 2.09e-08 | 6 |
dorsal mesogastrium | 2.09e-08 | 6 |
peritoneal cavity | 2.09e-08 | 6 |
spleen primordium | 2.09e-08 | 6 |
abdomen element | 4.77e-07 | 49 |
abdominal segment element | 4.77e-07 | 49 |
abdominal segment of trunk | 4.77e-07 | 49 |
abdomen | 4.77e-07 | 49 |