FFCP PHASE1:Mm9::chr3:68810345..68810351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:68810345..68810351,- | |||
|description=CAGE_peak_at_chr3:68810345..68810351,- | |description=CAGE_peak_at_chr3:68810345..68810351,- | ||
|id=chr3:68810345..68810351,- | |id=chr3:68810345..68810351,- | ||
|ontology_enrichment_celltype=CL:0000624!7.29e-22!8;CL:0000791!2.42e-19!9;CL:0000789!2.42e-19!9;CL:0002420!2.42e-19!9;CL:0002419!2.42e-19!9;CL:0000790!2.42e-19!9;CL:0000084!1.13e-15!11;CL:0000827!1.13e-15!11;CL:0000893!6.56e-15!6;CL:0002489!6.56e-15!6;CL:0000898!6.56e-15!6;CL:0000809!6.56e-15!6;CL:0000810!6.56e-15!6;CL:0000895!6.56e-15!6;CL:0000808!6.56e-15!6;CL:0000894!6.56e-15!6;CL:0000806!6.56e-15!6;CL:0000807!6.56e-15!6;CL:0000805!6.56e-15!6;CL:0002425!6.56e-15!6;CL:0002436!6.56e-15!6;CL:0002427!6.56e-15!6;CL:0002428!6.56e-15!6;CL:0002429!6.56e-15!6;CL:0002433!6.56e-15!6;CL:0002431!6.56e-15!6;CL:0002432!6.56e-15!6;CL:0000838!2.70e-14!12;CL:0000542!3.95e-13!13;CL:0000051!3.95e-13!13;CL:0002031!2.07e-10!25;CL:0000738!7.81e-10!17;CL:0002087!7.81e-10!17;CL:0000988!8.06e-08!32;CL:0002032!8.06e-08!32;CL:0000037!8.06e-08!32;CL:0000566!8.06e-08!32;CL:0000837!8.06e-08!32 | |ontology_enrichment_celltype=CL:0000624!7.29e-22!8;CL:0000791!2.42e-19!9;CL:0000789!2.42e-19!9;CL:0002420!2.42e-19!9;CL:0002419!2.42e-19!9;CL:0000790!2.42e-19!9;CL:0000084!1.13e-15!11;CL:0000827!1.13e-15!11;CL:0000893!6.56e-15!6;CL:0002489!6.56e-15!6;CL:0000898!6.56e-15!6;CL:0000809!6.56e-15!6;CL:0000810!6.56e-15!6;CL:0000895!6.56e-15!6;CL:0000808!6.56e-15!6;CL:0000894!6.56e-15!6;CL:0000806!6.56e-15!6;CL:0000807!6.56e-15!6;CL:0000805!6.56e-15!6;CL:0002425!6.56e-15!6;CL:0002436!6.56e-15!6;CL:0002427!6.56e-15!6;CL:0002428!6.56e-15!6;CL:0002429!6.56e-15!6;CL:0002433!6.56e-15!6;CL:0002431!6.56e-15!6;CL:0002432!6.56e-15!6;CL:0000838!2.70e-14!12;CL:0000542!3.95e-13!13;CL:0000051!3.95e-13!13;CL:0002031!2.07e-10!25;CL:0000738!7.81e-10!17;CL:0002087!7.81e-10!17;CL:0000988!8.06e-08!32;CL:0002032!8.06e-08!32;CL:0000037!8.06e-08!32;CL:0000566!8.06e-08!32;CL:0000837!8.06e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.07e-23,1;CL:0000792,5.07e-23,1;CL:0000624,7.14e-12,8;CL:0000791,1.13e-10,9;CL:0000789,1.13e-10,9;CL:0002420,1.13e-10,9;CL:0002419,1.13e-10,9;CL:0000790,1.13e-10,9;CL:0000084,6.35e-09,11;CL:0000827,6.35e-09,11;CL:0000838,2.89e-08,12;CL:0000542,1.05e-07,13;CL:0000051,1.05e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.66e-33!23;UBERON:0000974!2.66e-33!23;UBERON:0004807!2.66e-33!23;UBERON:0005058!2.66e-33!23;UBERON:0003351!2.66e-33!23;UBERON:0009113!2.66e-33!23;UBERON:0003295!2.66e-33!23;UBERON:0009722!2.66e-33!23;UBERON:0005562!2.66e-33!23;UBERON:0007690!2.66e-33!23;UBERON:0006562!8.51e-32!24;UBERON:0003408!8.51e-32!24;UBERON:0001557!8.51e-32!24;UBERON:0001042!8.51e-32!24;UBERON:0008814!8.51e-32!24;UBERON:0009145!8.51e-32!24;UBERON:0004177!1.78e-29!29;UBERON:0000072!5.98e-28!27;UBERON:0002390!5.21e-23!45;UBERON:0003061!5.21e-23!45;UBERON:0002193!2.32e-21!48;UBERON:0000063!6.55e-21!35;UBERON:0000065!1.98e-17!41;UBERON:0001004!6.02e-17!42;UBERON:0005057!1.91e-15!51;UBERON:0002405!1.41e-13!70;UBERON:0003929!2.94e-12!55;UBERON:0003081!1.95e-11!88;UBERON:0002368!5.38e-11!60;UBERON:0000949!4.52e-10!72;UBERON:0002530!6.29e-10!65;UBERON:0000490!9.84e-10!66;UBERON:0005911!3.48e-09!69;UBERON:0001041!2.52e-08!92;UBERON:0000077!9.99e-08!97;UBERON:0000064!1.82e-07!99;UBERON:0007811!8.41e-07!86 | |ontology_enrichment_uberon=UBERON:0002370!2.66e-33!23;UBERON:0000974!2.66e-33!23;UBERON:0004807!2.66e-33!23;UBERON:0005058!2.66e-33!23;UBERON:0003351!2.66e-33!23;UBERON:0009113!2.66e-33!23;UBERON:0003295!2.66e-33!23;UBERON:0009722!2.66e-33!23;UBERON:0005562!2.66e-33!23;UBERON:0007690!2.66e-33!23;UBERON:0006562!8.51e-32!24;UBERON:0003408!8.51e-32!24;UBERON:0001557!8.51e-32!24;UBERON:0001042!8.51e-32!24;UBERON:0008814!8.51e-32!24;UBERON:0009145!8.51e-32!24;UBERON:0004177!1.78e-29!29;UBERON:0000072!5.98e-28!27;UBERON:0002390!5.21e-23!45;UBERON:0003061!5.21e-23!45;UBERON:0002193!2.32e-21!48;UBERON:0000063!6.55e-21!35;UBERON:0000065!1.98e-17!41;UBERON:0001004!6.02e-17!42;UBERON:0005057!1.91e-15!51;UBERON:0002405!1.41e-13!70;UBERON:0003929!2.94e-12!55;UBERON:0003081!1.95e-11!88;UBERON:0002368!5.38e-11!60;UBERON:0000949!4.52e-10!72;UBERON:0002530!6.29e-10!65;UBERON:0000490!9.84e-10!66;UBERON:0005911!3.48e-09!69;UBERON:0001041!2.52e-08!92;UBERON:0000077!9.99e-08!97;UBERON:0000064!1.82e-07!99;UBERON:0007811!8.41e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.18e-09,23;UBERON:0000974,2.18e-09,23;UBERON:0004807,2.18e-09,23;UBERON:0005058,2.18e-09,23;UBERON:0003351,2.18e-09,23;UBERON:0009113,2.18e-09,23;UBERON:0003295,2.18e-09,23;UBERON:0009722,2.18e-09,23;UBERON:0005562,2.18e-09,23;UBERON:0007690,2.18e-09,23;UBERON:0006562,4.94e-09,24;UBERON:0003408,4.94e-09,24;UBERON:0001557,4.94e-09,24;UBERON:0001042,4.94e-09,24;UBERON:0008814,4.94e-09,24;UBERON:0009145,4.94e-09,24;UBERON:0000072,4.02e-08,27;UBERON:0004177,1.28e-07,29;UBERON:0005057,1.28e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.140788722151667,0,0.34243593645101,0.0797721589953364,1.19840510951844,0.611942816932982,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0.79472541912506,0.480781798079875,0.295379054349154,0.605798699688886,0.0762068066549998,0.504130925684203,0.584747284438515,1.73181314952593,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.93684985162364,0.140788722151667,0,0.34243593645101,0.0797721589953364,1.19840510951844,0.611942816932982,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0.79472541912506,0.480781798079875,0.295379054349154,0.605798699688886,0.0762068066549998,0.504130925684203,0.584747284438515,1.73181314952593,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:68810345..68810351,- | |short_description=p@chr3:68810345..68810351,- | ||
}} | }} |
Latest revision as of 23:43, 3 August 2015
Short description: | p@chr3:68810345..68810351, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:68810345..68810351, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.07e-23 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.07e-23 | 1 |
CD4-positive, alpha-beta T cell | 7.14e-12 | 8 |
mature alpha-beta T cell | 1.13e-10 | 9 |
alpha-beta T cell | 1.13e-10 | 9 |
immature T cell | 1.13e-10 | 9 |
mature T cell | 1.13e-10 | 9 |
immature alpha-beta T cell | 1.13e-10 | 9 |
T cell | 6.35e-09 | 11 |
pro-T cell | 6.35e-09 | 11 |
lymphoid lineage restricted progenitor cell | 2.89e-08 | 12 |
lymphocyte | 1.05e-07 | 13 |
common lymphoid progenitor | 1.05e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.18e-09 | 23 |
neck | 2.18e-09 | 23 |
respiratory system epithelium | 2.18e-09 | 23 |
hemolymphoid system gland | 2.18e-09 | 23 |
pharyngeal epithelium | 2.18e-09 | 23 |
thymic region | 2.18e-09 | 23 |
pharyngeal gland | 2.18e-09 | 23 |
entire pharyngeal arch endoderm | 2.18e-09 | 23 |
thymus primordium | 2.18e-09 | 23 |
early pharyngeal endoderm | 2.18e-09 | 23 |
pharynx | 4.94e-09 | 24 |
gland of gut | 4.94e-09 | 24 |
upper respiratory tract | 4.94e-09 | 24 |
chordate pharynx | 4.94e-09 | 24 |
pharyngeal arch system | 4.94e-09 | 24 |
pharyngeal region of foregut | 4.94e-09 | 24 |
segment of respiratory tract | 4.02e-08 | 27 |
hemopoietic organ | 1.28e-07 | 29 |
immune organ | 1.28e-07 | 29 |