FFCP PHASE1:Mm9::chr16:60605097..60605117,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13840|HGNC=|MCL_coexpression_id=362|UniProt=G1K381|association_with_transcript=-23bp_to_ENSMUST00000068860_5end|description=CAGE_peak_1_at_Epha6_5end|id=chr16:60605097..60605117,-|ontology_enrichment_celltype=CL:0000117!4.00e-11!23;CL:0000337!4.00e-11!23;CL:0000540!5.29e-07!33;CL:0000047!5.29e-07!33;CL:0000031!5.29e-07!33;CL:0000404!5.29e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-11,23;CL:0000337,1.65e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.38e-24!63;UBERON:0001049!4.78e-23!52;UBERON:0005068!4.78e-23!52;UBERON:0006241!4.78e-23!52;UBERON:0007135!4.78e-23!52;UBERON:0003056!2.05e-22!49;UBERON:0000955!2.83e-22!50;UBERON:0006238!2.83e-22!50;UBERON:0002346!5.04e-22!71;UBERON:0003075!5.04e-22!71;UBERON:0007284!5.04e-22!71;UBERON:0002616!2.15e-21!49;UBERON:0000073!1.04e-20!75;UBERON:0001016!1.04e-20!75;UBERON:0001017!1.64e-20!73;UBERON:0005743!1.64e-20!73;UBERON:0003080!4.52e-18!40;UBERON:0004121!8.13e-18!102;UBERON:0000924!8.13e-18!102;UBERON:0006601!8.13e-18!102;UBERON:0002780!2.27e-17!39;UBERON:0001890!2.27e-17!39;UBERON:0006240!2.27e-17!39;UBERON:0002020!6.19e-17!34;UBERON:0007811!1.74e-14!86;UBERON:0000153!2.64e-14!94;UBERON:0002791!8.01e-14!29;UBERON:0003528!8.01e-14!29;UBERON:0001893!8.01e-14!29;UBERON:0002619!1.66e-09!17;UBERON:0002021!1.75e-09!10;UBERON:0000411!1.75e-09!10;UBERON:0001950!1.75e-09!10;UBERON:0000956!3.01e-09!21;UBERON:0001869!3.01e-09!21;UBERON:0000203!3.01e-09!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.79e-28,64;UBERON:0003075,2.79e-28,64;UBERON:0007284,2.79e-28,64;UBERON:0000073,2.09e-26,54;UBERON:0001049,3.41e-24,52;UBERON:0005068,3.41e-24,52;UBERON:0006241,3.41e-24,52;UBERON:0007135,3.41e-24,52;UBERON:0010371,7.49e-23,73;UBERON:0003056,1.06e-22,49;UBERON:0001017,4.10e-22,73;UBERON:0004121,6.27e-22,95;UBERON:0000924,6.27e-22,95;UBERON:0006601,6.27e-22,95;UBERON:0001016,4.08e-21,75;UBERON:0000955,4.45e-20,47;UBERON:0006238,4.45e-20,47;UBERON:0002020,4.54e-20,34;UBERON:0002616,5.49e-19,46;UBERON:0003080,6.83e-17,40;UBERON:0002780,5.27e-16,39;UBERON:0001890,5.27e-16,39;UBERON:0006240,5.27e-16,39;UBERON:0003528,8.69e-16,29;UBERON:0002791,8.69e-16,29;UBERON:0001893,8.69e-16,29;UBERON:0010314,5.26e-15,92;UBERON:0002021,7.52e-13,10;UBERON:0000411,7.52e-13,10;UBERON:0001950,7.52e-13,10;UBERON:0002619,6.77e-11,17;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0003076,5.41e-08,12;UBERON:0003057,5.41e-08,12;UBERON:0002420,7.16e-08,8;UBERON:0007245,7.16e-08,8;UBERON:0010009,7.16e-08,8;UBERON:0010011,7.16e-08,8;UBERON:0000454,7.16e-08,8;UBERON:0000970,8.70e-07,9;UBERON:0000019,8.70e-07,9;UBERON:0000047,8.70e-07,9;UBERON:0010312,8.70e-07,9;UBERON:0004088,8.70e-07,9;UBERON:0002104,8.70e-07,9;UBERON:0001456,8.70e-07,9;UBERON:0003072,8.70e-07,9;UBERON:0004128,8.70e-07,9;UBERON:0003071,8.70e-07,9|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,4.43681982454325,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,3.71346279724945,5.07997644188711,1.71487118900936,0.862609239164127,0.919218786610021,14.3150645299205,20.1745994174597,22.4265538554115,1.97829431595291,1.09785172322892,2.6045668527838,9.21303896704557,14.069065250792,15.4326230254578,7.36571463684169,5.55249555116501,2.23679334990361,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,3.22058876712702,3.77004072264219,0,0,0,0,12.1330417917906,17.8425235099264,2.1361239859187,27.1165939499951,26.338692105024,17.0386196538839,22.7137768294861,0.81471491080253,0,0,1.05220927943237,3.25301107406759,4.13823787980251,3.06105620669094,2.56198190320716,1.49680298132921,1.15302348256365,1.21812241927647,1.29351685369508,0,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0,0.205782136407943,3.98068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,91.6864175739595,14.7153595702377,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,13.1651483789989,12.3072270921813,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,46.2702695647402,0,4.98583690268315,6.18970445543589,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,3.74483566329167,1.62054984628179,0.129358683782755,0.643011105094777,0.886701168211368,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0.216010681643603,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0,0,0,1.04661582230785,1.15820943319968,1.36115831840833,2.45403664607689,2.02747350588934,1.05621514781179,0.2604087696879,0.104859344425711,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,32.7556068717899,21.6352861158373,18.9055519435001,19.5912627871804,28.773465830367,26.4387864086395,23.6257875081132,22.0657389579868,21.2976932222576,32.1011393286128,0.207574695168353,0.399024873401031,1.70733605754134,0.243106717068294,0.628839487883947,0.367687016900028,2.66696073361938,1.85431551515005,1.92551525755089,0.758091635291392,1.52087579934144,1.69763707247469,1.31098110457835,1.40855335290712,1.43588672389033,0,1.27472758539341,2.12200142510076,2.06042950401653,1.32479028120958,0.342869252385415,1.4198064492747,0.715308569841963,1.30811774969096,1.31753132581463,1.35383372626682,0.73171189149109,1.31534855718921,1.08643291076689,1.68342681497322,1.06771516311757,1.47756723563345,2.86461730218783,1.23949472948773,2.3148793317737,1.24905288968973,0.935726433781634,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421|short_description=p1@Epha6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13840 | |||
|HGNC= | |||
|MCL_coexpression_id=362 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G1K381 | |||
|association_with_transcript=-23bp_to_ENSMUST00000068860_5end | |||
|cluster_id=chr16:60605097..60605117,- | |||
|description=CAGE_peak_1_at_Epha6_5end | |||
|id=chr16:60605097..60605117,- | |||
|ontology_enrichment_celltype=CL:0000117!4.00e-11!23;CL:0000337!4.00e-11!23;CL:0000540!5.29e-07!33;CL:0000047!5.29e-07!33;CL:0000031!5.29e-07!33;CL:0000404!5.29e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-11,23;CL:0000337,1.65e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.38e-24!63;UBERON:0001049!4.78e-23!52;UBERON:0005068!4.78e-23!52;UBERON:0006241!4.78e-23!52;UBERON:0007135!4.78e-23!52;UBERON:0003056!2.05e-22!49;UBERON:0000955!2.83e-22!50;UBERON:0006238!2.83e-22!50;UBERON:0002346!5.04e-22!71;UBERON:0003075!5.04e-22!71;UBERON:0007284!5.04e-22!71;UBERON:0002616!2.15e-21!49;UBERON:0000073!1.04e-20!75;UBERON:0001016!1.04e-20!75;UBERON:0001017!1.64e-20!73;UBERON:0005743!1.64e-20!73;UBERON:0003080!4.52e-18!40;UBERON:0004121!8.13e-18!102;UBERON:0000924!8.13e-18!102;UBERON:0006601!8.13e-18!102;UBERON:0002780!2.27e-17!39;UBERON:0001890!2.27e-17!39;UBERON:0006240!2.27e-17!39;UBERON:0002020!6.19e-17!34;UBERON:0007811!1.74e-14!86;UBERON:0000153!2.64e-14!94;UBERON:0002791!8.01e-14!29;UBERON:0003528!8.01e-14!29;UBERON:0001893!8.01e-14!29;UBERON:0002619!1.66e-09!17;UBERON:0002021!1.75e-09!10;UBERON:0000411!1.75e-09!10;UBERON:0001950!1.75e-09!10;UBERON:0000956!3.01e-09!21;UBERON:0001869!3.01e-09!21;UBERON:0000203!3.01e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.79e-28,64;UBERON:0003075,2.79e-28,64;UBERON:0007284,2.79e-28,64;UBERON:0000073,2.09e-26,54;UBERON:0001049,3.41e-24,52;UBERON:0005068,3.41e-24,52;UBERON:0006241,3.41e-24,52;UBERON:0007135,3.41e-24,52;UBERON:0010371,7.49e-23,73;UBERON:0003056,1.06e-22,49;UBERON:0001017,4.10e-22,73;UBERON:0004121,6.27e-22,95;UBERON:0000924,6.27e-22,95;UBERON:0006601,6.27e-22,95;UBERON:0001016,4.08e-21,75;UBERON:0000955,4.45e-20,47;UBERON:0006238,4.45e-20,47;UBERON:0002020,4.54e-20,34;UBERON:0002616,5.49e-19,46;UBERON:0003080,6.83e-17,40;UBERON:0002780,5.27e-16,39;UBERON:0001890,5.27e-16,39;UBERON:0006240,5.27e-16,39;UBERON:0003528,8.69e-16,29;UBERON:0002791,8.69e-16,29;UBERON:0001893,8.69e-16,29;UBERON:0010314,5.26e-15,92;UBERON:0002021,7.52e-13,10;UBERON:0000411,7.52e-13,10;UBERON:0001950,7.52e-13,10;UBERON:0002619,6.77e-11,17;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0003076,5.41e-08,12;UBERON:0003057,5.41e-08,12;UBERON:0002420,7.16e-08,8;UBERON:0007245,7.16e-08,8;UBERON:0010009,7.16e-08,8;UBERON:0010011,7.16e-08,8;UBERON:0000454,7.16e-08,8;UBERON:0000970,8.70e-07,9;UBERON:0000019,8.70e-07,9;UBERON:0000047,8.70e-07,9;UBERON:0010312,8.70e-07,9;UBERON:0004088,8.70e-07,9;UBERON:0002104,8.70e-07,9;UBERON:0001456,8.70e-07,9;UBERON:0003072,8.70e-07,9;UBERON:0004128,8.70e-07,9;UBERON:0003071,8.70e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,2.11596391708813,4.43681982454325,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,3.71346279724945,5.07997644188711,1.71487118900936,0.862609239164127,0.919218786610021,14.3150645299205,20.1745994174597,22.4265538554115,1.97829431595291,1.09785172322892,2.6045668527838,9.21303896704557,14.069065250792,15.4326230254578,7.36571463684169,5.55249555116501,2.23679334990361,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,3.22058876712702,3.77004072264219,0,0,0,0,12.1330417917906,17.8425235099264,2.1361239859187,27.1165939499951,26.338692105024,17.0386196538839,22.7137768294861,0.81471491080253,0,0,1.05220927943237,3.25301107406759,4.13823787980251,3.06105620669094,2.56198190320716,1.49680298132921,1.15302348256365,1.21812241927647,1.29351685369508,0,0.567318240503458,0.527853372491847,0.43839146485515,0.556094498451196,0,0.205782136407943,3.98068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,91.6864175739595,14.7153595702377,0.330418782983798,0,0.426576501070468,0,0.38660238396628,0,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,0,0.456994050438915,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,13.1651483789989,12.3072270921813,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,46.2702695647402,0,4.98583690268315,6.18970445543589,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,3.74483566329167,1.62054984628179,0.129358683782755,0.643011105094777,0.886701168211368,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.01659733563424,0.216010681643603,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,0,0,0,1.04661582230785,1.15820943319968,1.36115831840833,2.45403664607689,2.02747350588934,1.05621514781179,0.2604087696879,0.104859344425711,0,0,0,0.608175645870493,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,32.7556068717899,21.6352861158373,18.9055519435001,19.5912627871804,28.773465830367,26.4387864086395,23.6257875081132,22.0657389579868,21.2976932222576,32.1011393286128,0.207574695168353,0.399024873401031,1.70733605754134,0.243106717068294,0.628839487883947,0.367687016900028,2.66696073361938,1.85431551515005,1.92551525755089,0.758091635291392,1.52087579934144,1.69763707247469,1.31098110457835,1.40855335290712,1.43588672389033,0,1.27472758539341,2.12200142510076,2.06042950401653,1.32479028120958,0.342869252385415,1.4198064492747,0.715308569841963,1.30811774969096,1.31753132581463,1.35383372626682,0.73171189149109,1.31534855718921,1.08643291076689,1.68342681497322,1.06771516311757,1.47756723563345,2.86461730218783,1.23949472948773,2.3148793317737,1.24905288968973,0.935726433781634,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Epha6 | |||
}} |
Revision as of 00:20, 4 August 2015
Short description: | p1@Epha6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Epha6_5end |
Coexpression cluster: | MCL_coexpression_mm9:362 |
Association with transcript: | -23bp_to_ENSMUST00000068860_5end |
EntrezGene: | 13840 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.65e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-11 | 23 |