FFCP PHASE1:Mm9::chr10:127103654..127103679,-: Difference between revisions
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{{FFCP|EntrezGene=17937|HGNC=|MCL_coexpression_id=7|UniProt=Q3TYF1|association_with_transcript=8bp_to_ENSMUST00000099157_5end|description=CAGE_peak_2_at_Nab2_5end|id=chr10:127103654..127103679,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!3.31e-07!26;UBERON:0000990!3.31e-07!26;UBERON:0002370!4.71e-07!23;UBERON:0000974!4.71e-07!23;UBERON:0004807!4.71e-07!23;UBERON:0005058!4.71e-07!23;UBERON:0003351!4.71e-07!23;UBERON:0009113!4.71e-07!23;UBERON:0003295!4.71e-07!23;UBERON:0009722!4.71e-07!23;UBERON:0005562!4.71e-07!23;UBERON:0007690!4.71e-07!23;UBERON:0006562!6.01e-07!24;UBERON:0001557!6.01e-07!24;UBERON:0001042!6.01e-07!24;UBERON:0008814!6.01e-07!24;UBERON:0009145!6.01e-07!24;UBERON:0000991!7.01e-07!18;UBERON:0005564!7.01e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.12e-10,120;UBERON:0004120,8.12e-10,120;UBERON:0006603,8.12e-10,120;UBERON:0005156,3.13e-07,26;UBERON:0000990,3.13e-07,26;UBERON:0002370,4.45e-07,23;UBERON:0000974,4.45e-07,23;UBERON:0004807,4.45e-07,23;UBERON:0005058,4.45e-07,23;UBERON:0003351,4.45e-07,23;UBERON:0009113,4.45e-07,23;UBERON:0003295,4.45e-07,23;UBERON:0009722,4.45e-07,23;UBERON:0005562,4.45e-07,23;UBERON:0007690,4.45e-07,23;UBERON:0006562,5.68e-07,24;UBERON:0001557,5.68e-07,24;UBERON:0001042,5.68e-07,24;UBERON:0008814,5.68e-07,24;UBERON:0009145,5.68e-07,24;UBERON:0000991,6.64e-07,18;UBERON:0005564,6.64e-07,18;UBERON:0003408,9.62e-07,24|phase1_expression=6.24580503708696,0.697950815278722,1.81999695755814,0.60492842261366,0.500895729946347,0.503637815735669,0.233612640595526,13.5579489613655,93.7652889530101,117.266327687319,24.1417335197962,19.2250903178761,8.21763503669787,9.87850547334671,0.999329285446988,1.82227740650843,0,4.25873923233621,4.2505474417779,4.2438965179803,4.33720779770456,0.397163804803541,1.04479915655574,0.95995453676044,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.221730510655305,10.1604907753541,8.61090702618398,15.8481681015439,0.288851619751275,0,0,0,0,0,0,0,0,20.1434908760924,25.4456097360982,29.9181206023541,9.38869613217647,3.05235218932625,6.37089929929968,5.44403717407994,4.19959264876088,2.87505128729943,22.3150866056789,25.3876749703971,17.8129713545506,18.2654199585522,9.45560351797897,12.3761302146586,0.202316460859598,0,0,22.7025836486319,8.00365316500025,11.2487464660175,12.8552627133707,10.6572017241915,8.38880309451533,9.98967593836042,0.103689612308478,0.405017814995072,0.210324961351382,0.856952953211411,1.98781686856452,0.61245399607477,0.575072826109418,0,0,3.70293280447044,2.4577045320999,0.263772575460388,0.365950574409639,0.52091337055676,3.90856198601933,1.12552522006336,3.0559649555362,2.06240009831567,0.711858403995515,0.186399445825301,2.19605960666234,2.49386148352392,2.02905142091174,0,0,1.61910957491345,0,0.448026887097336,1.96622188184453,39.3694045155313,26.2383864648897,31.0938825569099,5.0703631119605,14.115912515575,40.7688383530633,7.11066703153331,1.5154372870785,1.77351905832569,4.54972000513305,3.4255163915718,2.07150306917737,7.42210695324124,4.68410382268567,5.1759131313064,5.07354093963329,2.11011696773672,4.70354828542819,3.14166478324189,2.96633961281249,3.03658649531814,1.76922110389975,3.558870698843,3.5334642953663,3.87900202508178,0,11.1256702864388,12.1479089951804,0.510914110417183,2.51611761462433,1.19980546198682,2.92261522268049,3.44518470631092,12.8100168789215,2.76439574648302,9.38651329038293,7.41574826257959,2.70124457927428,5.84068547043927,12.9335992089902,3.6078021476927,3.79084137650512,1.05220927943237,1.82168620147785,2.29902104433473,1.62055916824814,1.9591626318643,2.31324097114515,1.0249097622788,1.21812241927647,0.517406741478031,2.37124792226126,2.64748512234947,2.46331573829528,3.06874025398605,2.78047249225598,8.70630416305416,4.7329891373827,12.7381930763836,0.702213187313235,1.54408744268829,1.42081749697796,2.27838349789052,2.11073453982987,1.80062061461015,2.84093682702252,2.55793501271625,3.5481435964097,1.39520366850245,4.56064782379353,2.33530684734339,3.45575684818309,1.97000956894914,2.1888578577381,2.19299981137998,2.41505126820156,2.01309628140558,8.83217783969334,0.92614151141356,2.64335026387038,0.528901133327089,4.69234151177515,2.78684006232526,2.44848176511977,2.01683524623343,1.33426826306922,2.09248188723815,1.42358718463353,1.15289268306808,2.01068167040216,0.994782360205754,1.9496408711912,0.898819408654221,1.94524244887225,0.995706366271836,8.53505554288868,5.48392860526698,4.50830942692322,4.68398054044223,6.0125271021964,7.36426108848345,4.36332106157375,2.65698266363284,2.511979645462,1.72756029490521,1.77871576252289,1.66845105716094,0.982794975566015,1.34917267430912,1.82574109249653,1.92941727801933,1.01850340712568,0.863088412352432,0.648540907100142,1.37280706594041,0,3.34926852901653,2.80833905803104,5.80931419278357,2.87035861635059,3.37710464954357,1.84753190166605,2.08440552947533,2.933369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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17937 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TYF1 | |||
|association_with_transcript=8bp_to_ENSMUST00000099157_5end | |||
|cluster_id=chr10:127103654..127103679,- | |||
|description=CAGE_peak_2_at_Nab2_5end | |||
|id=chr10:127103654..127103679,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!3.31e-07!26;UBERON:0000990!3.31e-07!26;UBERON:0002370!4.71e-07!23;UBERON:0000974!4.71e-07!23;UBERON:0004807!4.71e-07!23;UBERON:0005058!4.71e-07!23;UBERON:0003351!4.71e-07!23;UBERON:0009113!4.71e-07!23;UBERON:0003295!4.71e-07!23;UBERON:0009722!4.71e-07!23;UBERON:0005562!4.71e-07!23;UBERON:0007690!4.71e-07!23;UBERON:0006562!6.01e-07!24;UBERON:0001557!6.01e-07!24;UBERON:0001042!6.01e-07!24;UBERON:0008814!6.01e-07!24;UBERON:0009145!6.01e-07!24;UBERON:0000991!7.01e-07!18;UBERON:0005564!7.01e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.12e-10,120;UBERON:0004120,8.12e-10,120;UBERON:0006603,8.12e-10,120;UBERON:0005156,3.13e-07,26;UBERON:0000990,3.13e-07,26;UBERON:0002370,4.45e-07,23;UBERON:0000974,4.45e-07,23;UBERON:0004807,4.45e-07,23;UBERON:0005058,4.45e-07,23;UBERON:0003351,4.45e-07,23;UBERON:0009113,4.45e-07,23;UBERON:0003295,4.45e-07,23;UBERON:0009722,4.45e-07,23;UBERON:0005562,4.45e-07,23;UBERON:0007690,4.45e-07,23;UBERON:0006562,5.68e-07,24;UBERON:0001557,5.68e-07,24;UBERON:0001042,5.68e-07,24;UBERON:0008814,5.68e-07,24;UBERON:0009145,5.68e-07,24;UBERON:0000991,6.64e-07,18;UBERON:0005564,6.64e-07,18;UBERON:0003408,9.62e-07,24 | |||
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| |||
|short_description=p2@Nab2 | |||
}} |
Revision as of 01:45, 4 August 2015
Short description: | p2@Nab2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nab2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 8bp_to_ENSMUST00000099157_5end |
EntrezGene: | 17937 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.12e-10 | 120 |
mesoderm-derived structure | 8.12e-10 | 120 |
presumptive mesoderm | 8.12e-10 | 120 |
reproductive structure | 3.13e-07 | 26 |
reproductive system | 3.13e-07 | 26 |
thymus | 4.45e-07 | 23 |
neck | 4.45e-07 | 23 |
respiratory system epithelium | 4.45e-07 | 23 |
hemolymphoid system gland | 4.45e-07 | 23 |
pharyngeal epithelium | 4.45e-07 | 23 |
thymic region | 4.45e-07 | 23 |
pharyngeal gland | 4.45e-07 | 23 |
entire pharyngeal arch endoderm | 4.45e-07 | 23 |
thymus primordium | 4.45e-07 | 23 |
early pharyngeal endoderm | 4.45e-07 | 23 |
pharynx | 5.68e-07 | 24 |
upper respiratory tract | 5.68e-07 | 24 |
chordate pharynx | 5.68e-07 | 24 |
pharyngeal arch system | 5.68e-07 | 24 |
pharyngeal region of foregut | 5.68e-07 | 24 |
gonad | 6.64e-07 | 18 |
gonad primordium | 6.64e-07 | 18 |
gland of gut | 9.62e-07 | 24 |