FFCP PHASE1:Mm9::chr19:40968642..40968653,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:40968642..40968653,+
|short_description=p@chr19:40968642..40968653,+
|description=CAGE_peak_at_chr19:40968642..40968653,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:40968642..40968653,+ | |||
|description=CAGE_peak_at_chr19:40968642..40968653,+ | |||
|id=chr19:40968642..40968653,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.72e-15!18;UBERON:0005564!7.72e-15!18;UBERON:0004176!8.81e-14!17;UBERON:0009196!8.81e-14!17;UBERON:0009117!8.81e-14!17;UBERON:0003133!6.10e-13!24;UBERON:0000473!7.39e-13!14;UBERON:0003135!1.08e-11!15;UBERON:0005156!1.93e-11!26;UBERON:0000990!1.93e-11!26;UBERON:0003101!1.12e-10!16;UBERON:0000079!1.12e-10!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,7.10e-41,24;UBERON:0000991,1.08e-40,18;UBERON:0005564,1.08e-40,18;UBERON:0005156,1.34e-37,26;UBERON:0000990,1.34e-37,26;UBERON:0004176,2.67e-36,17;UBERON:0009196,2.67e-36,17;UBERON:0009117,2.67e-36,17;UBERON:0000473,7.26e-30,14;UBERON:0003135,8.31e-28,15;UBERON:0003101,5.27e-26,16;UBERON:0000079,5.27e-26,16;UBERON:0002323,5.40e-19,37;UBERON:0004458,5.40e-19,37;UBERON:0003886,1.89e-18,38;UBERON:0002553,6.18e-18,39;UBERON:0005631,8.08e-16,3;UBERON:0000478,8.08e-16,3;UBERON:0000158,8.08e-16,3;UBERON:0001987,8.77e-11,2;UBERON:0003124,8.77e-11,2;UBERON:0004340,8.77e-11,2;UBERON:0003134,2.62e-10,8;UBERON:0000474,3.47e-09,9;UBERON:0000926,7.91e-08,120;UBERON:0004120,7.91e-08,120;UBERON:0006603,7.91e-08,120;UBERON:0000992,8.73e-08,3;UBERON:0003100,1.51e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.461230994512117,0,0,0.125666591329675,5.6854842578906,0,0,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0.20778804455956,0,0.305518091550949,0.124406970610093,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0,0.136072998302656,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,2.18937693500343,0,0.257347907114715,0,0,0,0.540186184383045,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0,1.95872164033981,2.93196526836437,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,1.87737366450968,1.0591603543191,0,0,0,0.120625849856312,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,23.675103424736,4.03694674318743,3.64008679005615,1.55560950675238,0.387479470433193,0.337912250981556,1.87771581833206,11.8485990207995,45.0895181030557,31.8891039490328,19.5860404255349,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0,0.201652370273681,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.287177344778066,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.461230994512117,0,0,0.125666591329675,5.6854842578906,0,0,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0.20778804455956,0,0.305518091550949,0.124406970610093,0,0,0.520481771850815,0.229902104433473,0.180062129805349,0,0.136072998302656,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,2.18937693500343,0,0.257347907114715,0,0,0,0.540186184383045,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0,1.95872164033981,2.93196526836437,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,1.87737366450968,1.0591603543191,0,0,0,0.120625849856312,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,23.675103424736,4.03694674318743,3.64008679005615,1.55560950675238,0.387479470433193,0.337912250981556,1.87771581833206,11.8485990207995,45.0895181030557,31.8891039490328,19.5860404255349,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0,0.201652370273681,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.287177344778066,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:40968642..40968653,+ | |||
}} | }} |
Latest revision as of 01:59, 4 August 2015
Short description: | p@chr19:40968642..40968653, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:40968642..40968653, + |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 7.10e-41 | 24 |
gonad | 1.08e-40 | 18 |
gonad primordium | 1.08e-40 | 18 |
reproductive structure | 1.34e-37 | 26 |
reproductive system | 1.34e-37 | 26 |
external genitalia | 2.67e-36 | 17 |
indifferent external genitalia | 2.67e-36 | 17 |
indifferent gonad | 2.67e-36 | 17 |
testis | 7.26e-30 | 14 |
male reproductive organ | 8.31e-28 | 15 |
male organism | 5.27e-26 | 16 |
male reproductive system | 5.27e-26 | 16 |
body cavity | 5.40e-19 | 37 |
body cavity or lining | 5.40e-19 | 37 |
body cavity precursor | 1.89e-18 | 38 |
anatomical cavity | 6.18e-18 | 39 |
extraembryonic membrane | 8.08e-16 | 3 |
extraembryonic structure | 8.08e-16 | 3 |
membranous layer | 8.08e-16 | 3 |
placenta | 8.77e-11 | 2 |
chorion | 8.77e-11 | 2 |
allantois | 8.77e-11 | 2 |
female reproductive organ | 2.62e-10 | 8 |
female reproductive system | 3.47e-09 | 9 |
mesoderm | 7.91e-08 | 120 |
mesoderm-derived structure | 7.91e-08 | 120 |
presumptive mesoderm | 7.91e-08 | 120 |
female gonad | 8.73e-08 | 3 |
female organism | 1.51e-07 | 11 |