FFCP PHASE1:Mm9::chr3:88019594..88019602,+: Difference between revisions
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{{FFCP|EntrezGene=387133|HGNC=|MCL_coexpression_id=580|UniProt=|association_with_transcript=74bp_to_NR_029817,uc012cro.1_5end|description=CAGE_peak_1_at_Mir9-1_5end|id=chr3:88019594..88019602,+|ontology_enrichment_celltype=CL:0000117!4.99e-19!23;CL:0000337!4.99e-19!23;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33;CL:0002319!1.55e-09!43;CL:0000221!3.44e-09!44;CL:0000133!3.44e-09!44;CL:0000393!6.22e-09!39;CL:0000211!6.22e-09!39;CL:0002609!7.12e-08!6;CL:0000055!2.05e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.37e-30!52;UBERON:0005068!4.37e-30!52;UBERON:0006241!4.37e-30!52;UBERON:0007135!4.37e-30!52;UBERON:0000955!5.18e-27!50;UBERON:0006238!5.18e-27!50;UBERON:0001017!1.78e-26!73;UBERON:0005743!1.78e-26!73;UBERON:0002020!1.83e-26!34;UBERON:0002616!5.29e-26!49;UBERON:0000073!1.96e-25!75;UBERON:0001016!1.96e-25!75;UBERON:0000033!2.97e-23!63;UBERON:0002346!8.17e-23!71;UBERON:0003075!8.17e-23!71;UBERON:0007284!8.17e-23!71;UBERON:0002791!1.76e-22!29;UBERON:0003528!1.76e-22!29;UBERON:0001893!1.76e-22!29;UBERON:0003080!5.06e-21!40;UBERON:0002780!1.03e-19!39;UBERON:0001890!1.03e-19!39;UBERON:0006240!1.03e-19!39;UBERON:0003056!1.26e-19!49;UBERON:0004121!2.23e-18!102;UBERON:0000924!2.23e-18!102;UBERON:0006601!2.23e-18!102;UBERON:0007811!5.48e-15!86;UBERON:0000956!2.70e-14!21;UBERON:0001869!2.70e-14!21;UBERON:0000203!2.70e-14!21;UBERON:0000153!8.67e-13!94;UBERON:0002619!7.74e-10!17;UBERON:0002420!1.40e-09!8;UBERON:0007245!1.40e-09!8;UBERON:0010009!1.40e-09!8;UBERON:0010011!1.40e-09!8;UBERON:0000454!1.40e-09!8;UBERON:0003076!1.71e-09!12;UBERON:0003057!1.71e-09!12;UBERON:0002298!5.56e-09!6;UBERON:0000025!6.03e-08!114;UBERON:0004111!8.37e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.50e-20,2;UBERON:0002298,2.50e-20,2;UBERON:0005290,2.50e-20,2;UBERON:0010096,2.50e-20,2;UBERON:0004733,2.24e-15,6;UBERON:0004732,2.24e-15,6;UBERON:0002028,2.24e-15,6;UBERON:0007277,2.24e-15,6;UBERON:0001851,2.90e-11,1;UBERON:0005889,2.90e-11,1;UBERON:0002259,3.65e-11,1;UBERON:0002314,3.65e-11,1;UBERON:0004061,3.65e-11,1;UBERON:0006777,3.65e-11,1;UBERON:0005882,3.65e-11,1;UBERON:0002616,2.84e-10,46;UBERON:0000955,4.74e-10,47;UBERON:0006238,4.74e-10,47;UBERON:0001049,4.60e-09,52;UBERON:0005068,4.60e-09,52;UBERON:0006241,4.60e-09,52;UBERON:0007135,4.60e-09,52;UBERON:0000073,1.02e-08,54;UBERON:0003076,5.25e-08,12;UBERON:0003057,5.25e-08,12;UBERON:0002346,2.57e-07,64;UBERON:0003075,2.57e-07,64;UBERON:0007284,2.57e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.420649922702764,0,0.883474163806454,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.8850203613211,0,0,0,0,1.49790639404823,1.37250180845588,0.502617408451458,0.521472960576829,1.53429274398198,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,3.2929475961371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,0.170733605754134,0,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0,0,0.532427418478012,0,0.145346416632329,0,0.169229215783353,0.548783918618318,0,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0,0|short_description=p1@Mir9-1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:387133 | |||
|HGNC= | |||
|MCL_coexpression_id=580 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=74bp_to_NR_029817,uc012cro.1_5end | |||
|cluster_id=chr3:88019594..88019602,+ | |||
|description=CAGE_peak_1_at_Mir9-1_5end | |||
|id=chr3:88019594..88019602,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.99e-19!23;CL:0000337!4.99e-19!23;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33;CL:0002319!1.55e-09!43;CL:0000221!3.44e-09!44;CL:0000133!3.44e-09!44;CL:0000393!6.22e-09!39;CL:0000211!6.22e-09!39;CL:0002609!7.12e-08!6;CL:0000055!2.05e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.37e-30!52;UBERON:0005068!4.37e-30!52;UBERON:0006241!4.37e-30!52;UBERON:0007135!4.37e-30!52;UBERON:0000955!5.18e-27!50;UBERON:0006238!5.18e-27!50;UBERON:0001017!1.78e-26!73;UBERON:0005743!1.78e-26!73;UBERON:0002020!1.83e-26!34;UBERON:0002616!5.29e-26!49;UBERON:0000073!1.96e-25!75;UBERON:0001016!1.96e-25!75;UBERON:0000033!2.97e-23!63;UBERON:0002346!8.17e-23!71;UBERON:0003075!8.17e-23!71;UBERON:0007284!8.17e-23!71;UBERON:0002791!1.76e-22!29;UBERON:0003528!1.76e-22!29;UBERON:0001893!1.76e-22!29;UBERON:0003080!5.06e-21!40;UBERON:0002780!1.03e-19!39;UBERON:0001890!1.03e-19!39;UBERON:0006240!1.03e-19!39;UBERON:0003056!1.26e-19!49;UBERON:0004121!2.23e-18!102;UBERON:0000924!2.23e-18!102;UBERON:0006601!2.23e-18!102;UBERON:0007811!5.48e-15!86;UBERON:0000956!2.70e-14!21;UBERON:0001869!2.70e-14!21;UBERON:0000203!2.70e-14!21;UBERON:0000153!8.67e-13!94;UBERON:0002619!7.74e-10!17;UBERON:0002420!1.40e-09!8;UBERON:0007245!1.40e-09!8;UBERON:0010009!1.40e-09!8;UBERON:0010011!1.40e-09!8;UBERON:0000454!1.40e-09!8;UBERON:0003076!1.71e-09!12;UBERON:0003057!1.71e-09!12;UBERON:0002298!5.56e-09!6;UBERON:0000025!6.03e-08!114;UBERON:0004111!8.37e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.50e-20,2;UBERON:0002298,2.50e-20,2;UBERON:0005290,2.50e-20,2;UBERON:0010096,2.50e-20,2;UBERON:0004733,2.24e-15,6;UBERON:0004732,2.24e-15,6;UBERON:0002028,2.24e-15,6;UBERON:0007277,2.24e-15,6;UBERON:0001851,2.90e-11,1;UBERON:0005889,2.90e-11,1;UBERON:0002259,3.65e-11,1;UBERON:0002314,3.65e-11,1;UBERON:0004061,3.65e-11,1;UBERON:0006777,3.65e-11,1;UBERON:0005882,3.65e-11,1;UBERON:0002616,2.84e-10,46;UBERON:0000955,4.74e-10,47;UBERON:0006238,4.74e-10,47;UBERON:0001049,4.60e-09,52;UBERON:0005068,4.60e-09,52;UBERON:0006241,4.60e-09,52;UBERON:0007135,4.60e-09,52;UBERON:0000073,1.02e-08,54;UBERON:0003076,5.25e-08,12;UBERON:0003057,5.25e-08,12;UBERON:0002346,2.57e-07,64;UBERON:0003075,2.57e-07,64;UBERON:0007284,2.57e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.420649922702764,0,0.883474163806454,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,1.8850203613211,0,0,0,0,1.49790639404823,1.37250180845588,0.502617408451458,0.521472960576829,1.53429274398198,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,3.2929475961371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,1.19707462020309,0.170733605754134,0,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0,0,0.532427418478012,0,0.145346416632329,0,0.169229215783353,0.548783918618318,0,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0,0 | |||
|short_description=p1@Mir9-1 | |||
}} |
Revision as of 03:44, 4 August 2015
Short description: | p1@Mir9-1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mir9-1_5end |
Coexpression cluster: | MCL_coexpression_mm9:580 |
Association with transcript: | 74bp_to_NR_029817, uc012cro.1_5end |
EntrezGene: | 387133 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.50e-20 | 2 |
brainstem | 2.50e-20 | 2 |
myelencephalon | 2.50e-20 | 2 |
future myelencephalon | 2.50e-20 | 2 |
segmental subdivision of hindbrain | 2.24e-15 | 6 |
segmental subdivision of nervous system | 2.24e-15 | 6 |
hindbrain | 2.24e-15 | 6 |
presumptive hindbrain | 2.24e-15 | 6 |
cortex | 2.90e-11 | 1 |
zygote cortex | 2.90e-11 | 1 |
corpora quadrigemina | 3.65e-11 | 1 |
midbrain tectum | 3.65e-11 | 1 |
neural tube mantle layer | 3.65e-11 | 1 |
tectal plate | 3.65e-11 | 1 |
neural tube alar plate | 3.65e-11 | 1 |
regional part of brain | 2.84e-10 | 46 |
brain | 4.74e-10 | 47 |
future brain | 4.74e-10 | 47 |
neural tube | 4.60e-09 | 52 |
neural rod | 4.60e-09 | 52 |
future spinal cord | 4.60e-09 | 52 |
neural keel | 4.60e-09 | 52 |
regional part of nervous system | 1.02e-08 | 54 |
posterior neural tube | 5.25e-08 | 12 |
chordal neural plate | 5.25e-08 | 12 |
neurectoderm | 2.57e-07 | 64 |
neural plate | 2.57e-07 | 64 |
presumptive neural plate | 2.57e-07 | 64 |