FFCP PHASE1:Mm9::chr11:87570133..87570137,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=387160|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=-228bp_to_NR_029555,uc011yca.1_5end|description=CAGE_peak_4_at_Mir142_5end|id=chr11:87570133..87570137,+|ontology_enrichment_celltype=CL:0000838!2.76e-07!12|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.05e-23!29;UBERON:0002193!7.05e-20!48;UBERON:0002390!2.64e-18!45;UBERON:0003061!2.64e-18!45;UBERON:0002405!3.12e-18!70;UBERON:0005057!4.05e-18!51;UBERON:0002370!1.34e-15!23;UBERON:0000974!1.34e-15!23;UBERON:0004807!1.34e-15!23;UBERON:0005058!1.34e-15!23;UBERON:0003351!1.34e-15!23;UBERON:0009113!1.34e-15!23;UBERON:0003295!1.34e-15!23;UBERON:0009722!1.34e-15!23;UBERON:0005562!1.34e-15!23;UBERON:0007690!1.34e-15!23;UBERON:0006562!9.53e-15!24;UBERON:0003408!9.53e-15!24;UBERON:0001557!9.53e-15!24;UBERON:0001042!9.53e-15!24;UBERON:0008814!9.53e-15!24;UBERON:0009145!9.53e-15!24;UBERON:0000072!1.40e-12!27;UBERON:0000065!7.04e-11!41;UBERON:0001004!1.74e-10!42;UBERON:0003081!1.84e-10!88;UBERON:0001041!3.81e-10!92;UBERON:0000077!4.33e-10!97;UBERON:0005911!6.26e-09!69;UBERON:0003929!6.58e-09!55;UBERON:0002106!6.77e-09!6;UBERON:0004457!6.77e-09!6;UBERON:0000042!6.77e-09!6;UBERON:0004854!6.77e-09!6;UBERON:0009034!6.77e-09!6;UBERON:0002095!6.77e-09!6;UBERON:0004782!6.77e-09!6;UBERON:0003281!6.77e-09!6;UBERON:0009664!6.77e-09!6;UBERON:0002296!6.77e-09!6;UBERON:0005602!6.77e-09!6;UBERON:0001179!6.77e-09!6;UBERON:0006293!6.77e-09!6;UBERON:0000063!1.16e-08!35;UBERON:0002368!1.13e-07!60;UBERON:0002530!1.97e-07!65;UBERON:0003104!5.72e-07!131;UBERON:0009142!5.72e-07!131;UBERON:0001048!6.94e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.90e-14,23;UBERON:0000974,4.90e-14,23;UBERON:0004807,4.90e-14,23;UBERON:0005058,4.90e-14,23;UBERON:0003351,4.90e-14,23;UBERON:0009113,4.90e-14,23;UBERON:0003295,4.90e-14,23;UBERON:0009722,4.90e-14,23;UBERON:0005562,4.90e-14,23;UBERON:0007690,4.90e-14,23;UBERON:0000029,1.55e-13,1;UBERON:0001097,1.55e-13,1;UBERON:0003968,1.55e-13,1;UBERON:0001467,1.55e-13,1;UBERON:0006562,1.82e-13,24;UBERON:0003408,1.82e-13,24;UBERON:0001557,1.82e-13,24;UBERON:0001042,1.82e-13,24;UBERON:0008814,1.82e-13,24;UBERON:0009145,1.82e-13,24;UBERON:0000072,5.22e-12,27;UBERON:0004177,3.34e-11,29;UBERON:0005057,3.34e-11,29;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0000077,2.49e-09,35;UBERON:0007811,4.44e-09,36;UBERON:0000065,5.31e-08,41;UBERON:0001004,8.13e-08,42;UBERON:0000153,1.22e-07,43;UBERON:0002390,2.61e-07,45;UBERON:0003061,2.61e-07,45|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0,0.171217968225505,0.478632953972018,0,0.611942816932982,0.333109761815663,0.404950534779652,0,0.315462165358238,0.411343300817216,0,0,0.297872853602656,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.441683036920787,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.51968329191118,0.537080087002444,0.993406773906324,0.841368146639782,0.886137163047463,1.61546319917036,0.914481679859998,1.31074040677893,1.26695244961678,1.82802499116626,1.05189211963412,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p4@Mir142}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:387160 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-228bp_to_NR_029555,uc011yca.1_5end | |||
|cluster_id=chr11:87570133..87570137,+ | |||
|description=CAGE_peak_4_at_Mir142_5end | |||
|id=chr11:87570133..87570137,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.76e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.05e-23!29;UBERON:0002193!7.05e-20!48;UBERON:0002390!2.64e-18!45;UBERON:0003061!2.64e-18!45;UBERON:0002405!3.12e-18!70;UBERON:0005057!4.05e-18!51;UBERON:0002370!1.34e-15!23;UBERON:0000974!1.34e-15!23;UBERON:0004807!1.34e-15!23;UBERON:0005058!1.34e-15!23;UBERON:0003351!1.34e-15!23;UBERON:0009113!1.34e-15!23;UBERON:0003295!1.34e-15!23;UBERON:0009722!1.34e-15!23;UBERON:0005562!1.34e-15!23;UBERON:0007690!1.34e-15!23;UBERON:0006562!9.53e-15!24;UBERON:0003408!9.53e-15!24;UBERON:0001557!9.53e-15!24;UBERON:0001042!9.53e-15!24;UBERON:0008814!9.53e-15!24;UBERON:0009145!9.53e-15!24;UBERON:0000072!1.40e-12!27;UBERON:0000065!7.04e-11!41;UBERON:0001004!1.74e-10!42;UBERON:0003081!1.84e-10!88;UBERON:0001041!3.81e-10!92;UBERON:0000077!4.33e-10!97;UBERON:0005911!6.26e-09!69;UBERON:0003929!6.58e-09!55;UBERON:0002106!6.77e-09!6;UBERON:0004457!6.77e-09!6;UBERON:0000042!6.77e-09!6;UBERON:0004854!6.77e-09!6;UBERON:0009034!6.77e-09!6;UBERON:0002095!6.77e-09!6;UBERON:0004782!6.77e-09!6;UBERON:0003281!6.77e-09!6;UBERON:0009664!6.77e-09!6;UBERON:0002296!6.77e-09!6;UBERON:0005602!6.77e-09!6;UBERON:0001179!6.77e-09!6;UBERON:0006293!6.77e-09!6;UBERON:0000063!1.16e-08!35;UBERON:0002368!1.13e-07!60;UBERON:0002530!1.97e-07!65;UBERON:0003104!5.72e-07!131;UBERON:0009142!5.72e-07!131;UBERON:0001048!6.94e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.90e-14,23;UBERON:0000974,4.90e-14,23;UBERON:0004807,4.90e-14,23;UBERON:0005058,4.90e-14,23;UBERON:0003351,4.90e-14,23;UBERON:0009113,4.90e-14,23;UBERON:0003295,4.90e-14,23;UBERON:0009722,4.90e-14,23;UBERON:0005562,4.90e-14,23;UBERON:0007690,4.90e-14,23;UBERON:0000029,1.55e-13,1;UBERON:0001097,1.55e-13,1;UBERON:0003968,1.55e-13,1;UBERON:0001467,1.55e-13,1;UBERON:0006562,1.82e-13,24;UBERON:0003408,1.82e-13,24;UBERON:0001557,1.82e-13,24;UBERON:0001042,1.82e-13,24;UBERON:0008814,1.82e-13,24;UBERON:0009145,1.82e-13,24;UBERON:0000072,5.22e-12,27;UBERON:0004177,3.34e-11,29;UBERON:0005057,3.34e-11,29;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0000077,2.49e-09,35;UBERON:0007811,4.44e-09,36;UBERON:0000065,5.31e-08,41;UBERON:0001004,8.13e-08,42;UBERON:0000153,1.22e-07,43;UBERON:0002390,2.61e-07,45;UBERON:0003061,2.61e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0,0.171217968225505,0.478632953972018,0,0.611942816932982,0.333109761815663,0.404950534779652,0,0.315462165358238,0.411343300817216,0,0,0.297872853602656,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.441683036920787,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0.449724224769707,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.51968329191118,0.537080087002444,0.993406773906324,0.841368146639782,0.886137163047463,1.61546319917036,0.914481679859998,1.31074040677893,1.26695244961678,1.82802499116626,1.05189211963412,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p4@Mir142 | |||
}} |
Revision as of 06:53, 4 August 2015
Short description: | p4@Mir142 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mir142_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -228bp_to_NR_029555, uc011yca.1_5end |
EntrezGene: | 387160 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.06e-13 | 1 |
B cell | 2.06e-13 | 1 |
pro-B cell | 2.06e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.90e-14 | 23 |
neck | 4.90e-14 | 23 |
respiratory system epithelium | 4.90e-14 | 23 |
hemolymphoid system gland | 4.90e-14 | 23 |
pharyngeal epithelium | 4.90e-14 | 23 |
thymic region | 4.90e-14 | 23 |
pharyngeal gland | 4.90e-14 | 23 |
entire pharyngeal arch endoderm | 4.90e-14 | 23 |
thymus primordium | 4.90e-14 | 23 |
early pharyngeal endoderm | 4.90e-14 | 23 |
lymph node | 1.55e-13 | 1 |
axillary lymph node | 1.55e-13 | 1 |
peripheral lymph node | 1.55e-13 | 1 |
shoulder | 1.55e-13 | 1 |
pharynx | 1.82e-13 | 24 |
gland of gut | 1.82e-13 | 24 |
upper respiratory tract | 1.82e-13 | 24 |
chordate pharynx | 1.82e-13 | 24 |
pharyngeal arch system | 1.82e-13 | 24 |
pharyngeal region of foregut | 1.82e-13 | 24 |
segment of respiratory tract | 5.22e-12 | 27 |
hemopoietic organ | 3.34e-11 | 29 |
immune organ | 3.34e-11 | 29 |
hemolymphoid system | 1.24e-09 | 48 |
immune system | 1.24e-09 | 48 |
mixed endoderm/mesoderm-derived structure | 2.49e-09 | 35 |
craniocervical region | 4.44e-09 | 36 |
respiratory tract | 5.31e-08 | 41 |
respiratory system | 8.13e-08 | 42 |
anterior region of body | 1.22e-07 | 43 |
hematopoietic system | 2.61e-07 | 45 |
blood island | 2.61e-07 | 45 |