FFCP PHASE1:Mm9::chr5:31916393..31916403,+: Difference between revisions
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{{FFCP|EntrezGene=66845|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=7bp_to_ENSMUST00000155497_5end|description=CAGE_peak_3_at_Mrpl33_5end|id=chr5:31916393..31916403,+|ontology_enrichment_celltype=CL:0000219!3.14e-11!54;CL:0000988!8.38e-09!32;CL:0002032!8.38e-09!32;CL:0000037!8.38e-09!32;CL:0000566!8.38e-09!32;CL:0000837!8.38e-09!32;CL:0000144!1.38e-08!121;CL:0000012!1.38e-08!121;CL:0002320!1.80e-08!46;CL:0000134!1.80e-08!46;CL:0000063!3.26e-08!66;CL:0002371!9.39e-08!118|ontology_enrichment_celltype_v019_2=CL:0000219,7.01e-13,54;CL:0000988,4.77e-10,32;CL:0002032,4.77e-10,32;CL:0000037,4.77e-10,32;CL:0000837,4.77e-10,32;CL:0002320,8.60e-10,46;CL:0000134,8.60e-10,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.23e-10!88;UBERON:0002384!1.80e-08!46;UBERON:0000926!2.20e-08!193;UBERON:0004120!2.20e-08!193;UBERON:0006603!2.20e-08!193;UBERON:0002204!3.15e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.11e-13,120;UBERON:0004120,4.11e-13,120;UBERON:0006603,4.11e-13,120;UBERON:0002384,8.60e-10,46;UBERON:0003081,6.90e-09,87;UBERON:0002204,3.49e-07,32|phase1_expression=0.960893082628764,2.79180326111489,3.18499467572675,0,0.500895729946347,0.503637815735669,0.467225281191051,1.29123323441576,7.03943610758334,9.36258105287974,4.10923123741212,3.11111420081812,3.42401459862411,2.71003247498892,0.666219523631325,1.21485160433896,3.49780939064073,3.47008381894061,2.4680598049033,3.39511721438424,0.765389611359628,3.3758923408301,6.26879493933445,3.19984845586813,3.21172993494038,2.8711598205751,1.7230479846363,0.646413698057667,0.570070258369122,1.26015064879965,1.99557459589774,2.54012269383853,1.84519436275371,0,0.288851619751275,1.32987716286794,0.612508068787107,30.5528090437943,41.4107732597614,34.0290433582969,61.1760747552255,47.1301384621327,37.3842971833988,6.04304726282771,6.79225439170748,13.9495531642878,1.56478268869608,4.14247797122848,6.81027166476863,5.05517737593137,3.07970127575798,1.43752564364972,2.51673909086605,3.62681071005672,3.02484419228218,3.08711323243136,2.0057340795713,2.06268836910977,0.202316460859598,0,0.633831403506179,5.08266798103698,0,2.2497492932035,0.988866362566974,1.4209602298922,4.49400165777607,6.53171119046643,0.518448061542388,0.945041568321835,0.420649922702764,0.285650984403804,1.54607978666129,0.489963196859816,0.479227355091182,0.919218786610021,0,0.127687338085188,0.614426133024974,0,0.457438218012048,0.52091337055676,0.279182999001381,1.68828783009504,0.61119299110724,0.294628585473668,1.13897344639282,0.745597783301202,5.60373830665562,6.87701196971748,2.6087803983151,0,1.3599426674155,0.539703191637817,1.29955283489534,1.34408066129201,1.12355536105401,3.40860645156115,5.19572009205738,3.88673531961374,0.422530259330042,6.41632387071589,12.7402619853323,35.5533351576666,7.36069539438128,6.84071636782766,5.05524445014783,1.1418387971906,2.58937883647172,3.71105347662062,1.90833859442749,1.82679286987285,3.92046345335299,3.61734337326294,2.70454026412121,4.77533047052767,1.73036477414062,1.15679485535929,7.96149496754887,2.42650274921114,1.98757366614354,2.42437626567611,0,0,0.41889341362691,0.255457055208591,11.0229914545447,20.9965955847693,15.2484272487678,0.299581278809645,0.457500602818626,0.125654352112864,0,0.255715457330331,0.20778804455956,0.324482526135515,1.83310854930569,2.86136032403214,4.80173241023982,0.420883711772948,0.520481771850815,0.229902104433473,0.900310649026746,0.452114453507145,0.884474488967262,0.2562274405697,0.468508622798644,0,0.215567992932842,0.756424320671277,1.58356011747554,0.657587197282725,0.834141747676794,1.0447564995665,1.02891068203972,0.796137067273973,26.6841011179029,22.6466158260949,16.4814829649444,0.621377317606506,1.87620847984877,1.80062061461015,1.18372367792605,0.787056926989615,1.07986979021165,2.09280550275367,2.41446061259657,2.33530684734339,1.48103864922132,4.10418660197738,3.24275238183423,2.19299981137998,3.51280184465681,3.48936688776967,0.420579897128254,0.308713837137853,0,0.528901133327089,1.2797295032114,0.928946687441754,0.515469845288373,0.403367049246685,0.22237804384487,1.14135375667535,0.474529061544512,0.658795818896044,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,1.32767530667157,1.94222471436539,3.38123207019241,1.62921062276251,2.71533482034676,2.59502533594179,1.39120381673366,1.47610147979602,1.255989822731,1.23397163921801,1.48226313543574,0.500535317148282,0.589676985339609,1.12431056192427,1.21716072833102,0,0.25462585178142,1.15078454980324,0.972811360650212,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,1.84753190166605,0.947457058852424,0.651859905768103,1.01847051465113,0.938760993154008,1.00503754465089,0.952174563544055,1.36593553500459,1.10344600874334,1.10732344824387,0.797273843287435,1.63863314715738,1.89953480052485,0.867894351489069,1.50791283939272,0,0,0,0.1605505899877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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66845 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENSMUST00000155497_5end | |||
|cluster_id=chr5:31916393..31916403,+ | |||
|description=CAGE_peak_3_at_Mrpl33_5end | |||
|id=chr5:31916393..31916403,+ | |||
|ontology_enrichment_celltype=CL:0000219!3.14e-11!54;CL:0000988!8.38e-09!32;CL:0002032!8.38e-09!32;CL:0000037!8.38e-09!32;CL:0000566!8.38e-09!32;CL:0000837!8.38e-09!32;CL:0000144!1.38e-08!121;CL:0000012!1.38e-08!121;CL:0002320!1.80e-08!46;CL:0000134!1.80e-08!46;CL:0000063!3.26e-08!66;CL:0002371!9.39e-08!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.01e-13,54;CL:0000988,4.77e-10,32;CL:0002032,4.77e-10,32;CL:0000037,4.77e-10,32;CL:0000837,4.77e-10,32;CL:0002320,8.60e-10,46;CL:0000134,8.60e-10,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.23e-10!88;UBERON:0002384!1.80e-08!46;UBERON:0000926!2.20e-08!193;UBERON:0004120!2.20e-08!193;UBERON:0006603!2.20e-08!193;UBERON:0002204!3.15e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.11e-13,120;UBERON:0004120,4.11e-13,120;UBERON:0006603,4.11e-13,120;UBERON:0002384,8.60e-10,46;UBERON:0003081,6.90e-09,87;UBERON:0002204,3.49e-07,32 | |||
|phase1_expression=0.960893082628764,2.79180326111489,3.18499467572675,0,0.500895729946347,0.503637815735669,0.467225281191051,1.29123323441576,7.03943610758334,9.36258105287974,4.10923123741212,3.11111420081812,3.42401459862411,2.71003247498892,0.666219523631325,1.21485160433896,3.49780939064073,3.47008381894061,2.4680598049033,3.39511721438424,0.765389611359628,3.3758923408301,6.26879493933445,3.19984845586813,3.21172993494038,2.8711598205751,1.7230479846363,0.646413698057667,0.570070258369122,1.26015064879965,1.99557459589774,2.54012269383853,1.84519436275371,0,0.288851619751275,1.32987716286794,0.612508068787107,30.5528090437943,41.4107732597614,34.0290433582969,61.1760747552255,47.1301384621327,37.3842971833988,6.04304726282771,6.79225439170748,13.9495531642878,1.56478268869608,4.14247797122848,6.81027166476863,5.05517737593137,3.07970127575798,1.43752564364972,2.51673909086605,3.62681071005672,3.02484419228218,3.08711323243136,2.0057340795713,2.06268836910977,0.202316460859598,0,0.633831403506179,5.08266798103698,0,2.2497492932035,0.988866362566974,1.4209602298922,4.49400165777607,6.53171119046643,0.518448061542388,0.945041568321835,0.420649922702764,0.285650984403804,1.54607978666129,0.489963196859816,0.479227355091182,0.919218786610021,0,0.127687338085188,0.614426133024974,0,0.457438218012048,0.52091337055676,0.279182999001381,1.68828783009504,0.61119299110724,0.294628585473668,1.13897344639282,0.745597783301202,5.60373830665562,6.87701196971748,2.6087803983151,0,1.3599426674155,0.539703191637817,1.29955283489534,1.34408066129201,1.12355536105401,3.40860645156115,5.19572009205738,3.88673531961374,0.422530259330042,6.41632387071589,12.7402619853323,35.5533351576666,7.36069539438128,6.84071636782766,5.05524445014783,1.1418387971906,2.58937883647172,3.71105347662062,1.90833859442749,1.82679286987285,3.92046345335299,3.61734337326294,2.70454026412121,4.77533047052767,1.73036477414062,1.15679485535929,7.96149496754887,2.42650274921114,1.98757366614354,2.42437626567611,0,0,0.41889341362691,0.255457055208591,11.0229914545447,20.9965955847693,15.2484272487678,0.299581278809645,0.457500602818626,0.125654352112864,0,0.255715457330331,0.20778804455956,0.324482526135515,1.83310854930569,2.86136032403214,4.80173241023982,0.420883711772948,0.520481771850815,0.229902104433473,0.900310649026746,0.452114453507145,0.884474488967262,0.2562274405697,0.468508622798644,0,0.215567992932842,0.756424320671277,1.58356011747554,0.657587197282725,0.834141747676794,1.0447564995665,1.02891068203972,0.796137067273973,26.6841011179029,22.6466158260949,16.4814829649444,0.621377317606506,1.87620847984877,1.80062061461015,1.18372367792605,0.787056926989615,1.07986979021165,2.09280550275367,2.41446061259657,2.33530684734339,1.48103864922132,4.10418660197738,3.24275238183423,2.19299981137998,3.51280184465681,3.48936688776967,0.420579897128254,0.308713837137853,0,0.528901133327089,1.2797295032114,0.928946687441754,0.515469845288373,0.403367049246685,0.22237804384487,1.14135375667535,0.474529061544512,0.658795818896044,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,1.32767530667157,1.94222471436539,3.38123207019241,1.62921062276251,2.71533482034676,2.59502533594179,1.39120381673366,1.47610147979602,1.255989822731,1.23397163921801,1.48226313543574,0.500535317148282,0.589676985339609,1.12431056192427,1.21716072833102,0,0.25462585178142,1.15078454980324,0.972811360650212,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,1.84753190166605,0.947457058852424,0.651859905768103,1.01847051465113,0.938760993154008,1.00503754465089,0.952174563544055,1.36593553500459,1.10344600874334,1.10732344824387,0.797273843287435,1.63863314715738,1.89953480052485,0.867894351489069,1.50791283939272,0,0,0,0.160550589987792,0,5.08198330667694,0.757412781613119,2.52406575533005,1.95219372148319,1.50796378412959,0.955875191810208,1.33679204449436,0.849229592366497,2.02405350837447,2.04579100537918,2.76701444562566,0.321321316421807,2.2710413633323,1.24645922567079,2.11753047159649,1.81467135269789,0,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0,1.29214146584111,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.776152102696527,1.50035924522115,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,2.11204537257339,4.87213762986786,0.220528398054962,1.15420377059036,0.807322133479528,1.26657142349127,0.835606408021955,0.820704498725306,0.291480836629851,0.370850604021019,1.87957968877638,3.30218988741156,3.1483069652851,1.31857919903284,0.956859594047176,0.915112692826091,3.39956859987711,2.51912614182584,3.31679937130617,0,0.474503990371703,1.21991680276109,1.08005340821801,1.46361807210128,0.87345025498471,0.404593039154462,1.32245529160537,1.30877970992015,0.518459893167171,1.86401793926078,1.69107881605257,1.34564891439581,1.48912641411388,0.972255941720238,1.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| |||
|short_description=p3@Mrpl33 | |||
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Revision as of 07:19, 4 August 2015
Short description: | p3@Mrpl33 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mrpl33_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 7bp_to_ENSMUST00000155497_5end |
EntrezGene: | 66845 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 7.01e-13 | 54 |
hematopoietic cell | 4.77e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.77e-10 | 32 |
hematopoietic stem cell | 4.77e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.77e-10 | 32 |
connective tissue cell | 8.60e-10 | 46 |
mesenchymal cell | 8.60e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.11e-13 | 120 |
mesoderm-derived structure | 4.11e-13 | 120 |
presumptive mesoderm | 4.11e-13 | 120 |
connective tissue | 8.60e-10 | 46 |
lateral plate mesoderm | 6.90e-09 | 87 |
musculoskeletal system | 3.49e-07 | 32 |