FFCP PHASE1:Mm9::chr10:3366142..3366151,+: Difference between revisions
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{{FFCP|EntrezGene=320495|HGNC=|MCL_coexpression_id=2554|UniProt=Q5DU31|association_with_transcript=-13bp_to_ENSMUST00000105617_5end|description=CAGE_peak_5_at_Ipcef1_5end|id=chr10:3366142..3366151,+|ontology_enrichment_celltype=CL:0000791!1.56e-09!9;CL:0000789!1.56e-09!9;CL:0002420!1.56e-09!9;CL:0002419!1.56e-09!9;CL:0000790!1.56e-09!9;CL:0000084!7.02e-09!11;CL:0000827!7.02e-09!11;CL:0000624!1.56e-08!8;CL:0000838!7.90e-08!12;CL:0000542!5.99e-07!13;CL:0000051!5.99e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,3.23e-24,9;CL:0000789,3.23e-24,9;CL:0002420,3.23e-24,9;CL:0002419,3.23e-24,9;CL:0000790,3.23e-24,9;CL:0000624,9.68e-21,8;CL:0000084,1.32e-19,11;CL:0000827,1.32e-19,11;CL:0000838,7.11e-18,12;CL:0000542,2.08e-16,13;CL:0000051,2.08e-16,13;CL:0000893,2.00e-14,6;CL:0002489,2.00e-14,6;CL:0000898,2.00e-14,6;CL:0000809,2.00e-14,6;CL:0000810,2.00e-14,6;CL:0000895,2.00e-14,6;CL:0000808,2.00e-14,6;CL:0000894,2.00e-14,6;CL:0000806,2.00e-14,6;CL:0000807,2.00e-14,6;CL:0000805,2.00e-14,6;CL:0002425,2.00e-14,6;CL:0002436,2.00e-14,6;CL:0002427,2.00e-14,6;CL:0002428,2.00e-14,6;CL:0002429,2.00e-14,6;CL:0002433,2.00e-14,6;CL:0002431,2.00e-14,6;CL:0002432,2.00e-14,6;CL:0000738,2.86e-12,17;CL:0002087,2.86e-12,17;CL:0002031,5.83e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!4.97e-23!86;UBERON:0000153!1.88e-20!94;UBERON:0002020!1.27e-14!34;UBERON:0003056!4.91e-13!49;UBERON:0002346!7.05e-13!71;UBERON:0003075!7.05e-13!71;UBERON:0007284!7.05e-13!71;UBERON:0000033!8.27e-13!63;UBERON:0001049!9.18e-13!52;UBERON:0005068!9.18e-13!52;UBERON:0006241!9.18e-13!52;UBERON:0007135!9.18e-13!52;UBERON:0002791!1.04e-11!29;UBERON:0003528!1.04e-11!29;UBERON:0001893!1.04e-11!29;UBERON:0000955!1.50e-11!50;UBERON:0006238!1.50e-11!50;UBERON:0000064!4.14e-11!99;UBERON:0002616!8.55e-11!49;UBERON:0002370!2.27e-10!23;UBERON:0000974!2.27e-10!23;UBERON:0004807!2.27e-10!23;UBERON:0005058!2.27e-10!23;UBERON:0003351!2.27e-10!23;UBERON:0009113!2.27e-10!23;UBERON:0003295!2.27e-10!23;UBERON:0009722!2.27e-10!23;UBERON:0005562!2.27e-10!23;UBERON:0007690!2.27e-10!23;UBERON:0002021!3.28e-10!10;UBERON:0000411!3.28e-10!10;UBERON:0001950!3.28e-10!10;UBERON:0003080!5.09e-10!40;UBERON:0002780!9.05e-10!39;UBERON:0001890!9.05e-10!39;UBERON:0006240!9.05e-10!39;UBERON:0006562!1.18e-09!24;UBERON:0003408!1.18e-09!24;UBERON:0001557!1.18e-09!24;UBERON:0001042!1.18e-09!24;UBERON:0008814!1.18e-09!24;UBERON:0009145!1.18e-09!24;UBERON:0000956!1.97e-09!21;UBERON:0001869!1.97e-09!21;UBERON:0000203!1.97e-09!21;UBERON:0004177!1.43e-08!29;UBERON:0000063!2.94e-08!35;UBERON:0001017!3.75e-08!73;UBERON:0005743!3.75e-08!73;UBERON:0000072!7.47e-08!27;UBERON:0000073!1.29e-07!75;UBERON:0001016!1.29e-07!75;UBERON:0002619!1.89e-07!17;UBERON:0004121!3.40e-07!102;UBERON:0000924!3.40e-07!102;UBERON:0006601!3.40e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.36e-27,10;UBERON:0000411,7.36e-27,10;UBERON:0001950,7.36e-27,10;UBERON:0002619,3.27e-15,17;UBERON:0000956,7.60e-15,21;UBERON:0001869,7.60e-15,21;UBERON:0000203,7.60e-15,21;UBERON:0002020,2.54e-10,34;UBERON:0003528,2.82e-10,29;UBERON:0002791,2.82e-10,29;UBERON:0001893,2.82e-10,29;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0001049,7.39e-09,52;UBERON:0005068,7.39e-09,52;UBERON:0006241,7.39e-09,52;UBERON:0007135,7.39e-09,52;UBERON:0002616,9.68e-09,46;UBERON:0000073,1.94e-08,54;UBERON:0002780,3.32e-07,39;UBERON:0001890,3.32e-07,39;UBERON:0006240,3.32e-07,39;UBERON:0003080,5.54e-07,40;UBERON:0001017,9.65e-07,73;UBERON:0002346,9.65e-07,64;UBERON:0003075,9.65e-07,64;UBERON:0007284,9.65e-07,64|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,1.12630977721333,1.17032263160997,3.93801326918661,0.8774937489487,5.30722262786738,3.84649770643589,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0,0.680346321208558,0.595745707205312,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,6.38578218370682,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.571301968807607,0.220868540951614,0.367472397644862,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.30559649555362,1.47314292736834,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.36619248741323,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,2.92780797011547,5.86450779077674,0.255457055208591,0.239630249011841,0,0,0.149790639404823,0.457500602818626,0.376963056338593,2.25971616249959,1.02286182932132,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0.631325567659422,0,0.459804208866946,0,0.90422890701429,0.748401490664606,0.640568601424249,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320495 | |||
|HGNC= | |||
|MCL_coexpression_id=2554 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5DU31 | |||
|association_with_transcript=-13bp_to_ENSMUST00000105617_5end | |||
|cluster_id=chr10:3366142..3366151,+ | |||
|description=CAGE_peak_5_at_Ipcef1_5end | |||
|id=chr10:3366142..3366151,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.56e-09!9;CL:0000789!1.56e-09!9;CL:0002420!1.56e-09!9;CL:0002419!1.56e-09!9;CL:0000790!1.56e-09!9;CL:0000084!7.02e-09!11;CL:0000827!7.02e-09!11;CL:0000624!1.56e-08!8;CL:0000838!7.90e-08!12;CL:0000542!5.99e-07!13;CL:0000051!5.99e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.23e-24,9;CL:0000789,3.23e-24,9;CL:0002420,3.23e-24,9;CL:0002419,3.23e-24,9;CL:0000790,3.23e-24,9;CL:0000624,9.68e-21,8;CL:0000084,1.32e-19,11;CL:0000827,1.32e-19,11;CL:0000838,7.11e-18,12;CL:0000542,2.08e-16,13;CL:0000051,2.08e-16,13;CL:0000893,2.00e-14,6;CL:0002489,2.00e-14,6;CL:0000898,2.00e-14,6;CL:0000809,2.00e-14,6;CL:0000810,2.00e-14,6;CL:0000895,2.00e-14,6;CL:0000808,2.00e-14,6;CL:0000894,2.00e-14,6;CL:0000806,2.00e-14,6;CL:0000807,2.00e-14,6;CL:0000805,2.00e-14,6;CL:0002425,2.00e-14,6;CL:0002436,2.00e-14,6;CL:0002427,2.00e-14,6;CL:0002428,2.00e-14,6;CL:0002429,2.00e-14,6;CL:0002433,2.00e-14,6;CL:0002431,2.00e-14,6;CL:0002432,2.00e-14,6;CL:0000738,2.86e-12,17;CL:0002087,2.86e-12,17;CL:0002031,5.83e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.97e-23!86;UBERON:0000153!1.88e-20!94;UBERON:0002020!1.27e-14!34;UBERON:0003056!4.91e-13!49;UBERON:0002346!7.05e-13!71;UBERON:0003075!7.05e-13!71;UBERON:0007284!7.05e-13!71;UBERON:0000033!8.27e-13!63;UBERON:0001049!9.18e-13!52;UBERON:0005068!9.18e-13!52;UBERON:0006241!9.18e-13!52;UBERON:0007135!9.18e-13!52;UBERON:0002791!1.04e-11!29;UBERON:0003528!1.04e-11!29;UBERON:0001893!1.04e-11!29;UBERON:0000955!1.50e-11!50;UBERON:0006238!1.50e-11!50;UBERON:0000064!4.14e-11!99;UBERON:0002616!8.55e-11!49;UBERON:0002370!2.27e-10!23;UBERON:0000974!2.27e-10!23;UBERON:0004807!2.27e-10!23;UBERON:0005058!2.27e-10!23;UBERON:0003351!2.27e-10!23;UBERON:0009113!2.27e-10!23;UBERON:0003295!2.27e-10!23;UBERON:0009722!2.27e-10!23;UBERON:0005562!2.27e-10!23;UBERON:0007690!2.27e-10!23;UBERON:0002021!3.28e-10!10;UBERON:0000411!3.28e-10!10;UBERON:0001950!3.28e-10!10;UBERON:0003080!5.09e-10!40;UBERON:0002780!9.05e-10!39;UBERON:0001890!9.05e-10!39;UBERON:0006240!9.05e-10!39;UBERON:0006562!1.18e-09!24;UBERON:0003408!1.18e-09!24;UBERON:0001557!1.18e-09!24;UBERON:0001042!1.18e-09!24;UBERON:0008814!1.18e-09!24;UBERON:0009145!1.18e-09!24;UBERON:0000956!1.97e-09!21;UBERON:0001869!1.97e-09!21;UBERON:0000203!1.97e-09!21;UBERON:0004177!1.43e-08!29;UBERON:0000063!2.94e-08!35;UBERON:0001017!3.75e-08!73;UBERON:0005743!3.75e-08!73;UBERON:0000072!7.47e-08!27;UBERON:0000073!1.29e-07!75;UBERON:0001016!1.29e-07!75;UBERON:0002619!1.89e-07!17;UBERON:0004121!3.40e-07!102;UBERON:0000924!3.40e-07!102;UBERON:0006601!3.40e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.36e-27,10;UBERON:0000411,7.36e-27,10;UBERON:0001950,7.36e-27,10;UBERON:0002619,3.27e-15,17;UBERON:0000956,7.60e-15,21;UBERON:0001869,7.60e-15,21;UBERON:0000203,7.60e-15,21;UBERON:0002020,2.54e-10,34;UBERON:0003528,2.82e-10,29;UBERON:0002791,2.82e-10,29;UBERON:0001893,2.82e-10,29;UBERON:0000955,3.09e-10,47;UBERON:0006238,3.09e-10,47;UBERON:0001049,7.39e-09,52;UBERON:0005068,7.39e-09,52;UBERON:0006241,7.39e-09,52;UBERON:0007135,7.39e-09,52;UBERON:0002616,9.68e-09,46;UBERON:0000073,1.94e-08,54;UBERON:0002780,3.32e-07,39;UBERON:0001890,3.32e-07,39;UBERON:0006240,3.32e-07,39;UBERON:0003080,5.54e-07,40;UBERON:0001017,9.65e-07,73;UBERON:0002346,9.65e-07,64;UBERON:0003075,9.65e-07,64;UBERON:0007284,9.65e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,1.12630977721333,1.17032263160997,3.93801326918661,0.8774937489487,5.30722262786738,3.84649770643589,0,0.202475267389826,0,0.788655413395594,0.548457734422955,0,0.680346321208558,0.595745707205312,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,6.38578218370682,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.571301968807607,0.220868540951614,0.367472397644862,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.30559649555362,1.47314292736834,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.36619248741323,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,2.92780797011547,5.86450779077674,0.255457055208591,0.239630249011841,0,0,0.149790639404823,0.457500602818626,0.376963056338593,2.25971616249959,1.02286182932132,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0.631325567659422,0,0.459804208866946,0,0.90422890701429,0.748401490664606,0.640568601424249,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0.457556346413045,0.169978429993855,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0,0,0.948033361884535,0,0.718976700153791,1.16928740680016,0.358053391334963,0.198681354781265,0.600977247599844,0.738447635872886,0.302899349844443,0.228620419965,0.403304740547362,0.584747284438515,0.962118416403295,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0,2.82375921308533,1.84130094602871,2.29158205375759,3.95262319390481,2.74033007908257,4.5323633843382,0.675022500231806,1.80128481289688,3.17199686288943,3.10656187051092,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.367687016900028,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0,0,0,0 | |||
|short_description=p5@Ipcef1 | |||
}} |
Revision as of 07:58, 4 August 2015
Short description: | p5@Ipcef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ipcef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2554 |
Association with transcript: | -13bp_to_ENSMUST00000105617_5end |
EntrezGene: | 320495 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.36e-27 | 10 |
visual cortex | 7.36e-27 | 10 |
neocortex | 7.36e-27 | 10 |
regional part of cerebral cortex | 3.27e-15 | 17 |
cerebral cortex | 7.60e-15 | 21 |
cerebral hemisphere | 7.60e-15 | 21 |
pallium | 7.60e-15 | 21 |
gray matter | 2.54e-10 | 34 |
brain grey matter | 2.82e-10 | 29 |
regional part of telencephalon | 2.82e-10 | 29 |
telencephalon | 2.82e-10 | 29 |
brain | 3.09e-10 | 47 |
future brain | 3.09e-10 | 47 |
neural tube | 7.39e-09 | 52 |
neural rod | 7.39e-09 | 52 |
future spinal cord | 7.39e-09 | 52 |
neural keel | 7.39e-09 | 52 |
regional part of brain | 9.68e-09 | 46 |
regional part of nervous system | 1.94e-08 | 54 |
regional part of forebrain | 3.32e-07 | 39 |
forebrain | 3.32e-07 | 39 |
future forebrain | 3.32e-07 | 39 |
anterior neural tube | 5.54e-07 | 40 |
central nervous system | 9.65e-07 | 73 |
neurectoderm | 9.65e-07 | 64 |
neural plate | 9.65e-07 | 64 |
presumptive neural plate | 9.65e-07 | 64 |