FFCP PHASE1:Mm9::chr11:94871558..94871590,+: Difference between revisions
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{{FFCP|EntrezGene=217125|HGNC=|MCL_coexpression_id=883|UniProt=B7ZC59|association_with_transcript=-4bp_to_ENSMUST00000124735_5end|description=CAGE_peak_5_at_Samd14_5end|id=chr11:94871558..94871590,+|ontology_enrichment_celltype=CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000540!1.38e-10!33;CL:0000047!1.38e-10!33;CL:0000031!1.38e-10!33;CL:0000404!1.38e-10!33;CL:0002319!3.22e-09!43;CL:0000221!4.17e-09!44;CL:0000133!4.17e-09!44;CL:0000393!6.75e-08!39;CL:0000211!6.75e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.86e-13,23;CL:0000337,6.86e-13,23;CL:0000540,2.28e-10,33;CL:0000047,2.28e-10,33;CL:0000031,2.28e-10,33;CL:0000404,2.28e-10,33;CL:0000393,1.06e-07,39;CL:0000211,1.06e-07,39;CL:0002319,1.16e-07,43;CL:0000221,1.41e-07,44;CL:0000133,1.41e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.12e-13!71;UBERON:0003075!3.12e-13!71;UBERON:0007284!3.12e-13!71;UBERON:0001017!1.70e-12!73;UBERON:0005743!1.70e-12!73;UBERON:0000073!5.40e-12!75;UBERON:0001016!5.40e-12!75;UBERON:0004121!1.05e-10!102;UBERON:0000924!1.05e-10!102;UBERON:0006601!1.05e-10!102;UBERON:0000033!1.44e-10!63;UBERON:0001049!1.47e-10!52;UBERON:0005068!1.47e-10!52;UBERON:0006241!1.47e-10!52;UBERON:0007135!1.47e-10!52;UBERON:0003056!2.39e-10!49;UBERON:0002616!1.49e-08!49;UBERON:0000955!1.80e-08!50;UBERON:0006238!1.80e-08!50;UBERON:0002020!8.80e-08!34;UBERON:0003080!2.53e-07!40;UBERON:0002780!4.77e-07!39;UBERON:0001890!4.77e-07!39;UBERON:0006240!4.77e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.33e-15,64;UBERON:0003075,1.33e-15,64;UBERON:0007284,1.33e-15,64;UBERON:0001017,4.22e-12,73;UBERON:0000073,4.95e-12,54;UBERON:0010371,6.41e-12,73;UBERON:0003056,9.78e-12,49;UBERON:0001049,1.24e-11,52;UBERON:0005068,1.24e-11,52;UBERON:0006241,1.24e-11,52;UBERON:0007135,1.24e-11,52;UBERON:0001016,3.53e-11,75;UBERON:0004121,2.46e-10,95;UBERON:0000924,2.46e-10,95;UBERON:0006601,2.46e-10,95;UBERON:0002020,3.61e-09,34;UBERON:0002616,5.49e-09,46;UBERON:0000955,6.81e-09,47;UBERON:0006238,6.81e-09,47;UBERON:0003080,2.55e-08,40;UBERON:0010314,3.45e-08,92;UBERON:0002780,5.21e-08,39;UBERON:0001890,5.21e-08,39;UBERON:0006240,5.21e-08,39|phase1_expression=3.04282809499109,0,0,0,0,0.839396359559449,0.467225281191051,0,0,0,0.171217968225505,0,0,0,12.9912807108108,24.0945568193893,34.9780939064073,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0,0,0.68822784320151,0,0,0.215471232685889,0,0,0.221730510655305,4.44521471421742,4.30545351309199,0,0,0.166234645358492,0,1.67412652294763,0,0.523523743973798,0,0,0,1.38486499773135,1.21652317463417,0.550640256485045,0.782391344348039,3.2703773457067,1.97717564461025,1.36100929351998,0.979904951377538,1.43752564364972,0,0,0,0,0.286533439938757,0,16.589949790487,19.5726662330652,18.3811107016792,0.338844532069132,0,0,0,0,0.898800331555214,3.45796474789399,9.43575472007147,12.9605700798423,10.9368979902719,6.85562362569129,10.1599528837742,9.92175473641128,12.172374819316,17.4651569455904,2.20231761998777,1.91531007127782,4.45458946443106,26.509143833769,17.7486028588675,21.3574481928272,2.23346399201105,3.37657566019008,5.04234217663473,17.3830865429464,8.96941589034349,19.3855423658313,0.454357159999104,0.68014404096107,0.289864488701678,0,0,0,0,0,0.702222100658759,1.36344258062446,0.259786004602869,0.35333957451034,1.26759077799012,0,2.54805239706646,0,0.216491041011214,0,0,0.5709193985953,0.517875767294343,0.148442139064825,2.77576522825817,3.95805121805784,1.84492397804847,1.20578112442098,1.05829836422134,0.125666591329675,0.494389935468748,0.289198713839823,16.8076004870476,1.61766849947409,2.87093973998512,5.81850303762267,0,6.14839673724249,7.95897485891129,0,0.718890747035522,0,0,4.04434726393021,3.20250421973039,10.9319286338192,3.30266208365325,1.02286182932132,2.90903262383384,2.75810147215188,3.36069900706044,3.35898820647251,0,1.47309299120532,7.54698569183682,5.0578462975364,8.64298223065676,6.0281927134286,5.57899293040888,7.04625461566674,6.65282244374075,4.65666067330228,3.88022387279116,3.9712276835242,4.22282697993477,3.5071317188412,4.17070873838397,0.696504333044333,1.4404749548556,1.79130840136644,0,0,0,2.07125772535502,3.04883877975425,0.540186184383045,1.18372367792605,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,2.10289948564127,9.46722433889417,0.330418782983798,0,3.19932375802851,4.18026009348789,2.83508414908605,1.4117846723634,0.667134131534611,1.52180500890047,0,0.164698954724011,0,0.397912944082302,0.58489226135736,0.898819408654221,0,0.199141273254367,1.13800740571849,2.28497025219458,2.25415471346161,2.44381593414377,1.55161989734101,1.19230893813542,0.758838445491087,0,0,0,0,21.8567088488083,15.7247196090562,12.8171404059367,20.0831520174618,10.8529721888588,6.87489799809833,7.76779571117189,7.13394997810156,3.84385978463314,2.87536413054709,1.48856379067401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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217125 | |||
|HGNC= | |||
|MCL_coexpression_id=883 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZC59 | |||
|association_with_transcript=-4bp_to_ENSMUST00000124735_5end | |||
|cluster_id=chr11:94871558..94871590,+ | |||
|description=CAGE_peak_5_at_Samd14_5end | |||
|id=chr11:94871558..94871590,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000540!1.38e-10!33;CL:0000047!1.38e-10!33;CL:0000031!1.38e-10!33;CL:0000404!1.38e-10!33;CL:0002319!3.22e-09!43;CL:0000221!4.17e-09!44;CL:0000133!4.17e-09!44;CL:0000393!6.75e-08!39;CL:0000211!6.75e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.86e-13,23;CL:0000337,6.86e-13,23;CL:0000540,2.28e-10,33;CL:0000047,2.28e-10,33;CL:0000031,2.28e-10,33;CL:0000404,2.28e-10,33;CL:0000393,1.06e-07,39;CL:0000211,1.06e-07,39;CL:0002319,1.16e-07,43;CL:0000221,1.41e-07,44;CL:0000133,1.41e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.12e-13!71;UBERON:0003075!3.12e-13!71;UBERON:0007284!3.12e-13!71;UBERON:0001017!1.70e-12!73;UBERON:0005743!1.70e-12!73;UBERON:0000073!5.40e-12!75;UBERON:0001016!5.40e-12!75;UBERON:0004121!1.05e-10!102;UBERON:0000924!1.05e-10!102;UBERON:0006601!1.05e-10!102;UBERON:0000033!1.44e-10!63;UBERON:0001049!1.47e-10!52;UBERON:0005068!1.47e-10!52;UBERON:0006241!1.47e-10!52;UBERON:0007135!1.47e-10!52;UBERON:0003056!2.39e-10!49;UBERON:0002616!1.49e-08!49;UBERON:0000955!1.80e-08!50;UBERON:0006238!1.80e-08!50;UBERON:0002020!8.80e-08!34;UBERON:0003080!2.53e-07!40;UBERON:0002780!4.77e-07!39;UBERON:0001890!4.77e-07!39;UBERON:0006240!4.77e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.33e-15,64;UBERON:0003075,1.33e-15,64;UBERON:0007284,1.33e-15,64;UBERON:0001017,4.22e-12,73;UBERON:0000073,4.95e-12,54;UBERON:0010371,6.41e-12,73;UBERON:0003056,9.78e-12,49;UBERON:0001049,1.24e-11,52;UBERON:0005068,1.24e-11,52;UBERON:0006241,1.24e-11,52;UBERON:0007135,1.24e-11,52;UBERON:0001016,3.53e-11,75;UBERON:0004121,2.46e-10,95;UBERON:0000924,2.46e-10,95;UBERON:0006601,2.46e-10,95;UBERON:0002020,3.61e-09,34;UBERON:0002616,5.49e-09,46;UBERON:0000955,6.81e-09,47;UBERON:0006238,6.81e-09,47;UBERON:0003080,2.55e-08,40;UBERON:0010314,3.45e-08,92;UBERON:0002780,5.21e-08,39;UBERON:0001890,5.21e-08,39;UBERON:0006240,5.21e-08,39 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0.839396359559449,0.467225281191051,0,0,0,0.171217968225505,0,0,0,12.9912807108108,24.0945568193893,34.9780939064073,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0,0,0.68822784320151,0,0,0.215471232685889,0,0,0.221730510655305,4.44521471421742,4.30545351309199,0,0,0.166234645358492,0,1.67412652294763,0,0.523523743973798,0,0,0,1.38486499773135,1.21652317463417,0.550640256485045,0.782391344348039,3.2703773457067,1.97717564461025,1.36100929351998,0.979904951377538,1.43752564364972,0,0,0,0,0.286533439938757,0,16.589949790487,19.5726662330652,18.3811107016792,0.338844532069132,0,0,0,0,0.898800331555214,3.45796474789399,9.43575472007147,12.9605700798423,10.9368979902719,6.85562362569129,10.1599528837742,9.92175473641128,12.172374819316,17.4651569455904,2.20231761998777,1.91531007127782,4.45458946443106,26.509143833769,17.7486028588675,21.3574481928272,2.23346399201105,3.37657566019008,5.04234217663473,17.3830865429464,8.96941589034349,19.3855423658313,0.454357159999104,0.68014404096107,0.289864488701678,0,0,0,0,0,0.702222100658759,1.36344258062446,0.259786004602869,0.35333957451034,1.26759077799012,0,2.54805239706646,0,0.216491041011214,0,0,0.5709193985953,0.517875767294343,0.148442139064825,2.77576522825817,3.95805121805784,1.84492397804847,1.20578112442098,1.05829836422134,0.125666591329675,0.494389935468748,0.289198713839823,16.8076004870476,1.61766849947409,2.87093973998512,5.81850303762267,0,6.14839673724249,7.95897485891129,0,0.718890747035522,0,0,4.04434726393021,3.20250421973039,10.9319286338192,3.30266208365325,1.02286182932132,2.90903262383384,2.75810147215188,3.36069900706044,3.35898820647251,0,1.47309299120532,7.54698569183682,5.0578462975364,8.64298223065676,6.0281927134286,5.57899293040888,7.04625461566674,6.65282244374075,4.65666067330228,3.88022387279116,3.9712276835242,4.22282697993477,3.5071317188412,4.17070873838397,0.696504333044333,1.4404749548556,1.79130840136644,0,0,0,2.07125772535502,3.04883877975425,0.540186184383045,1.18372367792605,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,2.10289948564127,9.46722433889417,0.330418782983798,0,3.19932375802851,4.18026009348789,2.83508414908605,1.4117846723634,0.667134131534611,1.52180500890047,0,0.164698954724011,0,0.397912944082302,0.58489226135736,0.898819408654221,0,0.199141273254367,1.13800740571849,2.28497025219458,2.25415471346161,2.44381593414377,1.55161989734101,1.19230893813542,0.758838445491087,0,0,0,0,21.8567088488083,15.7247196090562,12.8171404059367,20.0831520174618,10.8529721888588,6.87489799809833,7.76779571117189,7.13394997810156,3.84385978463314,2.87536413054709,1.48856379067401,0,0,0,0,0.369506380333209,3.03186258832776,1.95557971730431,1.52770577197669,0.938760993154008,0.167506257441816,0.714130922658041,0.390267295715598,0.945810864637146,2.87904096543407,0.956728611944923,0.327726629431476,0,0,0,0,0,0,2.0871576698413,2.46144541843627,0,0,1.89304931649754,1.95219372148319,3.87762115919038,0.955875191810208,0.891194696329576,0.849229592366497,1.61924280669958,2.33804686329049,3.16230222357219,1.28528526568723,0.425820255624806,3.5613120733451,3.90928702448583,1.31976098378028,0,1.94224508923985,2.41858845571801,0.943025398779491,2.06711325016541,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,4.86164953884538,2.97524972700335,4.28674070063185,3.54680467284547,4.10248280484762,3.62007845324666,2.74018454203139,0.704015124191131,0,0,0.16488625294148,0.807322133479528,0.482503399425247,0,0.164140899745061,0.582961673259701,2.03967832211561,12.6444451790411,2.68302928352189,6.11141940320049,19.0252141574738,18.0436380591753,11.4389086603261,0.339956859987711,0.279902904647316,0.414599921413271,0,5.3777118908793,3.65975040828328,2.48412283890143,0.836353184057875,1.74690050996942,1.07891477107857,0.578574190077352,0,0.129614973291793,0,0,2.0932316446157,2.48187735685646,1.16670713006429,2.19571699912143,1.68956125490778,1.76035857968631,0.911430693907651,0.419437377702843,0.241584120826006,0,0,1.21635129174099,1.1298205288131,0.77952493786677,0.895133478337407,0.993406773906324,0.360586348559907,0.738447635872886,0.302899349844443,0.381034033274999,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,1.00314420807073,1.6942555278512,3.68260189205742,4.01026859407578,2.749650917499,0,1.5107877947794,0,1.80128481289688,0,1.03552062350364,7.26511433089237,19.9512436700516,7.5122786531819,7.53630822911712,8.17491334249131,6.25067928730048,4.22268782823069,4.94484137373346,3.85103051510178,3.03236654116557,4.81610669791456,4.52703219326583,3.93294331373506,3.71345883948242,4.47996657853783,5.71552429539688,3.82418275618023,1.73618298417335,7.00546031365621,3.97437084362873,2.7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| |||
|short_description=p5@Samd14 | |||
}} |
Revision as of 09:32, 4 August 2015
Short description: | p5@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:883 |
Association with transcript: | -4bp_to_ENSMUST00000124735_5end |
EntrezGene: | 217125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.86e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.86e-13 | 23 |
neuron | 2.28e-10 | 33 |
neuronal stem cell | 2.28e-10 | 33 |
neuroblast | 2.28e-10 | 33 |
electrically signaling cell | 2.28e-10 | 33 |
electrically responsive cell | 1.06e-07 | 39 |
electrically active cell | 1.06e-07 | 39 |
neural cell | 1.16e-07 | 43 |
ectodermal cell | 1.41e-07 | 44 |
neurectodermal cell | 1.41e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.33e-15 | 64 |
neural plate | 1.33e-15 | 64 |
presumptive neural plate | 1.33e-15 | 64 |
central nervous system | 4.22e-12 | 73 |
regional part of nervous system | 4.95e-12 | 54 |
ecto-epithelium | 6.41e-12 | 73 |
pre-chordal neural plate | 9.78e-12 | 49 |
neural tube | 1.24e-11 | 52 |
neural rod | 1.24e-11 | 52 |
future spinal cord | 1.24e-11 | 52 |
neural keel | 1.24e-11 | 52 |
nervous system | 3.53e-11 | 75 |
ectoderm-derived structure | 2.46e-10 | 95 |
ectoderm | 2.46e-10 | 95 |
presumptive ectoderm | 2.46e-10 | 95 |
gray matter | 3.61e-09 | 34 |
regional part of brain | 5.49e-09 | 46 |
brain | 6.81e-09 | 47 |
future brain | 6.81e-09 | 47 |
anterior neural tube | 2.55e-08 | 40 |
structure with developmental contribution from neural crest | 3.45e-08 | 92 |
regional part of forebrain | 5.21e-08 | 39 |
forebrain | 5.21e-08 | 39 |
future forebrain | 5.21e-08 | 39 |