FFCP PHASE1:Mm9::chr9:100543944..100543961,+: Difference between revisions
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{{FFCP|EntrezGene=20842|HGNC=|MCL_coexpression_id=70|UniProt=Q8C918|association_with_transcript=-32bp_to_ENSMUST00000041595_5end|description=CAGE_peak_5_at_Stag1_5end|id=chr9:100543944..100543961,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.29e-09!18;UBERON:0005564!2.29e-09!18;UBERON:0004176!5.40e-09!17;UBERON:0009196!5.40e-09!17;UBERON:0009117!5.40e-09!17;UBERON:0000473!8.88e-08!14;UBERON:0003133!2.99e-07!24;UBERON:0003135!4.67e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.19e-15,14;UBERON:0004176,2.21e-14,17;UBERON:0009196,2.21e-14,17;UBERON:0009117,2.21e-14,17;UBERON:0003135,5.20e-14,15;UBERON:0000991,2.12e-13,18;UBERON:0005564,2.12e-13,18;UBERON:0003101,5.96e-13,16;UBERON:0000079,5.96e-13,16;UBERON:0003133,6.45e-11,24;UBERON:0005156,8.23e-10,26;UBERON:0000990,8.23e-10,26;UBERON:0002323,1.75e-09,37;UBERON:0004458,1.75e-09,37;UBERON:0003886,4.02e-09,38;UBERON:0002553,8.85e-09,39|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.437102012094987,0.333109761815663,1.01237633694913,2.79824751251259,0.157731082679119,0,0.84877930359606,2.04103896362567,0.198581902401771,0,0.799962113967033,0.22940928106717,0,0,0,0.380046838912748,0,0.443461021310609,0,1.23012957516914,0,0,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0.125896817975577,0.405507724878058,0.367093504323363,0.782391344348039,0,0,0.777719596297134,0,0,0.335565212115473,0,0.672187598284928,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0,1.0165335962074,0,0,0,0,0,0.384218305321555,0.622137673850866,0,0,0,0.220868540951614,0.61245399607477,0,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0,0,0.279182999001381,0,0.61119299110724,0,0.427115042397309,0,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0,0,0.60289056221049,2.11659672844269,0.251333182659351,1.23597483867187,0.433798070759735,0.884610551949874,1.13236794963186,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.449371918214468,0,0.251308704225729,0.695297280769106,0.767146371990992,0.62336413367868,0.486723789203273,0.916554274652847,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,0.459804208866946,0.360124259610698,0.753524089178575,0.680364991513279,0.896796041993948,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0.879755620819744,0,0.556094498451196,0.696504333044333,1.23469281844766,0.995171334092466,0.702213187313235,0.257347907114715,0.852490498186778,0.414251545071004,0.234526059981096,0.540186184383045,0.946978942340841,0.590292695242212,0.617068451549513,1.39520366850245,0,0.350296027101508,0.987359099480883,0.164167464079095,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,1.03093969057675,1.00841762311671,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,0.771494018793504,0.379419222745544,0.738050739898011,0.31399745568275,0.246794327843601,0,0.667380422864376,0.589676985339609,1.12431056192427,0.202860121388503,1.20588579876208,0.50925170356284,1.15078454980324,0.972811360650212,1.64736847912849,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0.369506380333209,0.947457058852424,1.14075483509418,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0.94652465824877,0.390438744296638,0,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.99358059645788,0.890328018336276,1.46598263418218,0.329940245945071,0,0.485561272309963,0.906970670894253,0.188605079755898,1.18120757152309,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,1.02131881726136,0,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,0.704015124191131,1.27099242518292,0.220528398054962,0,0.645857706783622,0.542816324353403,0.477489376012546,0.984845398470368,0.291480836629851,0.18542530201051,1.19609616558497,0.619160603889667,0.7407781094788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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20842 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C918 | |||
|association_with_transcript=-32bp_to_ENSMUST00000041595_5end | |||
|cluster_id=chr9:100543944..100543961,+ | |||
|description=CAGE_peak_5_at_Stag1_5end | |||
|id=chr9:100543944..100543961,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.29e-09!18;UBERON:0005564!2.29e-09!18;UBERON:0004176!5.40e-09!17;UBERON:0009196!5.40e-09!17;UBERON:0009117!5.40e-09!17;UBERON:0000473!8.88e-08!14;UBERON:0003133!2.99e-07!24;UBERON:0003135!4.67e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.19e-15,14;UBERON:0004176,2.21e-14,17;UBERON:0009196,2.21e-14,17;UBERON:0009117,2.21e-14,17;UBERON:0003135,5.20e-14,15;UBERON:0000991,2.12e-13,18;UBERON:0005564,2.12e-13,18;UBERON:0003101,5.96e-13,16;UBERON:0000079,5.96e-13,16;UBERON:0003133,6.45e-11,24;UBERON:0005156,8.23e-10,26;UBERON:0000990,8.23e-10,26;UBERON:0002323,1.75e-09,37;UBERON:0004458,1.75e-09,37;UBERON:0003886,4.02e-09,38;UBERON:0002553,8.85e-09,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0,0.34243593645101,0.0797721589953364,0.513602189793617,0.437102012094987,0.333109761815663,1.01237633694913,2.79824751251259,0.157731082679119,0,0.84877930359606,2.04103896362567,0.198581902401771,0,0.799962113967033,0.22940928106717,0,0,0,0.380046838912748,0,0.443461021310609,0,1.23012957516914,0,0,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0.588231488031014,0.683045484958446,1.45653105909346,0.125896817975577,0.405507724878058,0.367093504323363,0.782391344348039,0,0,0.777719596297134,0,0,0.335565212115473,0,0.672187598284928,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0,1.0165335962074,0,0,0,0,0,0.384218305321555,0.622137673850866,0,0,0,0.220868540951614,0.61245399607477,0,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0,0,0.279182999001381,0,0.61119299110724,0,0.427115042397309,0,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0.281686839553361,0,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.45673551887624,1.03575153458869,0.148442139064825,0.346970653532272,0,0,0.60289056221049,2.11659672844269,0.251333182659351,1.23597483867187,0.433798070759735,0.884610551949874,1.13236794963186,0.220841518460394,0,0,1.17112318804619,0.628340120440365,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.449371918214468,0,0.251308704225729,0.695297280769106,0.767146371990992,0.62336413367868,0.486723789203273,0.916554274652847,0.995255764880744,0.252722758433675,0.631325567659422,0.650602214813519,0.459804208866946,0.360124259610698,0.753524089178575,0.680364991513279,0.896796041993948,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0.879755620819744,0,0.556094498451196,0.696504333044333,1.23469281844766,0.995171334092466,0.702213187313235,0.257347907114715,0.852490498186778,0.414251545071004,0.234526059981096,0.540186184383045,0.946978942340841,0.590292695242212,0.617068451549513,1.39520366850245,0,0.350296027101508,0.987359099480883,0.164167464079095,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,0.210289948564127,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,1.03093969057675,1.00841762311671,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,0.771494018793504,0.379419222745544,0.738050739898011,0.31399745568275,0.246794327843601,0,0.667380422864376,0.589676985339609,1.12431056192427,0.202860121388503,1.20588579876208,0.50925170356284,1.15078454980324,0.972811360650212,1.64736847912849,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,0.369506380333209,0.947457058852424,1.14075483509418,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0.94652465824877,0.390438744296638,0,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.99358059645788,0.890328018336276,1.46598263418218,0.329940245945071,0,0.485561272309963,0.906970670894253,0.188605079755898,1.18120757152309,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,1.02131881726136,0,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,0.704015124191131,1.27099242518292,0.220528398054962,0,0.645857706783622,0.542816324353403,0.477489376012546,0.984845398470368,0.291480836629851,0.18542530201051,1.19609616558497,0.619160603889667,0.740778109478847,1.69531611304222,2.59719032669948,0.228778173206523,1.01987057996313,0,0.276399947608848,0,0.158167996790568,0.813277868507395,0.216010681643603,0.627264888043406,0.655087691238533,0.809186078308924,0.578574190077352,0.26175594198403,0.259229946583586,0,12.4012446510522,1.34564891439581,1.82004339502807,2.33341426012857,1.42075805825504,1.68956125490778,1.87771581833206,6.77062801188541,10.4859344425711,12.5623742829523,9.21696020025169,0.948033361884535,0.202725215290164,0.308132871494482,0.909445760844565,1.43221356533985,0.39736270956253,0.360586348559907,1.03382669022204,1.00966449948148,1.06689529317,0.806609481094724,0.194915761479505,0.577271049841977,0.233753804363138,0.226730383615211,0.665957860122194,1.16628013592318,1.34307693091263,0.386379188064381,0.375364950902364,0.183151624267265,0,0,0,0,0.572895513439397,0,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0.51776031175182,0.415149390336707,0.798049746802062,0.682934423016537,0.729320151204882,0.628839487883947,0.735374033800057,0.44449345560323,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| |||
|short_description=p5@Stag1 | |||
}} |
Revision as of 10:20, 4 August 2015
Short description: | p5@Stag1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Stag1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -32bp_to_ENSMUST00000041595_5end |
EntrezGene: | 20842 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.19e-15 | 14 |
external genitalia | 2.21e-14 | 17 |
indifferent external genitalia | 2.21e-14 | 17 |
indifferent gonad | 2.21e-14 | 17 |
male reproductive organ | 5.20e-14 | 15 |
gonad | 2.12e-13 | 18 |
gonad primordium | 2.12e-13 | 18 |
male organism | 5.96e-13 | 16 |
male reproductive system | 5.96e-13 | 16 |
reproductive organ | 6.45e-11 | 24 |
reproductive structure | 8.23e-10 | 26 |
reproductive system | 8.23e-10 | 26 |
body cavity | 1.75e-09 | 37 |
body cavity or lining | 1.75e-09 | 37 |
body cavity precursor | 4.02e-09 | 38 |
anatomical cavity | 8.85e-09 | 39 |