FFCP PHASE1:Mm9::chr10:4858303..4858340,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:4858303..4858340,+
|short_description=p@chr10:4858303..4858340,+
|description=CAGE_peak_at_chr10:4858303..4858340,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:4858303..4858340,+ | |||
|description=CAGE_peak_at_chr10:4858303..4858340,+ | |||
|id=chr10:4858303..4858340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!4.68e-13!49;UBERON:0000955!1.04e-12!50;UBERON:0006238!1.04e-12!50;UBERON:0001049!5.57e-12!52;UBERON:0005068!5.57e-12!52;UBERON:0006241!5.57e-12!52;UBERON:0007135!5.57e-12!52;UBERON:0002298!5.92e-11!6;UBERON:0001017!1.00e-10!73;UBERON:0005743!1.00e-10!73;UBERON:0000033!2.27e-10!63;UBERON:0000073!2.60e-10!75;UBERON:0001016!2.60e-10!75;UBERON:0002346!1.18e-08!71;UBERON:0003075!1.18e-08!71;UBERON:0007284!1.18e-08!71;UBERON:0004733!8.81e-08!6;UBERON:0004732!8.81e-08!6;UBERON:0002028!8.81e-08!6;UBERON:0007277!8.81e-08!6;UBERON:0003076!1.88e-07!12;UBERON:0003057!1.88e-07!12;UBERON:0004121!4.24e-07!102;UBERON:0000924!4.24e-07!102;UBERON:0006601!4.24e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,4.26e-24,6;UBERON:0004732,4.26e-24,6;UBERON:0002028,4.26e-24,6;UBERON:0007277,4.26e-24,6;UBERON:0001896,2.38e-18,2;UBERON:0002298,2.38e-18,2;UBERON:0005290,2.38e-18,2;UBERON:0010096,2.38e-18,2;UBERON:0003076,2.94e-12,12;UBERON:0003057,2.94e-12,12;UBERON:0000993,3.74e-10,1;UBERON:0002037,4.16e-10,4;UBERON:0002680,4.16e-10,4;UBERON:0001895,4.16e-10,4;UBERON:0010092,4.16e-10,4;UBERON:0006215,4.16e-10,4;UBERON:0002616,4.37e-09,46;UBERON:0000955,6.93e-09,47;UBERON:0006238,6.93e-09,47;UBERON:0001049,5.35e-08,52;UBERON:0005068,5.35e-08,52;UBERON:0006241,5.35e-08,52;UBERON:0007135,5.35e-08,52;UBERON:0000073,1.09e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.638436690425939,0.153606533256243,0,0,0,2.51264699101243,0,0.916789486660861,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,124.724619526919,191.643736734311,0,0,0,0,0.149790639404823,1.37250180845588,0,0.173824320192276,0,1.0389402227978,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,3.39913891117389,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0,2.63952196756057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.638436690425939,0.153606533256243,0,0,0,2.51264699101243,0,0.916789486660861,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,124.724619526919,191.643736734311,0,0,0,0,0.149790639404823,1.37250180845588,0,0.173824320192276,0,1.0389402227978,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,3.39913891117389,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0,2.63952196756057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:4858303..4858340,+ | |||
}} | }} |
Latest revision as of 10:29, 4 August 2015
Short description: | p@chr10:4858303..4858340, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:4858303..4858340, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 4.26e-24 | 6 |
segmental subdivision of nervous system | 4.26e-24 | 6 |
hindbrain | 4.26e-24 | 6 |
presumptive hindbrain | 4.26e-24 | 6 |
medulla oblongata | 2.38e-18 | 2 |
brainstem | 2.38e-18 | 2 |
myelencephalon | 2.38e-18 | 2 |
future myelencephalon | 2.38e-18 | 2 |
posterior neural tube | 2.94e-12 | 12 |
chordal neural plate | 2.94e-12 | 12 |
oviduct | 3.74e-10 | 1 |
cerebellum | 4.16e-10 | 4 |
regional part of metencephalon | 4.16e-10 | 4 |
metencephalon | 4.16e-10 | 4 |
future metencephalon | 4.16e-10 | 4 |
rhombic lip | 4.16e-10 | 4 |
regional part of brain | 4.37e-09 | 46 |
brain | 6.93e-09 | 47 |
future brain | 6.93e-09 | 47 |
neural tube | 5.35e-08 | 52 |
neural rod | 5.35e-08 | 52 |
future spinal cord | 5.35e-08 | 52 |
neural keel | 5.35e-08 | 52 |
regional part of nervous system | 1.09e-07 | 54 |