FFCP PHASE1:Mm9::chr11:96608388..96608420,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=249|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:96608388..96608420,+|id=chr11:96608388..96608420,+|ontology_enrichment_celltype=CL:0002612!9.12e-09!3;CL:0000117!5.20e-07!23;CL:0000337!5.20e-07!23|ontology_enrichment_celltype_v019_2=CL:0002612,1.65e-52,3;CL:0002611,1.42e-35,2;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!2.95e-15!6;UBERON:0005174!2.95e-15!6;UBERON:0001137!2.95e-15!6;UBERON:0001948!1.59e-13!5;UBERON:0002315!1.59e-13!5;UBERON:0003076!2.18e-09!12;UBERON:0003057!2.18e-09!12;UBERON:0002257!9.12e-09!3;UBERON:0002020!8.50e-08!34;UBERON:0000369!2.16e-07!5;UBERON:0002435!2.16e-07!5;UBERON:0000204!2.16e-07!5;UBERON:0010082!2.16e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.40e-86,5;UBERON:0002315,1.40e-86,5;UBERON:0002240,2.48e-72,6;UBERON:0005174,2.48e-72,6;UBERON:0001137,2.48e-72,6;UBERON:0002257,1.65e-52,3;UBERON:0003076,1.18e-36,12;UBERON:0003057,1.18e-36,12;UBERON:0002256,1.42e-35,2;UBERON:0000489,2.63e-21,21;UBERON:0002020,1.96e-13,34;UBERON:0003103,9.33e-11,43;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,3.75476519617743,0.367472397644862,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,2.65165726926301,3.55929201997757,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.376963056338593,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr11:96608388..96608420,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:96608388..96608420,+ | |||
|description=CAGE_peak_at_chr11:96608388..96608420,+ | |||
|id=chr11:96608388..96608420,+ | |||
|ontology_enrichment_celltype=CL:0002612!9.12e-09!3;CL:0000117!5.20e-07!23;CL:0000337!5.20e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.65e-52,3;CL:0002611,1.42e-35,2;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!2.95e-15!6;UBERON:0005174!2.95e-15!6;UBERON:0001137!2.95e-15!6;UBERON:0001948!1.59e-13!5;UBERON:0002315!1.59e-13!5;UBERON:0003076!2.18e-09!12;UBERON:0003057!2.18e-09!12;UBERON:0002257!9.12e-09!3;UBERON:0002020!8.50e-08!34;UBERON:0000369!2.16e-07!5;UBERON:0002435!2.16e-07!5;UBERON:0000204!2.16e-07!5;UBERON:0010082!2.16e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.40e-86,5;UBERON:0002315,1.40e-86,5;UBERON:0002240,2.48e-72,6;UBERON:0005174,2.48e-72,6;UBERON:0001137,2.48e-72,6;UBERON:0002257,1.65e-52,3;UBERON:0003076,1.18e-36,12;UBERON:0003057,1.18e-36,12;UBERON:0002256,1.42e-35,2;UBERON:0000489,2.63e-21,21;UBERON:0002020,1.96e-13,34;UBERON:0003103,9.33e-11,43;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,3.75476519617743,0.367472397644862,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,2.65165726926301,3.55929201997757,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0.376963056338593,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0,0,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:96608388..96608420,+ | |||
}} |
Latest revision as of 10:49, 4 August 2015
Short description: | p@chr11:96608388..96608420, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96608388..96608420, + |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.65e-52 | 3 |
neuron of the dorsal spinal cord | 1.42e-35 | 2 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.40e-86 | 5 |
gray matter of spinal cord | 1.40e-86 | 5 |
spinal cord | 2.48e-72 | 6 |
dorsal region element | 2.48e-72 | 6 |
dorsum | 2.48e-72 | 6 |
ventral horn of spinal cord | 1.65e-52 | 3 |
posterior neural tube | 1.18e-36 | 12 |
chordal neural plate | 1.18e-36 | 12 |
dorsal horn of spinal cord | 1.42e-35 | 2 |
cavitated compound organ | 2.63e-21 | 21 |
gray matter | 1.96e-13 | 34 |
compound organ | 9.33e-11 | 43 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |