FFCP PHASE1:Mm9::chr10:60394784..60394798,+: Difference between revisions
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|id=chr10:60394784..60394798,+
|short_description=p2@uc007ffh.1
|description=CAGE_peak_2_at_uc007ffh.1_5end
|association_with_transcript=45bp_to_uc007ffh.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1899 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_uc007ffh.1_5end | |||
|cluster_id=chr10:60394784..60394798,+ | |||
|description=CAGE_peak_2_at_uc007ffh.1_5end | |||
|id=chr10:60394784..60394798,+ | |||
|ontology_enrichment_celltype=CL:0000049!4.59e-07!19;CL:0000557!5.45e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.57e-21,3;CL:0002540,4.57e-21,3;CL:0002320,3.74e-20,46;CL:0000134,3.74e-20,46;CL:0000219,5.21e-17,54;CL:0000557,9.93e-16,7;CL:0002476,5.57e-15,2;CL:0000988,7.13e-13,32;CL:0002032,7.13e-13,32;CL:0000037,7.13e-13,32;CL:0000837,7.13e-13,32;CL:0000049,2.14e-12,19;CL:0000723,1.29e-09,91;CL:0000048,1.29e-09,91;CL:0000034,6.08e-09,97;CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1;CL:0002194,6.11e-08,4;CL:0000766,6.11e-08,4;CL:0000234,6.11e-08,4;CL:0000576,6.11e-08,4;CL:0000235,6.11e-08,4;CL:0000864,6.11e-08,4;CL:0002009,6.11e-08,4;CL:0000040,6.11e-08,4;CL:0000559,6.11e-08,4;CL:0000763,5.05e-07,16;CL:0000738,7.02e-07,17;CL:0002087,7.02e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.37e-09!16;UBERON:0002390!4.94e-07!45;UBERON:0003061!4.94e-07!45;UBERON:0002193!6.34e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.79e-20,16;UBERON:0002384,3.74e-20,46;UBERON:0001474,1.23e-14,22;UBERON:0004765,1.23e-14,22;UBERON:0001434,1.23e-14,22;UBERON:0002204,6.52e-10,32;UBERON:0002193,2.23e-08,48;UBERON:0002405,2.23e-08,48;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1;UBERON:0000029,3.50e-08,1;UBERON:0001097,3.50e-08,1;UBERON:0003968,3.50e-08,1;UBERON:0001467,3.50e-08,1;UBERON:0002390,6.86e-07,45;UBERON:0003061,6.86e-07,45 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.788655413395594,0.959801035240171,0,0,4.66667470644161,7.05239430675126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,3.1496490104849,5.93319817540185,2.8419204597844,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,3.47837386442013,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,3.36619248741323,0.742210695324124,0,0,0,0,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,1.90605340609597,0,0,0,0,0,0.41557608911912,0.162241263067758,0.203678727700633,0.497627882440372,0.505445516867349,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.823128545631774,0,2.80885274925294,1.02939162845886,0.568326998791185,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0,0.439100230582101,0.671032093801859,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0.581857461502877,0.350679099451593,0.442655759869801,0.295220295959204,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.469380496577004,0,0.238043640886014,0,0,0.44292937929755,0,0.81931657357869,0.345369963731791,0,7.53956419696361,3.26343410291226,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.824850614862677,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.8244312647074,0.484393280087717,0.0603129249281559,0.238744688006273,0,0,0,0.170870880797853,0,0.740778109478847,0,0,0.457556346413045,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.821687657318618,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0,0.201652370273681,0,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.256100609619477,0,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0,0.409231043169689,0,0,0,0.467863216890817,0,0.191288332068843,0,0 | ||
|short_description=p2@uc007ffh.1 | |||
}} | }} |
Latest revision as of 13:11, 4 August 2015
Short description: | p2@uc007ffh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc007ffh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1899 |
Association with transcript: | 45bp_to_uc007ffh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.57e-21 | 3 |
mesenchymal stem cell of the bone marrow | 4.57e-21 | 3 |
connective tissue cell | 3.74e-20 | 46 |
mesenchymal cell | 3.74e-20 | 46 |
motile cell | 5.21e-17 | 54 |
granulocyte monocyte progenitor cell | 9.93e-16 | 7 |
bone marrow macrophage | 5.57e-15 | 2 |
hematopoietic cell | 7.13e-13 | 32 |
hematopoietic oligopotent progenitor cell | 7.13e-13 | 32 |
hematopoietic stem cell | 7.13e-13 | 32 |
hematopoietic multipotent progenitor cell | 7.13e-13 | 32 |
common myeloid progenitor | 2.14e-12 | 19 |
somatic stem cell | 1.29e-09 | 91 |
multi fate stem cell | 1.29e-09 | 91 |
stem cell | 6.08e-09 | 97 |
lining cell | 2.98e-08 | 1 |
meso-epithelial cell | 2.98e-08 | 1 |
endothelial cell | 2.98e-08 | 1 |
endothelial cell of sinusoid | 2.98e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.98e-08 | 1 |
monopoietic cell | 6.11e-08 | 4 |
myeloid leukocyte | 6.11e-08 | 4 |
phagocyte | 6.11e-08 | 4 |
monocyte | 6.11e-08 | 4 |
macrophage | 6.11e-08 | 4 |
tissue-resident macrophage | 6.11e-08 | 4 |
macrophage dendritic cell progenitor | 6.11e-08 | 4 |
monoblast | 6.11e-08 | 4 |
promonocyte | 6.11e-08 | 4 |
myeloid cell | 5.05e-07 | 16 |
leukocyte | 7.02e-07 | 17 |
nongranular leukocyte | 7.02e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.79e-20 | 16 |
connective tissue | 3.74e-20 | 46 |
bone element | 1.23e-14 | 22 |
skeletal element | 1.23e-14 | 22 |
skeletal system | 1.23e-14 | 22 |
musculoskeletal system | 6.52e-10 | 32 |
hemolymphoid system | 2.23e-08 | 48 |
immune system | 2.23e-08 | 48 |
bile duct | 2.98e-08 | 1 |
hepatic sinusoid | 2.98e-08 | 1 |
parenchyma | 2.98e-08 | 1 |
abdomen blood vessel | 2.98e-08 | 1 |
sinusoid | 2.98e-08 | 1 |
digestive system duct | 2.98e-08 | 1 |
abdominal segment blood vessel | 2.98e-08 | 1 |
trunk blood vessel | 2.98e-08 | 1 |
liver parenchyma | 2.98e-08 | 1 |
liver lobule | 2.98e-08 | 1 |
biliary system | 2.98e-08 | 1 |
biliary tree | 2.98e-08 | 1 |
biliary bud | 2.98e-08 | 1 |
hepatic duct | 2.98e-08 | 1 |
lymph node | 3.50e-08 | 1 |
axillary lymph node | 3.50e-08 | 1 |
peripheral lymph node | 3.50e-08 | 1 |
shoulder | 3.50e-08 | 1 |
hematopoietic system | 6.86e-07 | 45 |
blood island | 6.86e-07 | 45 |