FFCP PHASE1:Mm9::chr4:116230273..116230329,+: Difference between revisions
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{{FFCP|EntrezGene=77110|HGNC=|UniProt=B1AU79,Q6NZP2|association_with_transcript=-2bp_to_NM_029868,uc008ugr.1_5end|description=CAGE_peak_1_at_Gpbp1l1_5end|id=chr4:116230273..116230329,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.96e-15!130;UBERON:0000925!5.96e-15!130;UBERON:0006595!5.96e-15!130;UBERON:0001007!1.87e-14!128;UBERON:0001555!1.87e-14!128;UBERON:0007026!1.87e-14!128;UBERON:0004921!1.95e-13!126;UBERON:0004185!1.95e-13!126;UBERON:0005911!8.26e-08!69;UBERON:0003929!2.09e-07!55;UBERON:0000077!3.57e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.31e-15,118;UBERON:0000925,2.31e-15,118;UBERON:0006595,2.31e-15,118;UBERON:0001007,7.19e-15,116;UBERON:0001555,7.19e-15,116;UBERON:0007026,7.19e-15,116;UBERON:0004921,7.85e-14,114;UBERON:0005911,8.26e-08,69;UBERON:0003929,2.09e-07,55;UBERON:0000160,4.09e-07,31;UBERON:0005409,8.43e-07,47|phase1_expression=14.4133962394315,25.126229350034,22.7499619694768,32.9685990324445,29.0519523368881,17.1236857350128,15.8856595604957,30.473104332212,11.403886494285,7.2560003159818,14.5535272991679,11.2478744183424,25.5089087597497,28.9361532006881,11.9919514253639,32.3960427823721,30.7807226376385,26.1833597247337,29.3424887916281,24.1902101524877,16.5834415794586,13.7021512657222,22.9855814442263,31.8384921358879,27.7585230091276,21.2465826722557,18.5227658348402,17.453169847557,40.665011763664,25.2030129759931,18.181901873735,10.7955214488137,5.53558308826113,15.8481681015439,12.4206196493048,12.6338330472454,14.9043630071529,24.6933662134776,21.0960543021426,32.9819958703493,38.8232782100469,36.2014107027976,33.5002143591496,5.03587271902309,6.9950082541465,7.15832333430558,3.9119567217402,6.1047043786525,9.00713349211335,9.3326351555656,9.51907667052465,2.87505128729943,26.5096517571223,20.3101399763176,27.8957853288245,9.51859913333004,10.601737277734,9.7977697532714,7.08107613008592,4.7609188134483,6.33831403506179,5.76035704517525,2.66788438833342,4.49949858640699,2.96659908770092,4.2628806896766,3.89480143673926,3.07374644257244,8.70992743391212,8.10035629990144,7.78202357000113,7.7125765789027,5.74258206474195,8.32937434661688,10.0637744569148,7.35375029288017,11.0115880999389,14.0456071893706,12.2885226604995,9.89147157976454,8.78281378583133,10.4182674111352,12.0048689570594,7.31591393041184,11.1542720877071,5.00868595305235,5.55249555116501,6.52398060388552,12.6462742866417,16.0967423027453,28.1168554040627,20.6501730475533,12.2394840067395,14.5719861742211,25.3412802804591,31.3618820968135,17.6959969366007,8.18065548374677,6.75443611967459,3.88673531961374,11.8308472612412,10.2661181931454,15.2883143823987,21.3320010945999,13.2059535016841,14.4415123320806,11.1215377903252,23.4076953424073,36.7691794778984,13.8051189330287,7.11289839741157,5.48037860961854,7.61031140944993,9.64624899536784,13.5227013206061,14.2003248202533,14.8316980640624,26.0278842455841,20.3460426948471,12.9413479957927,15.6797478106879,15.5160081003271,24.2309289583559,14.3462590535658,13.1951425292477,26.3120766864849,13.0598485711453,10.1983464268879,17.9169020173021,14.2301107434582,9.60751265919116,12.4397808591736,16.5133104182663,12.2743419518559,11.8439185398949,10.707923362472,15.4795833052481,20.6515571212754,15.4160882644542,23.3590460033986,11.1903580947925,5.51765050640335,8.82304436046211,10.3986324306643,15.9205408014107,15.5017601544668,14.4300655821982,16.557015727297,13.7963515477019,11.535470890237,15.1317966780996,11.6173738186615,11.6779844674751,10.7958171621872,12.1411460480687,10.5488161413801,11.937624184325,14.411482798424,10.7982129770325,9.32065976409758,10.5536726991493,9.18316513451176,9.94327889457883,11.215561209602,13.4212388212019,11.39416329277,11.5357562601836,20.0836388871532,12.5065485934245,17.7300861205423,17.9162069096341,15.3509986796599,17.344459107993,17.4468344388483,10.3042074796422,11.1136981369627,37.0069036941854,18.7759902331116,8.95810652247983,8.59275685883622,12.2424088255989,16.7397325437374,18.0126215514345,15.5985013412299,22.302865892592,18.2815839743652,20.8608223304224,23.4768637008558,18.1316601020782,29.6610404855893,23.5590474363417,30.4686148079182,16.1217715810119,11.8818453114118,10.1436962105772,10.997171703647,10.4734343070518,17.3235475129087,16.3782631151826,20.9606410131035,24.3348028154131,20.3605320470971,21.3445891502747,13.6812986687197,13.3660116676978,13.4917267430912,15.2145091041377,15.9176925436595,14.7682994033223,16.1109836972454,21.2397147075296,17.5719304440372,18.6898668485561,14.8856379067401,14.0416952901552,19.9537313578218,18.1191387657131,26.5343936749852,23.2789019609922,7.01118223550794,11.8964432802679,11.5426658327128,11.7345124144251,16.5831194867398,16.4250112211349,15.6106918286239,15.2906089783005,17.0527811029557,18.337298395611,18.3526912481627,17.4411831684555,22.1313059629713,21.1107797514981,23.3879444042045,18.1952781017043,17.9358885098076,15.89450840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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77110 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AU79,uniprot:Q6NZP2 | |||
|association_with_transcript=-2bp_to_NM_029868,uc008ugr.1_5end | |||
|cluster_id=chr4:116230273..116230329,+ | |||
|description=CAGE_peak_1_at_Gpbp1l1_5end | |||
|id=chr4:116230273..116230329,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.96e-15!130;UBERON:0000925!5.96e-15!130;UBERON:0006595!5.96e-15!130;UBERON:0001007!1.87e-14!128;UBERON:0001555!1.87e-14!128;UBERON:0007026!1.87e-14!128;UBERON:0004921!1.95e-13!126;UBERON:0004185!1.95e-13!126;UBERON:0005911!8.26e-08!69;UBERON:0003929!2.09e-07!55;UBERON:0000077!3.57e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.31e-15,118;UBERON:0000925,2.31e-15,118;UBERON:0006595,2.31e-15,118;UBERON:0001007,7.19e-15,116;UBERON:0001555,7.19e-15,116;UBERON:0007026,7.19e-15,116;UBERON:0004921,7.85e-14,114;UBERON:0005911,8.26e-08,69;UBERON:0003929,2.09e-07,55;UBERON:0000160,4.09e-07,31;UBERON:0005409,8.43e-07,47 | |||
|phase1_expression=14.4133962394315,25.126229350034,22.7499619694768,32.9685990324445,29.0519523368881,17.1236857350128,15.8856595604957,30.473104332212,11.403886494285,7.2560003159818,14.5535272991679,11.2478744183424,25.5089087597497,28.9361532006881,11.9919514253639,32.3960427823721,30.7807226376385,26.1833597247337,29.3424887916281,24.1902101524877,16.5834415794586,13.7021512657222,22.9855814442263,31.8384921358879,27.7585230091276,21.2465826722557,18.5227658348402,17.453169847557,40.665011763664,25.2030129759931,18.181901873735,10.7955214488137,5.53558308826113,15.8481681015439,12.4206196493048,12.6338330472454,14.9043630071529,24.6933662134776,21.0960543021426,32.9819958703493,38.8232782100469,36.2014107027976,33.5002143591496,5.03587271902309,6.9950082541465,7.15832333430558,3.9119567217402,6.1047043786525,9.00713349211335,9.3326351555656,9.51907667052465,2.87505128729943,26.5096517571223,20.3101399763176,27.8957853288245,9.51859913333004,10.601737277734,9.7977697532714,7.08107613008592,4.7609188134483,6.33831403506179,5.76035704517525,2.66788438833342,4.49949858640699,2.96659908770092,4.2628806896766,3.89480143673926,3.07374644257244,8.70992743391212,8.10035629990144,7.78202357000113,7.7125765789027,5.74258206474195,8.32937434661688,10.0637744569148,7.35375029288017,11.0115880999389,14.0456071893706,12.2885226604995,9.89147157976454,8.78281378583133,10.4182674111352,12.0048689570594,7.31591393041184,11.1542720877071,5.00868595305235,5.55249555116501,6.52398060388552,12.6462742866417,16.0967423027453,28.1168554040627,20.6501730475533,12.2394840067395,14.5719861742211,25.3412802804591,31.3618820968135,17.6959969366007,8.18065548374677,6.75443611967459,3.88673531961374,11.8308472612412,10.2661181931454,15.2883143823987,21.3320010945999,13.2059535016841,14.4415123320806,11.1215377903252,23.4076953424073,36.7691794778984,13.8051189330287,7.11289839741157,5.48037860961854,7.61031140944993,9.64624899536784,13.5227013206061,14.2003248202533,14.8316980640624,26.0278842455841,20.3460426948471,12.9413479957927,15.6797478106879,15.5160081003271,24.2309289583559,14.3462590535658,13.1951425292477,26.3120766864849,13.0598485711453,10.1983464268879,17.9169020173021,14.2301107434582,9.60751265919116,12.4397808591736,16.5133104182663,12.2743419518559,11.8439185398949,10.707923362472,15.4795833052481,20.6515571212754,15.4160882644542,23.3590460033986,11.1903580947925,5.51765050640335,8.82304436046211,10.3986324306643,15.9205408014107,15.5017601544668,14.4300655821982,16.557015727297,13.7963515477019,11.535470890237,15.1317966780996,11.6173738186615,11.6779844674751,10.7958171621872,12.1411460480687,10.5488161413801,11.937624184325,14.411482798424,10.7982129770325,9.32065976409758,10.5536726991493,9.18316513451176,9.94327889457883,11.215561209602,13.4212388212019,11.39416329277,11.5357562601836,20.0836388871532,12.5065485934245,17.7300861205423,17.9162069096341,15.3509986796599,17.344459107993,17.4468344388483,10.3042074796422,11.1136981369627,37.0069036941854,18.7759902331116,8.95810652247983,8.59275685883622,12.2424088255989,16.7397325437374,18.0126215514345,15.5985013412299,22.302865892592,18.2815839743652,20.8608223304224,23.4768637008558,18.1316601020782,29.6610404855893,23.5590474363417,30.4686148079182,16.1217715810119,11.8818453114118,10.1436962105772,10.997171703647,10.4734343070518,17.3235475129087,16.3782631151826,20.9606410131035,24.3348028154131,20.3605320470971,21.3445891502747,13.6812986687197,13.3660116676978,13.4917267430912,15.2145091041377,15.9176925436595,14.7682994033223,16.1109836972454,21.2397147075296,17.5719304440372,18.6898668485561,14.8856379067401,14.0416952901552,19.9537313578218,18.1191387657131,26.5343936749852,23.2789019609922,7.01118223550794,11.8964432802679,11.5426658327128,11.7345124144251,16.5831194867398,16.4250112211349,15.6106918286239,15.2906089783005,17.0527811029557,18.337298395611,18.3526912481627,17.4411831684555,22.1313059629713,21.1107797514981,23.3879444042045,18.1952781017043,17.9358885098076,15.8945084087914,14.8858841972098,10.1639666133539,16.1581393410799,5.04813151066011,7.41833614163613,8.83235930704476,8.36390792833932,10.2487390077901,11.3230612315533,10.9298889452221,7.59865230569411,13.0444966722353,12.2102100240287,12.6326675835359,12.8207234640424,22.8041743095006,13.857490329693,26.5490276679926,9.71122544619926,8.16273603804828,13.9567759019365,12.6979813938732,13.2197113615889,16.0225541764297,15.2684166380552,15.329387270543,14.8537276229834,10.5418608574999,24.7525303795648,27.235168460303,10.443543453816,9.31382523235832,10.2881776815164,19.3300854670078,9.45354733290974,12.0120785039548,8.52501857520878,19.2430800612242,17.1583977399694,18.9654422327267,18.4672603294458,28.5792035251753,20.3857686257167,17.0702451924485,18.0554989719567,25.358832786797,18.17167959703,19.9918930533488,9.49379592630823,14.2599786074678,19.4019510714832,25.1517379006686,17.3871411636957,20.5673900292565,16.0944170172207,19.7625962540326,14.3200592702267,11.2299277721303,1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| |||
|short_description=p1@Gpbp1l1 | |||
}} |
Revision as of 14:33, 4 August 2015
Short description: | p1@Gpbp1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpbp1l1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_NM_029868, uc008ugr.1_5end |
EntrezGene: | 77110 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.31e-15 | 118 |
endoderm | 2.31e-15 | 118 |
presumptive endoderm | 2.31e-15 | 118 |
digestive system | 7.19e-15 | 116 |
digestive tract | 7.19e-15 | 116 |
primitive gut | 7.19e-15 | 116 |
subdivision of digestive tract | 7.85e-14 | 114 |
endo-epithelium | 8.26e-08 | 69 |
gut epithelium | 2.09e-07 | 55 |
intestine | 4.09e-07 | 31 |
gastrointestinal system | 8.43e-07 | 47 |